Contig 006854:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003K05Sequence531001551 (12)ref|XP_009771504.1|3e-68PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X2 [Nicot251006854 (10)
JMFF003O16Sequence491001551 (12)ref|XP_009771504.1|1e-48PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X2 [Nicot358006854 (10)
JMFF006J01Sequence471001551 (12)ref|XP_009771502.1|1e-51PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X1 [Nicot251006854 (10)
JMFF022A20Sequence407001551 (12)ref|XP_009618839.1|2e-40PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment659006854 (10)ref|XP_009767983.1|4e-64PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves
JMFF024B16Sequence422001551 (12)ref|XP_009618839.1|3e-41PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment250006854 (10)
JMFF027K08Sequence711006854 (10)ref|XP_009767983.1|8e-79PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves
JMFF030P05Sequence506001551 (12)ref|XP_009771502.1|2e-62PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X1 [Nicot254006854 (10)
JMFF042E09Sequence662001551 (12)ref|XP_009618839.1|1e-86PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment496006854 (10)ref|XP_009767983.1|7e-34PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves
JMSF050E19Sequence692001551 (12)ref|XP_009618839.1|3e-101PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment690006854 (10)ref|XP_009767983.1|2e-93PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves
JMSF051F05Sequence687001551 (12)ref|XP_009618839.1|2e-102PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment690006854 (10)ref|XP_009767983.1|1e-95PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves

Alignment

This contig is upended


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rJMSF050E19+                                                          CCTCAACACCCC
rJMSF051F05+                                                           CTCAACACCCC
                      ____________________________________________________________
consensus                                                             CCTCAACACCCC
 
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rJMSF050E19+          CTGTCTCCCATGGGTGATGCCTGCTCAAGAATGGATCTCACAGCAATTCATCAGATTCTG
rJMSF051F05+          CTGTCTCCCATGGGTGATGCCTGCTCAAGAATGGATCTCACAGCAATTCATCAGATTCTG
rJMFF027K08+                                                         TCATCAGATTNTG
                      ____________________________________________________________
consensus             CTGTCTCCCATGGGTGATGCCTGCTCAAGAATGGATCTCACAGCAATTCATCAGATTCTG
 
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rJMSF050E19+          GTAATGACTCNCTACAAAGATGATGTAGGAACAAATGAGTTATCTTTCCAAGAGTGGACT
rJMSF051F05+          GTAATGACTCACTACAAAGATGATGTAGGAACAAATGAGTTATCTTTCCNAGAGTGGACT
rJMFF027K08+          GTAATGACTCCCTNCAAAGATGATGAAGGAACAAATGAGTTNTCTTTCCAAGAGTGGACT
                      ____________________________________________________________
consensus             GTAATGACTCCCTACAAAGATGATGTAGGAACAAATGAGTTATCTTTCCAAGAGTGGACT
 
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rJMSF050E19+          CAACAAATGAGGGATATGTTGGAGGCAAGGAAGCGTGGTGACTTGGCNTTCCGGGACAAG
rJMSF051F05+          CAACAAATGAGGGATATGTTGGAGGCAAGGAAGCGTGGTGACTTGGCNTTCCGGGACAAG
rJMFF027K08+          CAACAAATGAGGGATATGTTGGAGGCAAGGAAGNGTGGTGACTTGGCATTCCGGGACAAG
rJMFF022A20+          CAACAAATGAGGGATATGTTGGAGGCAAGGAAGCGTGGTGACTTGGCATTCCGGGACAAG
                      ____________________________________________________________
consensus             CAACAAATGAGGGATATGTTGGAGGCAAGGAAGCGTGGTGACTTGGCATTCCGGGACAAG
 
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rJMSF050E19+          GAATTCAAAACTGCCATAGATTGTTATTNTCNGTTCATAGATGTGGGTACAATGGTATCC
rJMSF051F05+          GAATTCAAAACTGCCNTAGATTGTTATTNTCAGTTCATAGATGTGGGTACAATGGTATCC
rJMFF027K08+          GAATTCAAAACTGCCATAGATTGTTATTNTCAGTTCATAGATGTGGGTACAATGGTATCC
rJMFF022A20+          GAATTCAAAACTGCCATAGATTGTTATTTTCAGTTCATAGATGTGGGTACAATGGTATCC
                      ____________________________________________________________
consensus             GAATTCAAAACTGCCATAGATTGTTATTTTCAGTTCATAGATGTGGGTACAATGGTATCC
 
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rJMSF050E19+          CCAACNGTGTATGCNCGGAGGAGCCTGTGTTACNTCATGTGCGATCAGCCNGATGCAGCT
rJMSF051F05+          CCAACNGTGTATGCNCGGAGGAGCCTGTGTTACATCATGTGCGATCAGCCNGATGCAGCT
rJMFF027K08+          CCAACAGTGTATGCNCGGAGGAGCCTGTGTTACATCATGTGCGATCAGCCAGATGCAGCT
rJMFF042E09+                         CGGAGGAGCCTGTGTTACATCATGTGCGATCAGCCAGATGCAGCT
rJMFF022A20+          CCAACAGTGTATGCNCGGAGGAGCCTGTGTTACATCATGTGCGATCAGCCAGATGCAGCT
                      ____________________________________________________________
consensus             CCAACAGTGTATGCNCGGAGGAGCCTGTGTTACATCATGTGCGATCAGCCAGATGCAGCT
 
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rJMSF050E19+          TTTCGAGATGCAATGCNGGCGCAATGTGTGTACCCNGACTGGTCAACCGCNTTTTATATG
rJMSF051F05+          TTTCGAGATGCAATGCNGGCGCAATGTGTGTACCCNGACTGGTCAACCGCNTTTTATATG
rJMFF027K08+          TTTNGAGATGCAATGCAGGNGCAATGTGTGTACCCAGACTGGTCAACCGCATTTTATATG
rJMFF042E09+          CTTCGAGATGCAATGCAGGCGCAATGTGTGTACCCAGACTGGTCAACCGCATTTTATATG
rJMFF022A20+          TTTNGAGATGCAATGCAGGNGCAATGTGTGTACCCAGACTGGTCAACCGCATTTTATATG
                      ____________________________________________________________
consensus             TTTCGAGATGCAATGCAGGCGCAATGTGTGTACCCAGACTGGTCAACCGCATTTTATATG
 
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rJMSF050E19+          CNGGCNGTTGCGCTGTCAAAGCTAGACNTGCNCAAAGATGCAGCGGATATGTTGAACGAG
rJMSF051F05+          CAGGCAGTTGCGCTGTCAAAGCTAGACATGCNCAAAGATGCAGCGGATATGTTGAACGAG
rJMFF027K08+          CAGGCAGTTGCGCTGTCAAAGCTAGACATGCNCAAAGATGCAGCGGATATGTTGAACGAG
rJMFF003O16+                                          CAAAGATGCAGCGGATATGTTGAACGAG
rJMFF042E09+          CAGGCAGTTGCGCTGTCAAAGCTAGACATGCACAAAGATGCAGCGGATATGTTGAACGAG
rJMFF022A20+          CAGGCAGTTGCGCTGTCAAAGCTAGACATGCNCAAAGATGCAGCGGATATGTTGAACGAG
                      ____________________________________________________________
consensus             CAGGCAGTTGCGCTGTCAAAGCTAGACATGCACAAAGATGCAGCGGATATGTTGAACGAG
 
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rJMSF050E19+          GCTTCCCCNTTAGAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATGATGTTGAGAG
rJMSF051F05+          GCTTCCNCNTTAGAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATGATGTTGAGAG
rJMFF027K08+          GCTTCCNCATTAGAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATGATGTTGAGAG
rJMFF003O16+          GCTTCCNCNTTAGAAGAGAAGCGGCAAAAGGGCGGAAGNGGATGAGGATGANNTTGAGNG
rJMFF042E09+          GCTTCCACATTAGAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATGATGTTGAGAG
rJMFF024B16+                      GAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATNATGTTGAGAG
rJMFF003K05+                    TAGAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATNATGTTGAGAG
rJMFF030P05+                   TTAGAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATNATGTTGAGAG
rJMFF006J01+                      GAAGNGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATNATGNTGAGAG
rJMFF022A20+          GCTTCCNCATTAGAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATGATGTTGAGAG
                      ____________________________________________________________
consensus             GCTTCCCCATTAGAAGAGAAGCGGCAAAAGGGCGGAAGAGGATGAGGATGATGTTGAGAG
 
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rJMSF050E19+          AGACNCTGTCTTGAGAAGAAAGATTAATCTGTTTATTCTTTTGTAGCCCTGCCCTGAAAT
rJMSF051F05+          AGACNCTGTCTTGAGAAGAAAGATTAATCTGTTTATTCTTTTGTAGCCNTGCCCTGAAAT
rJMFF027K08+          AGACNCTGTNTTGAGAAGAAAGATTAATNTGCTTATTNTTTTGTAGCCATGCCATGAAAT
rJMFF003O16+          AGACCCTGTNTTGAGAAGAAAGANTNATCNGTTTATTCTTTTGTAGCCATGCCATGAAAT
rJMFF042E09+          AGACACTGTCTTGAGAAGAAAGATTAATCTGTTTATTCTTTTGTAGCCATGCCATGAAAT
rJMFF024B16+          AGACNCTGTNTTGAGAAGAAAGATTAATNTGTTTATTTTTTTGTANCCATGCCANGAAAN
rJMFF003K05+          AGACNCTGTNTTGAGAAGAAAGATTAATNTGTTTATTNTTTTGTANCCATGCCANGAAAN
rJMFF030P05+          AGACNCTGTNTTGAGAAGAAAGATTAATNTGTTTATTNTTTTGTANCCATGCCANGAAAN
rJMFF006J01+          AGACNCTGTNTTGAGAAGAAAGANTAATNTGTTTNTTNTTTTGTANCCNTGCCNTGAAAT
rJMFF022A20+          AGACNCTGTNTTGAGAAGAAAGATTAATNTGTTTATTNTTTTGTAGCCATGCCATGAAAT
                      ____________________________________________________________
consensus             AGACCCTGTCTTGAGAAGAAAGATTAATCTGTTTATTCTTTTGTAGCCATGCCATGAAAT
 
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rJMSF050E19+          GCCTCGGTAAATTGTTGTT-AAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
rJMSF051F05+          GCCTCGGTAAATTGTTGTT-AAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
rJMFF027K08+          GCCTCGTTAAATTGTTGTT-AAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
rJMFF003O16+          GCCTCGGTAAATTGTTGTTAAAAAAAAAAATCAAAAAAATCACATAAGATGGTGCTGTAT
rJMFF042E09+          GCCTCGGTAAATTGTTGTT-AAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
rJMFF024B16+          GCCTCGGTAAATTGTTGNTAAAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
rJMFF003K05+          GCCTCGGTAAATTGTTGNTAAAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
rJMFF030P05+          GCCTCGGTAAATTGTTGNTAAAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
rJMFF006J01+          NCCTCGGTAAATTGTTGNTAAAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
rJMFF022A20+          GCCTCGGTAAATTGTTGTT-AAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
                      ____________________________________________________________
consensus             GCCTCGGTAAATTGTTGTTAAAAAAAAAAAATCAAAAAAATCACTAAGATGGTGCTGTAT
 
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rJMSF050E19+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMSF051F05+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMFF027K08+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMFF003O16+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMFF042E09+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMFF024B16+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMFF003K05+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMFF030P05+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMFF006J01+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
rJMFF022A20+          CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
                      ____________________________________________________________
consensus             CATTTGGTTTGCGTGTGATTTTCTTAAATATTAAGTAAGAAATGTACAATAGGGAAGGGA
 
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rJMSF050E19+          AAGGGAAGGGAAGGGAAAT                                         
rJMSF051F05+          AAGGGAAGGGAAGGGAAATA                                        
rJMFF027K08+          AAGGGAAGGGAAGGGAAATACATGGTGTCACTTTCCATCAATGTTGTCAATTTTTCACCC
rJMFF003O16+          AAGGGAAGGGAAGGGAAATACATGGTGTCACTTTCCATCAATGTTGTCAATTTTTCACCC
rJMFF042E09+          AAGGGAAGGGAAGGGAAATACATGGTGTCACTTTCCATCAATGTTGTCAATTTTTCACCC
rJMFF024B16+          AAGGGAAGGGAAGGGAAATACA                                      
rJMFF003K05+          AAGGGAAGGGAAGGGAAATAC                                       
rJMFF030P05+          AAGGGAAGGGAAGGGAAATAC                                       
rJMFF006J01+          AAGGGAAGGGAAGGGAAATAC                                       
rJMFF022A20+          AAGGGAAGGGAAGGGAAATACATGGTGTCACTTTCCATCAATGTTGTCAATTTTTCACCC
                      ____________________________________________________________
consensus             AAGGGAAGGGAAGGGAAATACATGGTGTCACTTTCCATCAATGTTGTCAATTTTTCACCC
 
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rJMFF027K08+          TAATATGTCAGAA                                               
rJMFF003O16+          TAATATGTCAGAATGAATAATTACAATATC                              
rJMFF042E09+          TAATATGTCAGAATGAATAATTACAATATC                              
rJMFF022A20+          TAATATGTCAGAATGAATAATTACAATATCTTAATTTGTACATCTATAAATATACCAGAC
                      ____________________________________________________________
consensus             TAATATGTCAGAATGAATAATTACAATATCTTAATTTGTACATCTATAAATATACCAGAC