Contig 006853:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021N04Sequence502014188ref|XP_009617570.1|3e-22PREDICTED: D-glycerate 3-kinase, chloroplastic [Nicotiana tomentosiformis]691006853 (3)ref|XP_011072277.1|2e-102PREDICTED: D-glycerate 3-kinase, chloroplastic isoform X2 [Sesamum indicum]
JMFN011I14Sequence575006853 (3)ref|XP_004235693.1|5e-73PREDICTED: D-glycerate 3-kinase, chloroplastic [Solanum lycopersicum]
JMFN029F07Sequence618006853 (3)gb|KJB56685.1|1e-70hypothetical protein B456_009G132100 [Gossypium raimondii]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+                               GAAGTAAAAATCTTATTCTATATTTCCATATTTCCTTGAC
rJMFF021N04-                                       ATCTTATTCTATATTTCCATATTTCCTTGAC
                      ____________________________________________________________
consensus                                 GAAGTAAAAATCTTATTCTATATTTCCATATTTCCTTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           AATGGTTAACATATGTAGTCGAATTCGACCAAAAGAACATGAGTAACAAAGAAGCATGAT
JMFN029F07+              GGTTAACATATGTAGTCGAATTCGACCAAAAGAACATGAGTAACAAAGAAGCATGAT
rJMFF021N04-          AATGGTTAACATATGTAGTCGAATTCGACCAAAAGAACATGAGTAACAAAGAAGCATGAT
                      ____________________________________________________________
consensus             AATGGTTAACATATGTAGTCGAATTCGACCAAAAGAACATGAGTAACAAAGAAGCATGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           TAAGGAAGCAAAAGTTAGCTAGAATCTTTGTACAAAAACATAGAAACCAGAGGCTGGATC
JMFN029F07+           TAAGGAAGCAAAAGTTAGCTAGAATCTTTGTACAAAAACATAGAAACCAGAGGCTGGATC
rJMFF021N04-          TAAGGAAGCAAAAGTTAGCTAGAATCTTTGTACAAAAACATAGAAACCAGAGGCTGGATC
                      ____________________________________________________________
consensus             TAAGGAAGCAAAAGTTAGCTAGAATCTTTGTACAAAAACATAGAAACCAGAGGCTGGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           GTAACAGACATTCTGCAGTTGAAAGTTTTAGCTAGCAACCAAGAATGGGGTTCCTGCCCT
JMFN029F07+           GTAACAGACATTCTGCAGTTGAAAGTTTTAGCTAGCAACCAAGAATGGGGTTCCTGCCCT
rJMFF021N04-          GTAACAGACATTCTGCAGTTGAAAGTTTTAGCTAGCAACCAAGAATGGGGTTCCTGCCCT
                      ____________________________________________________________
consensus             GTAACAGACATTCTGCAGTTGAAAGTTTTAGCTAGCAACCAAGAATGGGGTTCCTGCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           CGTCGATTTCAATGAGAAGCAAGTGGTCTGGATCTGCGCCACTTGGTCCCTCTGAGTAGA
JMFN029F07+           CGTCGATTTCAATGAGAAGCAAGTGGTCTGGATCTGCGCCACTTGGTCCCTCTGAGTAGA
rJMFF021N04-          CGTCGATTTCAATGAGAAGCAAGTGGTCTGGATCTGCGCCACTTGGTCCCTCTGAGTAGA
                      ____________________________________________________________
consensus             CGTCGATTTCAATGAGAAGCAAGTGGTCTGGATCTGCGCCACTTGGTCCCTCTGAGTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           GGGTAGGAAGGTACGCGTGGTAAGCTGGCAAGTAGCGCGACACAAAATCTTTAACCTCCT
JMFN029F07+           GGGTAGGAAGGTACGCGTGGTAAGCTGGCAAGTAGCGCGACACAAAATCTTTAACCTCCT
rJMFF021N04-          GGGTAGGAAGGTACGCGTGGTAAGCTGGCAAGTAGCGCGACACAAAATCTTTAACCTCCT
                      ____________________________________________________________
consensus             GGGTAGGAAGGTACGCGTGGTAAGCTGGCAAGTAGCGCGACACAAAATCTTTAACCTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           CATCGGACATCCCAGGTTTTCCATCAGCCCTCATAGCAATCTCGGCCTGCAATCGCCAAT
JMFN029F07+           CATCGGACATCCCAGGTTTTCCATCAGCCCTCATAGCAATCTCGGCCTGCAATCGCCAAT
rJMFF021N04-          CATCGGACATCCCAGGTTTTCCATCAGCCCTCATAGCAATCTCGGCCTGCAATCGCCAAT
                      ____________________________________________________________
consensus             CATCGGACATCCCAGGTTTTCCATCAGCCCTCATAGCAATCTCGGCCTGCAATCGCCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           TATAGACACACGTTGGGTCTTGAATCTTGATAACTATCCATGATTTTACGAACTTGTCCC
JMFN029F07+           TATAGACACACGTTGGGTCTTGAATCTTGATAACTATCCATGATTTTACGAACTTGTCCC
rJMFF021N04-          TATAGACACACGTTGGGTCTTGAATCTTGATAACTATCCATGATTTTACGAACTTGTCCC
                      ____________________________________________________________
consensus             TATAGACACACGTTGGGTCTTGAATCTTGATAACTATCCATGATTTTACGAACTTGTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           ATGCATCATAGTATGCTTCTAAATTCTTGTTAACAATCTCTAGCTGTGGGTCAACAGCTT
JMFN029F07+           ATGCATCATAGTATGCTTCTAAATTCTTGTTAACAATCTCTAGCTGTGGGTCAACAGCTT
rJMFF021N04-          ATGCATCATAGTATGCTTCTAAATTCTTGTTAACAATCTCTAGCTGTGGGTCAACAGCTT
                      ____________________________________________________________
consensus             ATGCATCATAGTATGCTTCTAAATTCTTGTTAACAATCTCTAGCTGTGGGTCAACAGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011I14+           TGACAGCTTCGGATGGAAGGGGTTTGAAACCAAGCATCCAACCCTCAAACAGAAC     
JMFN029F07+           TGACAGCTTCGGATGGAAGGGGTTTGAAACCAAGCATCCAACCCTCAAACAGAACCACC 
rJMFF021N04-          TGACAGCTTCGGATGGAAGGGGTTTGAAACCAAGCATCCAACCCTCAAACAGAACCACCG
                      ____________________________________________________________
consensus             TGACAGCTTCGGATGGAAGGGGTTTGAAACCAAGCATCCAACCCTCAAACAGAACCACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N04-          TAAGGGGCCCTTCAATCTCTGGCCATGTGGAAGGATCAGCTCTATCGCCTCTACCATTGT
                      ____________________________________________________________
consensus             TAAGGGGCCCTTCAATCTCTGGCCATGTGGAAGGATCAGCTCTATCGCCTCTACCATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF021N04-          ATGCAGATTTATCATACCGAGGGAGCTTCATCTTCGTACCTTCTTTGGTCAATTTGGTTA
                      ____________________________________________________________
consensus             ATGCAGATTTATCATACCGAGGGAGCTTCATCTTCGTACCTTCTTTGGTCAATTTGGTTA