| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012O21 | Sequence | 568 | 021656 | ref|XP_006354759.1| | 8e-26 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chlorop | 802 | 006847 (5) | ref|XP_009616596.1| | 7e-55 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chlorop |
| JMFF020N21 | Sequence | 482 | 006847 (5) | ref|XP_009613066.1| | 2e-21 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chlorop | 794 | 006847 (5) | ref|XP_009616596.1| | 9e-46 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chlorop |
| JMFF032K21 | Sequence | 536 | 006847 (5) | ref|XP_009775160.1| | 9e-34 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloropla | 757 | 006847 (5) | ref|XP_009616596.1| | 2e-57 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chlorop |
This contig is upended
. : . : . : . : . : . :
JMFF020N21- ATCGCCTCCTCAACCTCGGTTAGGTGCTT
JMFF032K21- ATCGCCTCCTCAACCTCGGTTAGGTGCTT
____________________________________________________________
consensus ATCGCCTCCTCAACCTCGGTTAGGTGCTT
. : . : . : . : . : . :
JMFF020N21- GGTGTCTATATTACTCTGCCATTTTCTCCTCAGTTTCACCGCCGCTTCTCCTCTACAAAT
JMFF032K21- GGT-TCTATATTACTCTGCCATTTTCTCCTCAGTTTCACCGCCGCTTCTCCTCTACAAAT
____________________________________________________________
consensus GGTGTCTATATTACTCTGCCATTTTCTCCTCAGTTTCACCGCCGCTTCTCCTCTACAAAT
. : . : . : . : . : . :
JMFF020N21- CCCTCCGCACCTCCACAATTCCTGCCTCACTTCTTGGATTTGGGTTTTTCACTGTTTTTC
JMFF032K21- CCCTCCGCACCTCCACAATTCCTGCCTCACTTCTTGGATTTGGGTTTTTCACTGTTTTTC
____________________________________________________________
consensus CCCTCCGCACCTCCACAATTCCTGCCTCACTTCTTGGATTTGGGTTTTTCACTGTTTTTC
. : . : . : . : . : . :
JMFF020N21- TCTCTCAATGGCTTCTTTCACCGTCCCTTCTCCCAAGACCTCCGCTTTCTTGACTGGCTC
JMFF032K21- TCTCTCAATGGCTTCTTTCACCGTCCCTTCTCCCAAGACCTCCGCTTTCTTGACTGGCTC
____________________________________________________________
consensus TCTCTCAATGGCTTCTTTCACCGTCCCTTCTCCCAAGACCTCCGCTTTCTTGACTGGCTC
. : . : . : . : . : . :
JMFF020N21- CGCTTCCTCCGCCCAGACCCGCCAGCTTCTTCCGCCCCAGAACTCCGTTTCTTTCCGATC
JMFF032K21- CGCTTCCTCCGCCCAGACCCGCCAGCTTCTTCCGCCCCAGAACTCCGTTTCTTTCCGATC
____________________________________________________________
consensus CGCTTCCTCCGCCCAGACCCGCCAGCTTCTTCCGCCCCAGAACTCCGTTTCTTTCCGATC
. : . : . : . : . : . :
JMFF020N21- TGGTTCGAGATCCGGGCCCGCATTGCAGGGTGGTTTTAAGGTGCGTGCGCAGATCAGTGA
JMFF032K21- TGGTTCGAGATCCGGGCCCGCATTGCAGGGTGGTTTTAAGGTGCGTGCGCAGATCAGTGA
____________________________________________________________
consensus TGGTTCGAGATCCGGGCCCGCATTGCAGGGTGGTTTTAAGGTGCGTGCGCAGATCAGTGA
. : . : . : . : . : . :
JMFF020N21- GGTTGCTGCCATTGAGAAATCAGCGAATTCTAAGCCAGTTGCAGAGAAAAAGACTGATGA
JMFF032K21- GTTTGCTGCCATTGAGAAATCAGCGAATTCTAAGCCAGTTGCAGAGAAAAAGACTGATGA
rJMFF032K21+ AGAAATCAGCGAATTNTAAGCCAGTTGCAGAGAAAAAGACTGATGA
rJMFF012O21+ TAAGCCAGTTGCAGAGAAAAAGACTGATGA
____________________________________________________________
consensus GTTTGCTGCCATTGAGAAATCAGCGAATTCTAAGCCAGTTGCAGAGAAAAAGACTGATGA
. : . : . : . : . : . :
JMFF020N21- AGAAATTCCCAAAACTGAGAAGACTATCCCAGATGCTTCCTCAATTTCAGCATTCATGTC
JMFF032K21- AGAAATTCCCAAAACTGAGAAGACTATCCCAGATGCTTCCTCAATTTCAGCATTCATGTC
rJMFF032K21+ AGAAATTCCCAAAACTGAGAAGACTATCCCAGATGCTTCCTCAATTTCAGCATTCATGTC
rJMFF012O21+ AGAAATTCCCAAAACTGAGAAGACTATCCCAGATGCTTCCTCAATTTCAGCATTCATGTC
rJMFF020N21+ TCAGCATTCATGTN
____________________________________________________________
consensus AGAAATTCCCAAAACTGAGAAGACTATCCCAGATGCTTCCTCAATTTCAGCATTCATGTC
. : . : . : . : . : . :
JMFF020N21- TCAAGCAGCCCAGCTTGTTGAGCTTGTGGATTC
JMFF032K21- TCAAGCAGCCCAGCTTGTTGAGCTTGTGGATTCAAGAGACATTGTTGAGTTGAAGCTAAA
rJMFF032K21+ TCAAGCAGCCCAGCTTGTTGAGCTTGTGGATTCAAGAGACATTGTTGAGTTGAAGCTAAA
rJMFF012O21+ TCAAGCAGCCCAGCTTGTTGAGCTTGTGGATTCAAGAGACATTGTTGAGTTGAAGCTAAA
rJMFF020N21+ TCAAGCAGCCCAGCTTGTTGAGCTTGTGGATTCAAGAGACATTGTTGAGTTGAAGCTAAA
____________________________________________________________
consensus TCAAGCAGCCCAGCTTGTTGAGCTTGTGGATTCAAGAGACATTGTTGAGTTGAAGCTAAA
. : . : . : . : . : . :
JMFF032K21- GCAGAATGGCTGTGAAATCGTTATAAGG
rJMFF032K21+ GCAGAATGGCTGTGAAATCGTTATAAGGAAGAAGGAAGCGTTGCAGCAAAACGTTGCACC
rJMFF012O21+ GCAGAATGGCTGTGAAATCGTTATAAGGAAGAAGGAAGCGTTGCAGCAAAACGTTGCACC
rJMFF020N21+ GCAGAATGGCTGTGAAATCGTTATAAGGAAGAAGGAAGCGTTGCAGCAAAACGTTGCACC
____________________________________________________________
consensus GCAGAATGGCTGTGAAATCGTTATAAGGAAGAAGGAAGCGTTGCAGCAAAACGTTGCACC
. : . : . : . : . : . :
rJMFF032K21+ TGCTCCCGTTGTGATGCAACAGCCTGCATTCCCGCAGGCCTATGCTCAGCCCCAGCTGCC
rJMFF012O21+ TGCTCCCGTTGTGATGCAACAGCCTGCATTCCCGCAGGCCTATGCTCAGCCCCAGCTGCC
rJMFF020N21+ TGCTCCCGTTGTGATGCAACAGCCTGCATTCCCGCAGGCCTATGCTCAGCCCCAGCTGCC
____________________________________________________________
consensus TGCTCCCGTTGTGATGCAACAGCCTGCATTCCCGCAGGCCTATGCTCAGCCCCAGCTGCC
. : . : . : . : . : . :
rJMFF032K21+ TCCTCCTGCTGCTCCCGCTCCAGCTGCTGCTGCTGCTAAAGTGGTGCCTGCCCTTCCGGC
rJMFF012O21+ TCCTCCTGCTGCTCCCGCTCCAGCTGCTGCTGCTGCTAAAGTGGTGCCTGCCCTTCCGGC
rJMFF020N21+ TCCTCCTGCTGCTCCCGCTCCAGCTGCTGCTGCTGCTAAAGTGGTGCCTGCCCTTCCGGC
____________________________________________________________
consensus TCCTCCTGCTGCTCCCGCTCCAGCTGCTGCTGCTGCTAAAGTGGTGCCTGCCCTTCCGGC
. : . : . : . : . : . :
rJMFF032K21+ CCCTTCGAAGCCAGCGTCATCTCATCCTCCATTTAAGTGTCCCATGGCGGGAACATTTTA
rJMFF012O21+ CCCTTCGAAGCCAGCGTCATCTCATCCTCCATTTAAGTGTCCCATGGCGGGAACATTTTA
rJMFF020N21+ CCCTTCGAAGCCAGCGTCATCTCATCCTCCATTTAAGTGTCCCATGGCGGGAACATTTTA
____________________________________________________________
consensus CCCTTCGAAGCCAGCGTCATCTCATCCTCCATTTAAGTGTCCCATGGCGGGAACATTTTA
. : . : . : . : . : . :
rJMFF032K21+ CCGCTCCCCTGCCCCAGGGGCACCAGCTTTTGTGAAGGTAGGAGACAAAGTCCAAAAAGG
rJMFF012O21+ CCGCTCCCCTGCCCCAGGGGCACCAGCTTTTGTGAAGGTAGGAGACAAAGTCCAAAAAGG
rJMFF020N21+ CCGCTCCCCTGCCCCAGGGGCACCAGCTTTTGTGAAGGTAGGAGACAAAGTCCAAAAAGG
____________________________________________________________
consensus CCGCTCCCCTGCCCCAGGGGCACCAGCTTTTGTGAAGGTAGGAGACAAAGTCCAAAAAGG
. : . : . : . : . : . :
rJMFF032K21+ GCAAGTAATTTGCATCATTGAGGCAATGAAACTGATGAATGAAATTGAGGCTGATCAATC
rJMFF012O21+ GCAAGTAATTTGCATCATTGAGGCAATGAAACTGATGAATGAAATTGAGGCTGATCAATC
rJMFF020N21+ GCAAGTAATTTGCATCATTGAGGCAATGAAACTGATGAATGAAATTGAGGCTGATCAATC
____________________________________________________________
consensus GCAAGTAATTTGCATCATTGAGGCAATGAAACTGATGAATGAAATTGAGGCTGATCAATC
. : . : . : . : . : . :
rJMFF032K21+ TGGGACTATAGTCGAGATAGTAGCTGAAGATGGCAAGCCTGTCAGTGTGGACACACCCTT
rJMFF012O21+ TGGGACTATAGTCGAGATAGTAGCTGAAGATGGCAAGCCTGTCAGTGTGGACACACCCTT
rJMFF020N21+ TGGGACTATAGTCGAGATAGTAGCTGAAGATGGCAAGCCTGTCAGTGTGGACACACCCTT
____________________________________________________________
consensus TGGGACTATAGTCGAGATAGTAGCTGAAGATGGCAAGCCTGTCAGTGTGGACACACCCTT
. : . : . : . : . : . :
rJMFF032K21+ GTTTGTCATTGCGCCCTGAAGAACAGAGTGAATGCTTCTGATAGGATCATAGGTGGGAAG
rJMFF012O21+ GTTTGTCATTGCGCCCTGAAGAACAGAGTGAATGCTTCTGATAGGATCATAGGTGGGAAG
rJMFF020N21+ GTTTGTCATTGCGCCCTGAAGAACAGAGTGAATGCTTCTGATAGGATCATAGGTGGGAAG
____________________________________________________________
consensus GTTTGTCATTGCGCCCTGAAGAACAGAGTGAATGCTTCTGATAGGATCATAGGTGGGAAG
. : . : . : . : . : . :
rJMFF032K21+ CGCACCACGAGTTGTTCCAAAAGTAGTGCAGCTGTACTATCATCGTATTTATAAATTGTA
rJMFF012O21+ CGCACCACGAGTTGTTCCAAAAGTAGTGCAGCTGTACTATCATCGTATTTATAAATTGTA
rJMFF020N21+ CGCACCACGAGTTGTTCCAAAAGTAGTGCAGCTGTACTATCATCGTATTTATAAATTGTA
____________________________________________________________
consensus CGCACCACGAGTTGTTCCAAAAGTAGTGCAGCTGTACTATCATCGTATTTATAAATTGTA
. : . : . : . : . : . :
rJMFF032K21+ TTTGATTATTTTGGTATTACAAA-TTTGGAACAGATCAAGTGATATAAAGAT
rJMFF012O21+ TTTGATTATTTTGGTATTACAAATTTTGGAACAGATCAAGTGATATAAAGATTGTGGATT
rJMFF020N21+ TTTGATTATTTTGGTATTACAAATTTTGGAACAGATCAAGTGATATAAAGATTGTGGATT
____________________________________________________________
consensus TTTGATTATTTTGGTATTACAAATTTTGGAACAGATCAAGTGATATAAAGATTGTGGATT
. : . : . : . : . : . :
rJMFF012O21+ ATTCTCTTCTGTTTTTTACTTGTATGATTATCCCTCTGTTGAAGTTATAT
rJMFF020N21+ ATTCTCTTCTGTTTTTTACTTGTATGATTATCCCTCTGTTGAAGTTATATGTTTAATGAA
____________________________________________________________
consensus ATTCTCTTCTGTTTTTTACTTGTATGATTATCCCTCTGTTGAAGTTATATGTTTAATGAA
. : . : . : . : . : . :
rJMFF020N21+ CAGTGATGACAATAACATATTCATGTATGTGTTCTATTCCTTTGGCAGCTAATCACAAAA
____________________________________________________________
consensus CAGTGATGACAATAACATATTCATGTATGTGTTCTATTCCTTTGGCAGCTAATCACAAAA