Contig 006844:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF011I17-                                        TCTTTGAGCTTTGGTTTTATTAAATAAATA
                      ____________________________________________________________
consensus                                           TCTTTGAGCTTTGGTTTTATTAAATAAATA
 
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rJMFF011I17-          ATTTTTTCAAATTCAAATTTTATTTTATTGATGTCAACGCCAGATTTATACACCCATATA
                      ____________________________________________________________
consensus             ATTTTTTCAAATTCAAATTTTATTTTATTGATGTCAACGCCAGATTTATACACCCATATA
 
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rJMFF011I17-          CCTACGGCAGGAGGAAAATACATAAAATAGTTGGGCTGAGCCGCTCGCCTTTCCAGTTTT
                      ____________________________________________________________
consensus             CCTACGGCAGGAGGAAAATACATAAAATAGTTGGGCTGAGCCGCTCGCCTTTCCAGTTTT
 
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rJMFF011I17-          TGAATTCTAGGCTTCCTGTTGGCCGCCGGCAGCGGCGGCGGCATCGGGGCCACTAGCACG
rJMFF020E10+                     CTTCCTGTTGGCCGCCGGCAGCGGCGGCGGCATCGGGGCCACTAGCACG
                      ____________________________________________________________
consensus             TGAATTCTAGGCTTCCTGTTGGCCGCCGGCAGCGGCGGCGGCATCGGGGCCACTAGCACG
 
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rJMFF011I17-          GCTAACATATACGGTGATGGACACAAAAACGTAGATGATTATTCCGGTCAACGACAACGG
JMFF011I17+             TAACATATACGGTGATGGACACAAAAACGTAGATGATTATTCCGGTCAACGACAACGG
rJMFF020E10+          GNTAACATATACGGTGATGGACACAAAAACGTAGATGATTATTCCGGTCAACGACAACGG
                      ____________________________________________________________
consensus             GCTAACATATACGGTGATGGACACAAAAACGTAGATGATTATTCCGGTCAACGACAACGG
 
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rJMFF011I17-          GATCAAGAACGCAACACTCACAAGGGTGGACGCAGCCATGCAAGAAAGCACTCCCAGCCT
JMFF011I17+           GATCAAGAACGCAACACTCACAAGGGTGGACGCAGCCATGCAAGAAAGCACTCCCAGCCT
rJMFF020E10+          GATCAAGAACGCAACACTCACAAGGGTGGACGCAGCCATGCAAGAAAGCACTCCCAGCCT
                      ____________________________________________________________
consensus             GATCAAGAACGCAACACTCACAAGGGTGGACGCAGCCATGCAAGAAAGCACTCCCAGCCT
 
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rJMFF011I17-          CAACTCGACCACATACACCACAGACACCAGCAAGAACAAGCACCCCACCATCGACGACAT
JMFF011I17+           CAACTCGACCACATACACCACAGACACCAGCAAGAACAAGCACCCCACCATCGACGACAT
rJMFF020E10+          CAACTCGACCACATACACCACAGACACCAGCAAGAACAAGCACCCCACCATCGACGACAT
                      ____________________________________________________________
consensus             CAACTCGACCACATACACCACAGACACCAGCAAGAACAAGCACCCCACCATCGACGACAT
 
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rJMFF011I17-          CGCCGAGAAGAGGACTCCCGTCGTCAACCAAAACGACGACTCCGGGGAGCCATCATCCTC
JMFF011I17+           CGCCGAGAAGAGGACTCCCGTCGTCAACCAAAACGACGACTCCGGGGAGCCATCATCCTC
rJMFF020E10+          CGCCGAGAAGAGGACTCCCGTCGTCAACCAAAACGACGACTCCGGGGAGCCATCATCCTC
                      ____________________________________________________________
consensus             CGCCGAGAAGAGGACTCCCGTCGTCAACCAAAACGACGACTCCGGGGAGCCATCATCCTC
 
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rJMFF011I17-          TCCGGCGGCCTGGAGATCCAGCGACAGCTTGGTCGAGAGGGCGACGAGGGAGGATAAGAG
JMFF011I17+           TCCGGCGGCCTGGAGATCCAGCGACAGCTTGGTCGAGAGGGCGACGAGGGAGGATAAGAG
rJMFF020E10+          TCCGGCGGCCTGGAGATCCAGCGACAGCTTGGTCGAGAGGGCGACGAGGGAGGATAAGAG
                      ____________________________________________________________
consensus             TCCGGCGGCCTGGAGATCCAGCGACAGCTTGGTCGAGAGGGCGACGAGGGAGGATAAGAG
 
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rJMFF011I17-          GTAGAAGCTGAAGGAGATGATCTCGAAGACGACGAGCATCTTGGCGGTGTTGGCTCCCGG
JMFF011I17+           GTAGAAGCTGAAGGAGATGATCTCGAAGACGACGAGCATCTTGGCGGTGTTGGCTCCCGG
rJMFF020E10+          GTAGAAGCTGAAGGAGATGATCTCGAAGACGACGAGCATCTTGGCGGTGTTGGCTCCCGG
                      ____________________________________________________________
consensus             GTAGAAGCTGAAGGAGATGATCTCGAAGACGACGAGCATCTTGGCGGTGTTGGCTCCCGG
 
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rJMFF011I17-          CTGGCACTCCTCCCGGACGTTAAGGCTCTGCAACTCCTCCGGCGAGACCAGATCATAATC
JMFF011I17+           CTGGCACTCCTCCCGGACGTTAAGGCTCTGCAACTCCTCCGGCGAGACCAGATCATAATC
rJMFF020E10+          CTGGCACTCCTCCCGGACGTTAAGGCTCTGCAACTCCTCCGGCGAGACCAGATCATAATC
                      ____________________________________________________________
consensus             CTGGCACTCCTCCCGGACGTTAAGGCTCTGCAACTCCTCCGGCGAGACCAGATCATAATC
 
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rJMFF011I17-          CAGCCCCAAAAACATGGCAATGGTGAACAGTGAGTTCACATCCACCACACTGTCCAGTGC
JMFF011I17+           CAGCCCCAAAAACATGGCAATGGTGAACAGTGAGTTCACATCCACCACACTGTCCAGTGC
rJMFF020E10+          CAGCCCCAAAAACATGGCAATGGTGAACAGTGAGTTCACATCCACCACACTGTCCAGTGC
                      ____________________________________________________________
consensus             CAGCCCCAAAAACATGGCAATGGTGAACAGTGAGTTCACATCCACCACACTGTCCAGTGC
 
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rJMFF011I17-          CGTCACGTGCACGTTCTTCTTGGTAGGATGGCCTTTT                       
JMFF011I17+           CGTCACGTGCACGTTCTTCTTGGTAGGATGGCCTTTT                       
rJMFF020E10+          CGTCACGTGCACGTTCTTCTTGGTAGGATGGCCTTTTCTGCATCCATGCAAACCATTAAG
                      ____________________________________________________________
consensus             CGTCACGTGCACGTTCTTCTTGGTAGGATGGCCTTTTCTGCATCCATGCAAACCATTAAG
 
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rJMFF020E10+          GAGAAAACCGATCAATTAAACATTATTATTTGCAAATGAATTAGCCATCAGTCTATAGAT
                      ____________________________________________________________
consensus             GAGAAAACCGATCAATTAAACATTATTATTTGCAAATGAATTAGCCATCAGTCTATAGAT
 
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rJMFF020E10+          GTTATTTAGTGTTTAGAAACATATTTGATGCACGGTAGTATAATGTTACGAAAGGTGCAC
                      ____________________________________________________________
consensus             GTTATTTAGTGTTTAGAAACATATTTGATGCACGGTAGTATAATGTTACGAAAGGTGCAC