| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011O09 | Sequence | 529 | 006839 (8) | ref|XP_007026594.1| | 3e-41 | Ferretin 1 isoform 2, partial [Theobroma cacao] gb|EOY07096.1| Ferretin 1 isofor | 764 | 006839 (8) | gb|AAD50644.1| | 1e-91 | ferritin 1 [Solanum tuberosum] |
| JMFF018M22 | Sequence | 528 | 006839 (8) | ref|XP_007026594.1| | 3e-41 | Ferretin 1 isoform 2, partial [Theobroma cacao] gb|EOY07096.1| Ferretin 1 isofor | 769 | 006839 (8) | gb|AAD50644.1| | 8e-92 | ferritin 1 [Solanum tuberosum] |
| JMFF038M10 | Sequence | 526 | 006839 (8) | ref|XP_007026594.1| | 2e-40 | Ferretin 1 isoform 2, partial [Theobroma cacao] gb|EOY07096.1| Ferretin 1 isofor | 749 | 006839 (8) | ref|XP_011046818.1| | 5e-78 | PREDICTED: ferritin, chloroplastic-like [Populus euphratica] |
| JMSF048D10 | Sequence | 688 | 006839 (8) | ref|XP_007026594.1| | 5e-64 | Ferretin 1 isoform 2, partial [Theobroma cacao] gb|EOY07096.1| Ferretin 1 isofor | 730 | 006839 (8) | gb|AAD50644.1| | 4e-92 | ferritin 1 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFF011O09- ACCCAGCAATCTCTACCGCTCTACCATTTCCCTTCCTGCA
JMFF018M22- ACCCAGCAATCTCTACCGCTCTACCATTTCCCTTCCTGCA
JMFF038M10- ACCCAGCAATCTCTACCGCTCTACCATTTCCCTTCCTGCA
JMSF048D10- GCGCCACCCAGCAATCTCTACCGCTCTACCATTTCCCTTCCTGCA
____________________________________________________________
consensus GCGCCACCCAGCAATCTCTACCGCTCTACCATTTCCCTTCCTGCA
. : . : . : . : . : . :
JMFF011O09- TAGATTTCTGTTGTTCTGTTTTCTCTTTGAGTCTTGAAGATATGGCGTTTTCAGCTGTTT
JMFF018M22- TAGATTTCTGTTGTTCTGTTTTCTCTTTGAGTCTTGAAGATATGGCGTTTTCAGCTGTTT
JMFF038M10- TAGATTTCTGTTGTTCTGTTTTCTCTTTGAGTCTTGAAGATATGGCGTTTTCAGCTGTTT
JMSF048D10- TAGATTTCTGTTGTTCTGTTTTCTCTTTGAGTCTTGAAGATATGGCGTTTTCAGCTGTTT
____________________________________________________________
consensus TAGATTTCTGTTGTTCTGTTTTCTCTTTGAGTCTTGAAGATATGGCGTTTTCAGCTGTTT
. : . : . : . : . : . :
JMFF011O09- CCCTGTGCAAGGCTTCCTGCGCTTTGCTTCCGTGCTTGACCTCTGCTTCTCCGATCGCCC
JMFF018M22- CCCTGTGCAAGGCTTCCTGCGCTTTGCTTCCGTGCTTGACCTCTGCTTCTCCGATCGCCC
JMFF038M10- CCCTGTGCAAGGCTTCCTGCGCTTTGCTTCCGTGCTTGACCTCTGCTTCTCCGATCGCCC
JMSF048D10- CCCTGTGCAAGGCTTCCTGCGCTTTGCTTCCGTGCTTGACCTCTGCTTCTCCGATCGCCC
____________________________________________________________
consensus CCCTGTGCAAGGCTTCCTGCGCTTTGCTTCCGTGCTTGACCTCTGCTTCTCCGATCGCCC
. : . : . : . : . : . :
JMFF011O09- CTGCTTCCTCTGTTTCCGGCCTCGCGTTTCCGAGGAAGCGGAGCGGTGGATTCTCCATCT
JMFF018M22- CTGCTTCCTCTGTTTCCGGCCTCGCGTTTCCGAGGAAGCGGAGCGGTGGATTCTCCATCT
JMFF038M10- CTGCTTCCTCTGTTTCCGGCCTCGCGTTTCCGAGGAAGCGGAGCGGTGGATTCTCCATCT
JMSF048D10- CTGCTTCCTCTGTTTCCGGCCTCGCGTTTCCGAGGAAGCGGAGCGGTGGATTCTCCATCT
rJMFF038M10+ T
____________________________________________________________
consensus CTGCTTCCTCTGTTTCCGGCCTCGCGTTTCCGAGGAAGCGGAGCGGTGGATTCTCCATCT
. : . : . : . : . : . :
JMFF011O09- CCGCCGCGGCGGAGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
JMFF018M22- CCGCCGCGGCGGAGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
JMFF038M10- CCGCCGCGGCGGAGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
JMSF048D10- CCGCCGCGGCGGAGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
rJMSF048D10+ CCGCGGCGGAGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
rJMFF038M10+ CCGCCGCGGCGGAGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
rJMFF011O09+ AGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
rJMFF018M22+ GGAGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
____________________________________________________________
consensus CCGCCGCGGCGGAGACGGCTGATGCGCCGCTCACCGGAGTGGTGTTTCAGCCGTTTGTGG
. : . : . : . : . : . :
JMFF011O09- AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCT-CAGGTCTCGCTTGCTCGCCAG
JMFF018M22- AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCT-CAGGTCTCGCTTGCTCGCCAG
JMFF038M10- AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCT-CAGGTCTCGCTTGCTCGCCAG
JMSF048D10- AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCT-CAGGTCTCGCTTGCTCGCCAG
rJMSF048D10+ AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCT-CAGGTCTCGCTTGCTCGCCAG
rJMFF038M10+ AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCTCCAGGTCTCGCTTGCTCGCCAG
rJMFF011O09+ AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCT-CAGGTCTCGCTTGCTCGCCAG
rJMFF018M22+ AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCT-CAGGTCTCGCTTGCTCGCCAG
____________________________________________________________
consensus AGGTTAAGAAGGATGAGCTTATGGTCCCCTCCGGTGCT-CAGGTCTCGCTTGCTCGCCAG
. : . : . : . : . : . :
JMFF011O09- AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
JMFF018M22- AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
JMFF038M10- AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
JMSF048D10- AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
rJMSF048D10+ AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
rJMFF038M10+ AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
rJMFF011O09+ AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
rJMFF018M22+ AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
____________________________________________________________
consensus AGGTACATCGACGAGTGCGAGGCTGCGATCAATGAGCAGATCAACGTTGAATACAGCGCA
. : . : . : . : . : . :
JMFF011O09- TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
JMFF018M22- TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
JMFF038M10- TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
JMSF048D10- TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
rJMSF048D10+ TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
rJMFF038M10+ TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
rJMFF011O09+ TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
rJMFF018M22+ TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
____________________________________________________________
consensus TCTTATGTGTATCACTCCATGTATGCATACTTCGACAGAGATAACGTTGCGCTCAAGGGC
. : . : . : . : . : . :
JMFF011O09- ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
JMFF018M22- ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
JMFF038M10- ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
JMSF048D10- ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
rJMSF048D10+ ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
rJMFF038M10+ ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
rJMFF011O09+ ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
rJMFF018M22+ ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
____________________________________________________________
consensus ATGGCTAAATTTTTCAAGGAATCAAGTGAGGAAGAAAGGGAGCACGCTGAGAAGCTGATG
. : . : . : . : . : . :
JMFF011O09- AAATATCAGA
JMFF018M22- AAATATCAG
JMFF038M10- AAATATC
JMSF048D10- AAATATCAGAACACCCGAGGAGGAAGGGTGAAGCTGCACTCTATTCTGATGCCTCCTTCT
rJMSF048D10+ AAATATCAGAACACCCGAGGAGGAAGGGTGAAGCTGCACTCTATTCTGATGCCTCCTTCT
rJMFF038M10+ AAATATCAGAACACCCGAGGAGGAAGGGTGAAGCTGCACTCTATTCTGATGCCTCCTTCT
rJMFF011O09+ AAATATCAGAACACCCGAGGAGGAAGGGTGAAGCTGCACTCTATTCTGATGCCTCCTTCT
rJMFF018M22+ AAATATCAGAACACCCGAGGAGGAAGGGTGAAGCTGCACTCTATTCTGATGCCTCCTTCT
____________________________________________________________
consensus AAATATCAGAACACCCGAGGAGGAAGGGTGAAGCTGCACTCTATTCTGATGCCTCCTTCT
. : . : . : . : . : . :
JMSF048D10- GAGTTTGACAACAACGAAAAAGGCGATGCGTTGCATGCAATGGAGCTAGCGCTTTCCTTG
rJMSF048D10+ GAGTTTGACAACAACGAAAAAGGCGATGCGTTGCATGCAATGGAGCTAGCGCTTTCCTTG
rJMFF038M10+ GAGTTTGACAACAACGAAAAAGGCGATGCGTTGCATGCAATGGAGCTAGCGCTTTCCTTG
rJMFF011O09+ GAGTTTGACAACAACGAAAAAGGCGATGCGTTGCATGCAATGGAGCTAGCGCTTTCCTTG
rJMFF018M22+ GAGTTTGACAACAACGAAAAAGGCGATGCGTTGCATGCAATGGAGCTAGCGCTTTCCTTG
____________________________________________________________
consensus GAGTTTGACAACAACGAAAAAGGCGATGCGTTGCATGCAATGGAGCTAGCGCTTTCCTTG
. : . : . : . : . : . :
JMSF048D10- GAGAAGTTGGTGAATGAGAAGCTCCTGAACCTGCATGCTGTAGC
rJMSF048D10+ GAGAAGTTGGTGAATGAGAAGCTCCTGAACCTGCATGCTGTAGCTAATAAGAACAATGAT
rJMFF038M10+ GAGAAGTTGGTGAATGAGAAGCTCCTGAACCTGCATGCTGTAGCTAATAAGAACAATGAT
rJMFF011O09+ GAGAAGTTGGTGAATGAGAAGCTCCTGAACCTGCATGCTGTAGCTAATAAGAACAATGAT
rJMFF018M22+ GAGAAGTTGGTGAATGAGAAGCTCCTGAACCTGCATGCTGTAGCTAATAAGAACAATGAT
____________________________________________________________
consensus GAGAAGTTGGTGAATGAGAAGCTCCTGAACCTGCATGCTGTAGCTAATAAGAACAATGAT
. : . : . : . : . : . :
rJMSF048D10+ GTTGAAATGCAAGATTTTGTTGAGAGAGAGTTCCTGGAGGAGCAGGTGGAAGCCATCAAG
rJMFF038M10+ GTTGAAATGCAAGATTTTGTTGAGAGAGAGTTCCTGGAGGAGCAGGTGGAAGCCATCAAG
rJMFF011O09+ GTTGAAATGCAAGATTTTGTTGAGAGAGAGTTCCTGGAGGAGCAGGTGGAAGCCATCAAG
rJMFF018M22+ GTTGAAATGCAAGATTTTGTTGAGAGAGAGTTCCTGGAGGAGCAGGTGGAAGCCATCAAG
____________________________________________________________
consensus GTTGAAATGCAAGATTTTGTTGAGAGAGAGTTCCTGGAGGAGCAGGTGGAAGCCATCAAG
. : . : . : . : . : . :
rJMSF048D10+ AAAATAGCAGAGTATGTTACACAACTGAGAATGGTTGGAAAGGGACATGGAGTGTGGCAC
rJMFF038M10+ AAAATAGCAGAGTATGTTACACAACTGAGAATGGTTGGAAAGGGACATGGAGTGTGGCAC
rJMFF011O09+ AAAATAGCAGAGTATGTTACACAACTGAGAATGGTTGGAAAGGGACATGGAGTGTGGCAC
rJMFF018M22+ AAAATAGCAGAGTATGTTACACAACTGAGAATGGTTGGAAAGGGACATGGAGTGTGGCAC
____________________________________________________________
consensus AAAATAGCAGAGTATGTTACACAACTGAGAATGGTTGGAAAGGGACATGGAGTGTGGCAC
. : . : . : . : . : . :
rJMSF048D10+ TTTGATCAGAGGCTCCTCGATTAACATTAAGGGACTATATGAAGGACCGTAGGGCTGTTT
rJMFF038M10+ TTTGATCAGAGGCTCCTCGATTAACATTAAGGGACTATATGAAGGACCGTAGGGCTGTTT
rJMFF011O09+ TTTGATCAGAGGCTCCTCGATTAACATTAAGGGACTATATGAAGGACCGTAGGGCTGTTT
rJMFF018M22+ TTTGATCAGAGGCTCCTCGATTAACATTAAGGGACTATATGAAGGACCGTAGGGCTGTTT
____________________________________________________________
consensus TTTGATCAGAGGCTCCTCGATTAACATTAAGGGACTATATGAAGGACCGTAGGGCTGTTT
. : . : . : . : . : . :
rJMSF048D10+ CTTTCCAGTAGGAAGGCTTAGATAGTTTCATCTTATGTACTANTTTCCTTCATAG
rJMFF038M10+ CTTTCCAGTAGGAAGGCTTAGATAGTTTCATCTTATGTACTATTTTCCTTAATAGAGACA
rJMFF011O09+ CTTTCCAGTAGGAAGGCTTAGATAGTTTCATCTTATGTACTATTTTCCTTAATAGAGACA
rJMFF018M22+ CTTTCCAGTAGGAAGGCTTAGATAGTTTCATCTTATGTACTATTTTCCTTAATAGAGACA
____________________________________________________________
consensus CTTTCCAGTAGGAAGGCTTAGATAGTTTCATCTTATGTACTATTTTCCTTAATAGAGACA
. : . : . : . : . : . :
rJMFF038M10+ TGTTAAGATGTTTTGGATGTGTATTAGT
rJMFF011O09+ TGTTAAGATGTTTTGGATGTGTATTAGTTGTAATGGGGTTTGGTTATAATTAATAAA
rJMFF018M22+ TGTTAAGATGTTTTGGATGTGTATTAGTTGTAATGGGGTTTGGTTATAATTAATAAAATC
____________________________________________________________
consensus TGTTAAGATGTTTTGGATGTGTATTAGTTGTAATGGGGTTTGGTTATAATTAATAAAATC