Contig 006837:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008C23+                                                              AATCCGGA
rJMFF018H10+                                        GATTATATATGGGCTCTNGTAAAATCCGGA
                      ____________________________________________________________
consensus                                           GATTATATATGGGCTCTNGTAAAATCCGGA
 
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rJMSF008C23+          AAGTTGCTACAGCTGAAAGAACCGTGCCCGCTGTTAATGGCGTGTTTGTCACAACACAAA
rJMFF018H10+          AAGTTGCTAGAGCTGAAAGAACCGTGCCCGCTGTTAATGGCGTGTTTGTCACAACACAAA
                      ____________________________________________________________
consensus             AAGTTGCTAGAGCTGAAAGAACCGTGCCCGCTGTTAATGGCGTGTTTGTCACAACACAAA
 
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rJMSF008C23+          CGCCAAAGGTCACGACTGAAACTAAAGTCGGGGAAGCCCAAAAGAGGAAAGCCACAGCGG
rJMFF018H10+          CGCCAAAGGTCACGACTGAAACTAAAGTCGGGGAAGCCCAAAAGAGGAAAGCCACAGCGG
                      ____________________________________________________________
consensus             CGCCAAAGGTCACGACTGAAACTAAAGTCGGGGAAGCCCAAAAGAGGAAAGCCACAGCGG
 
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rJMSF008C23+          AACATGTATAAAGATTTCAGATGTGGCCTTAATCCTCGAGTCCTTGGCTTCCATGATCTT
rJMFF018H10+          AACATGTATAA-------AGATGTGGCCTTAATCCTCGAGTCCTTGGCTTCCATGATCTT
                      ____________________________________________________________
consensus             AACATGTATAAAGATTTCAGATGTGGCCTTAATCCTCGAGTCCTTGGCTTCCATGATCTT
 
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rJMSF008C23+          CGTCTGAAGCTTCTTCTGCATACTGGCAAACGGGATATTGCTCAACATCACAACGATCGT
rJMFF018H10+          CGTCTGAAGCTTCTTCTGCATACTGGCAAACGGGATATTGCTCAACATCACAACGATCGT
                      ____________________________________________________________
consensus             CGTCTGAAGCTTCTTCTGCATACTGGCAAACGGGATATTGCTCAACATCACAACGATCGT
 
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rJMSF008C23+          CGCAACAAAAGCAGCCGCGGAAGGAGCAGCACCCAAGTTCATGTACAAGATGAGCAATGC
rJMFF018H10+          CGCAACAAAAGCAGCCGCGGAAGGAGCAGCACCCAAGTTCATGTACAAGATGAGCAATGC
                      ____________________________________________________________
consensus             CGCAACAAAAGCAGCCGCGGAAGGAGCAGCACCCAAGTTCATGTACAAGATGAGCAATGC
 
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rJMSF008C23+          AAAAATGACCTGAAAGGGAAGTAACCAAATCCAATGGATGAACATGAAGAAGTCCCCAAT
rJMFF018H10+          AAAAATGACCTGAAAGGGAAGTAACCAAATCCAATGGATGAACATGAAGAAGTCCCCAAT
                      ____________________________________________________________
consensus             AAAAATGACCTGAAAGGGAAGTAACCAAATCCAATGGATGAACATGAAGAAGTCCCCAAT
 
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rJMSF008C23+          CCTCTCCACATCAACATTGAGGAAATTAATGACTTTCCCTGTGCTCACACTGCCATGCTT
rJMFF018H10+          CCTCTCCACATCAACATTGAGGAAATTAATGACTTTCCCTGTGCTCACACTGCCATGCTT
                      ____________________________________________________________
consensus             CCTCTCCACATCAACATTGAGGAAATTAATGACTTTCCCTGTGCTCACACTGCCATGCTT
 
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rJMSF008C23+          AACTGTCAAAGACTTCTTGTAGGTCAAAGCCATGAGAGCTGCTCTCACTCTAATCCCAAT
rJMFF018H10+          AACTGTCAAAGACTTCTTGTAGGTCAAAGCCATGAGAGCTGCTCTCACTCTAATCCCAAT
                      ____________________________________________________________
consensus             AACTGTCAAAGACTTCTTGTAGGTCAAAGCCATGAGAGCTGCTCTCACTCTAATCCCAAT
 
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rJMSF008C23+          GCGGTGAGCCCCAAAATACCATTGCCTTTGGGCAAGGGATTCCACCATCTTTGCAATGAA
rJMFF018H10+          GCGGTGAGCCCCAAAATACCATTGCCTTTGGGCAAGGGATTCCACCATCTTTGCAATGAA
                      ____________________________________________________________
consensus             GCGGTGAGCCCCAAAATACCATTGCCTTTGGGCAAGGGATTCCACCATCTTTGCAATGAA
 
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rJMSF008C23+          GAAGATGAATGAGAGAAGCAATCCCTTTTGCCAGTTTGAATTGTCATGCTTTTCTGACAA
rJMFF018H10+          GAAGATGAATGAGAGAAGCAATCCCTTTTGCCAGTTTGAATTGTCATGCCTTTCTGACAA
                      ____________________________________________________________
consensus             GAAGATGAATGAGAGAAGCAATCCCTTTTGCCAGTTTGAATTGTCATGCTTTTCTGACAA
 
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rJMSF008C23+          GAACTTCACAAAGCTTGTGATCAGCAAAGGGCCGATATAGGAAGCTATCGTGTTGGTTCC
rJMFF018H10+          GAACTTCACAAAGCTTGTGATTAGCAAAGGGCCGATATAGGAAGCTATCGTGTTGGTTCC
                      ____________________________________________________________
consensus             GAACTTCACAAAGCTTGTGATTAGCAAAGGGCCGATATAGGAAGCTATCGTGTTGGTTCC
 
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rJMSF008C23+          TATACAAACGAACAGAAATTTATGTTAGTACTGTTTATGCTAAACATAAAAACCCCTCCA
rJMFF018H10+          TATACAAACGAACAGAAATTTATGTTAGTACTGTTTATGCTAAACATAAAAACCCCTCCA
                      ____________________________________________________________
consensus             TATACAAACGAACAGAAATTTATGTTAGTACTGTTTATGCTAAACATAAAAACCCCTCCA
 
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rJMSF008C23+          TGTT                                                        
rJMFF018H10+          TGTTTAACGTCCCATTTACTTACACAAAATGAAAATAGAGAGAATAGGAATGCTAGGCAG
                      ____________________________________________________________
consensus             TGTTTAACGTCCCATTTACTTACACAAAATGAAAATAGAGAGAATAGGAATGCTAGGCAG