Contig 006834:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017K19Sequence606006834 (4)ref|XP_011084653.1|1e-22PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Sesamum indicum]721006834 (4)ref|XP_011084653.1|1e-08PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Sesamum indicum]
JMSF036D17Sequence687006834 (4)ref|XP_011084653.1|2e-22PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Sesamum indicum]678006834 (4)ref|XP_011084653.1|2e-22PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF017K19- CCATCAGACAGCGTAAGAAGGATGAGAGAGAGGCTG
rJMSF036D17+ ATCAGACAGCGTAAGAAGGATGAGAGAGAGGCTG
JMSF036D17- ATCAGACAGCGTAAGAAGGATGAGAGAGAGGCTG
                      ____________________________________________________________
consensus CCATCAGACAGCGTAAGAAGGATGAGAGAGAGGCTG
 
. : . : . : . : . : . :
JMFF017K19- GAAAGATGTGTACTTCTTCCCTTTTCTCTGGGATGCATCTCCGAGTCCAGTGTTGTGGTT
rJMSF036D17+ GAAAGATGTGTACTTCTTCCCTTTTCTCTGGGATGCATCTCCGAGTCCAGTGTTGTGGTT
JMSF036D17- GAAAGATGTGTACTTCTTCCCTTTTCTCTGGGATGCATCTCCGAGTCCAGTGTTGTGGTT
                      ____________________________________________________________
consensus GAAAGATGTGTACTTCTTCCCTTTTCTCTGGGATGCATCTCCGAGTCCAGTGTTGTGGTT
 
. : . : . : . : . : . :
JMFF017K19- CGTCGTCCAGACTGCCACATCAAGAGATCATCAGACCCCCAACTCTCACCCCCCTACCAT
rJMSF036D17+ CGTCGTCCAGACTGCCACATCAAGAGATCATCAGACCCCCAACTCTCACCCCCCTACCAT
JMSF036D17- CGTCGTCCAGACTGCCACATCAAGAGATCATCAGACCCCCAACTCTCACCCCCCTACCAT
rJMFF017K19+ T
                      ____________________________________________________________
consensus CGTCGTCCAGACTGCCACATCAAGAGATCATCAGACCCCCAACTCTCACCCCCCTACCAT
 
. : . : . : . : . : . :
JMFF017K19- TTAACAACTCCTACAAGGACCAAAGAAGGGAGGGAGAAAGAGGACGAAGAAGAAGATGAT
rJMSF036D17+ TTAACAACTCCTACAAGGACCAAAGAAGGGAGGGAGAAAGAGGACGAAGAAGAAGATGAT
JMSF036D17- TTAACAACTCCTACAAGGACCAAAGAAGGGAGGGAGAAAGAGGACGAAGAAGAAGATGAT
rJMFF017K19+ TTAACAACTCCTACAAGGACCAAAGAAGGGAGGGAGAAAGAGGACGAAGAAGAAGATGAT
                      ____________________________________________________________
consensus TTAACAACTCCTACAAGGACCAAAGAAGGGAGGGAGAAAGAGGACGAAGAAGAAGATGAT
 
. : . : . : . : . : . :
JMFF017K19- GATGAAGATGTGCAGTCACTGCCCAGGTTTCAGAGACTCTTTAAGAATTTCAAGAACTTC
rJMSF036D17+ GATGAAGATGTGCAGTCACTGCCCAGGTTTCAGAGACTCTTTAAGAATTTCAAGAACTTC
JMSF036D17- GATGAAGATGTGCAGTCACTGCCCAGGTTTCAGAGACTCTTTAAGAATTTCAAGAACTTC
rJMFF017K19+ GATGAAGATGTGCAGTCACTGCCCAGGTTTCAGAGACTCTTTAAGAATTTCAAGAACTTC
                      ____________________________________________________________
consensus GATGAAGATGTGCAGTCACTGCCCAGGTTTCAGAGACTCTTTAAGAATTTCAAGAACTTC
 
. : . : . : . : . : . :
JMFF017K19- TCTCAGTTACTCTTGTACAAGGAAGAGGACGACGAAATTGGAGATGAGGAAATACCGATA
rJMSF036D17+ TCTCAGTTACTCTTGTACAAGGAAGAGGACGACGAAATTGGAGATGAGGAAATACCGATA
JMSF036D17- TCTCAGTTACTCTTGTACAAGGAAGAGGACGACGAAATTGGAGATGAGGAAATACCGATA
rJMFF017K19+ TCTCAGTTACTCTTGTACAAGGAAGAGGACGACGAAATTGGAGATGAGGAAATACCGATA
                      ____________________________________________________________
consensus TCTCAGTTACTCTTGTACAAGGAAGAGGACGACGAAATTGGAGATGAGGAAATACCGATA
 
. : . : . : . : . : . :
JMFF017K19- ATGGAAGGCGGAGGCGGCATGGAAATCGGATTCCCAACCGATGTGAAGCACGTAACTCAT
rJMSF036D17+ ATGGAAGGCGGAGGCGGCATGGAAATCGGATTCCCAACCGATGTGAAGCACGTAACTCAT
JMSF036D17- ATGGAAGGCGGAGGCGGCATGGAAATCGGATTCCCAACCGATGTGAAGCACGTAACTCAT
rJMFF017K19+ ATGGAAGGCGGAGGCGGCATGGAAATCGGATTCCCAACCGATGTGAAGCACGTAACTCAT
                      ____________________________________________________________
consensus ATGGAAGGCGGAGGCGGCATGGAAATCGGATTCCCAACCGATGTGAAGCACGTAACTCAT
 
. : . : . : . : . : . :
JMFF017K19- ATCGGCTTTGACGGCGCTGCAACTTCCATACT-CTCCGTGAACTGGAGGCAGCCGACCGC
rJMSF036D17+ ATCGGCTTTGACGGCGCTGCAACTTCCATACT-CTCCGTGAACTGGAGGCAGCCGACCGC
JMSF036D17- ATCGGCTTTGACGGCGCTGCAACTTCCATACT-CTCCGTGAACTGGAGGCAGCCGACCGC
rJMFF017K19+ ATCGGCTTTGACGGCGCTGCAACTTCCATACTNCTCCGTGAACTGGAGGCAGCCGACCGC
                      ____________________________________________________________
consensus ATCGGCTTTGACGGCGCTGCAACTTCCATACT-CTCCGTGAACTGGAGGCAGCCGACCGC
 
. : . : . : . : . : . :
JMFF017K19- CGACGTCGACTTCTTCAGCACCGGAAATGATTCTCCTCATCCTCCTCCGGCCGTCGCAAT
rJMSF036D17+ CGACGTCGACTTCTTCAGCACCGGAAATGATTCTCCTCATCCTCCTCCGGCCGTCGCAAT
JMSF036D17- CGACGTCGACTTCTTCAGCACCGGAAATGATTCTCCTCATCCTCCTCCGGCCGTCGCAAT
rJMFF017K19+ CGACGTCGACTTCTTCAGCACCGGAAATGATTCTCCTCATCCTCCTCCGGCCGTCGCAAT
                      ____________________________________________________________
consensus CGACGTCGACTTCTTCAGCACCGGAAATGATTCTCCTCATCCTCCTCCGGCCGTCGCAAT
 
. : . : . : . : . : . :
JMFF017K19- GGTGGCTGCGCCTGGTGGTACGGCGGCATGCGTGTTATACTATTGAATATTGATAATGAG
rJMSF036D17+ GGTGGCTGCGCCTGGTGGTACGGCGGCATGAGGGTTATACTATTGAATATTGATAATGAG
JMSF036D17- GGTGGCTGCGCCTGGTGGTACGGCGGCATGAGGGTTATACTATTGAATATTGATAATGAG
rJMFF017K19+ GGTGGCTGCGCCTGGTGGTACGGCGGCATGCGTGTTATACTATTGAATATTGATAATGAG
                      ____________________________________________________________
consensus GGTGGCTGCGCCTGGTGGTACGGCGGCATGCGTGTTATACTATTGAATATTGATAATGAG
 
. : . : . : . : . : . :
JMFF017K19- AATACACTACCCTCGAGCAACGCTCCCGGAT
rJMSF036D17+ AATACACTACCCTCGAGCAACGCTCCCGGATTCCTTTGCCGGAAGAAGTTAATCGATCGA
JMSF036D17- AATACACTACCCTCGAGCAACGCTCCCGGATTCCTTTGCCGGAAGAAGTTAATCGATCGA
rJMFF017K19+ AATACACTACCCTCGAGCAACGCTCCCGGATTCCTTTGCCGGAAGAAGTTAATCGATCGA
                      ____________________________________________________________
consensus AATACACTACCCTCGAGCAACGCTCCCGGATTCCTTTGCCGGAAGAAGTTAATCGATCGA
 
. : . : . : . : . : . :
rJMSF036D17+ TCTCCTCAACTGTCTATTATACCAATGCCAAATCTGTAAACTGT
JMSF036D17- TCTCCTCAACTGTCTATTATACCAATGCCNAATCTGTAAACTGTTATTAACCT
rJMFF017K19+ TCTCCTCAACTGTCTATTATACCAATGCCAAATCTGTAAACTGTTATTAACCTCCCCATG
                      ____________________________________________________________
consensus TCTCCTCAACTGTCTATTATACCAATGCCAAATCTGTAAACTGTTATTAACCTCCCCATG
 
. : . : . : . : . : . :
rJMFF017K19+ GCTTATTGATTGATAGATGGATGAGCTCATCACTTTCCCCATTTGGTTTCGTGTTTTTAG
                      ____________________________________________________________
consensus GCTTATTGATTGATAGATGGATGAGCTCATCACTTTCCCCATTTGGTTTCGTGTTTTTAG
 
. : . : . : . : . : . :
rJMFF017K19+ TGTAATAACTAAAATTTCCCCCCAAAAAAATGACTGTATTTTCCCTTAAGACAAGTTTCC
                      ____________________________________________________________
consensus TGTAATAACTAAAATTTCCCCCCAAAAAAATGACTGTATTTTCCCTTAAGACAAGTTTCC
 
. : . : . : . : . : . :
rJMFF017K19+ TCCATATATATAGAGAAGAAAGTCTAAGGGCTGGTGGACACTGCACAATACAATCTCATA
                      ____________________________________________________________
consensus TCCATATATATAGAGAAGAAAGTCTAAGGGCTGGTGGACACTGCACAATACAATCTCATA