| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017D14 | Sequence | 636 | 006831 (12) | gb|AID16042.1| | 3e-92 | putative universal stress protein [Catharanthus roseus] | 696 | 006831 (12) | ref|XP_009758839.1| | 1e-65 | PREDICTED: universal stress protein A-like protein [Nicotiana sylvestris] |
| JMFN003L22 | Sequence | 645 | 006831 (12) | gb|AID16042.1| | 3e-92 | putative universal stress protein [Catharanthus roseus] | |||||
| JMFN009F18 | Sequence | 573 | 006831 (12) | gb|AID16042.1| | 1e-89 | putative universal stress protein [Catharanthus roseus] | |||||
| JMFN033I10 | Sequence | 572 | 006831 (12) | gb|AID16042.1| | 1e-92 | putative universal stress protein [Catharanthus roseus] | |||||
| JMFN033K04 | Sequence | 607 | 006831 (12) | gb|AID16042.1| | 3e-92 | putative universal stress protein [Catharanthus roseus] | |||||
| JMFN040L09 | Sequence | 561 | 006831 (12) | ref|XP_009758839.1| | 2e-80 | PREDICTED: universal stress protein A-like protein [Nicotiana sylvestris] | |||||
| JMFN044G17 | Sequence | 631 | 006831 (12) | gb|AID16042.1| | 3e-92 | putative universal stress protein [Catharanthus roseus] | |||||
| JMSF039F14 | Sequence | 651 | 006831 (12) | gb|AID16042.1| | 4e-92 | putative universal stress protein [Catharanthus roseus] | 612 | 006831 (12) | gb|AID16042.1| | 2e-92 | putative universal stress protein [Catharanthus roseus] |
| JMSF040L12 | Sequence | 655 | 006831 (12) | gb|AID16042.1| | 1e-91 | putative universal stress protein [Catharanthus roseus] | 621 | 006831 (12) | gb|AID16042.1| | 9e-92 | putative universal stress protein [Catharanthus roseus] |
This contig is upended
. : . : . : . : . : . :
JMFN044G17+ AATATGAAGTTTGCATTAATCTTAAAAGAA
JMFN033K04+ AAGAA
JMFN003L22+ AAACAGTGCTTTAATATGAAGTTTGCATTAATCTTAAAAGAA
JMSF039F14+ AATATGAAGTTTGCATTAATCTTAAAAGAA
JMSF040L12+ AATATGAAGTTTGCATTAATCTTAAAAGAA
JMFN040L09+ AATATGAAGTTTGCATTAATCTTAAAAGAA
rJMFF017D14- AATATGAAGTTTGCATTAATCTTAAAAGAA
____________________________________________________________
consensus AAACAGTGCTTTAATATGAAGTTTGCATTAATCTTAAAAGAA
. : . : . : . : . : . :
JMFN044G17+ AATAACAAGCTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
JMFN033K04+ AATAACAAGCTAGGGATGGAACATAG-TGTGAATCAGCTCATAATTGAACATTATCAGTG
JMFN009F18+ GCTAGGGATGGAACATAGTTGTGAATCAGCTCAGAGTTGAACATTATCAGTG
JMFN003L22+ AATAACAAGCTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
JMSF039F14+ AATAACAAGCTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
rJMSF040L12- ACAAGCTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
JMSF040L12+ AATAACAAGCTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
JMFF017D14+ GAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
JMFN033I10+ TCAGCTCATAATTGAACATTATCAGTG
rJMSF039F14- CTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
JMFN040L09+ AATAACAAGCTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
rJMFF017D14- AATAACAAGCTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
____________________________________________________________
consensus AATAACAAGCTAGGGATGGAACATAGTTGTGAATCAGCTCATAATTGAACATTATCAGTG
. : . : . : . : . : . :
JMFN044G17+ CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
JMFN033K04+ CCTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
JMFN009F18+ CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
JMFN003L22+ CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
JMSF039F14+ CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
rJMSF040L12- CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
JMSF040L12+ CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
JMFF017D14+ CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
JMFN033I10+ CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
rJMSF039F14- CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
JMFN040L09+ CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
rJMFF017D14- CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
____________________________________________________________
consensus CTTGTGATGAAAATCTTCATCTTTAACAATGGTCACAGGGCAGTTCCCATGTGCCAGGAC
. : . : . : . : . : . :
JMFN044G17+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
JMFN033K04+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
JMFN009F18+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
JMFN003L22+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
JMSF039F14+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
rJMSF040L12- ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
JMSF040L12+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
JMFF017D14+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
JMFN033I10+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
rJMSF039F14- ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
JMFN040L09+ ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
rJMFF017D14- ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
____________________________________________________________
consensus ATAGTTGGTAACACTCCCCAGGATTATCCTCTGGATGGTGCCAAGGCCTCTGCTACCCAT
. : . : . : . : . : . :
JMFN044G17+ AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
JMFN033K04+ AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
JMFN009F18+ AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTAC
JMFN003L22+ AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
JMSF039F14+ AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
rJMSF040L12- AACCAGAGAATCCAAATTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
JMSF040L12+ AACCAGAGAATCCAAATTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
JMFF017D14+ AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
JMFN033I10+ AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
rJMSF039F14- AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
JMFN040L09+ AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
rJMFF017D14- AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
____________________________________________________________
consensus AACCAGAGAATCCAACTTCAAATCTTCAATCGCATCACACAGCTTCTCCCTTGCATCTCC
. : . : . : . : . : . :
JMFN044G17+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
JMFN033K04+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
JMFN009F18+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
JMFN003L22+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
JMSF039F14+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
rJMSF040L12- CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
JMSF040L12+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
JMFF017D14+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
JMFN033I10+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
rJMSF039F14- CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
JMFN040L09+ CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
rJMFF017D14- CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
____________________________________________________________
consensus CCAGTACAATTTTATGATAACATGTATCTCTTTCTGCCTGGCGGCTGTGTCGAGCAAATC
. : . : . : . : . : . :
JMFN044G17+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
JMFN033K04+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
JMFN009F18+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
JMFN003L22+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
JMSF039F14+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
rJMSF040L12- A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
JMSF040L12+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
JMFF017D14+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
JMFN033I10+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
rJMSF039F14- A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
JMFN040L09+ A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
rJMFF017D14- ACGGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
____________________________________________________________
consensus A-AGAACTTCGATATCAGCCTGAACGCCGTAATTCTTCATCACCTCCGGCTCACGGAACT
. : . : . : . : . : . :
JMFN044G17+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
JMFN033K04+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
JMFN009F18+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
JMFN003L22+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
JMSF039F14+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
rJMSF040L12- CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
JMSF040L12+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
JMFF017D14+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
JMFN033I10+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
rJMSF039F14- CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
JMFN040L09+ CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
rJMFF017D14- CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
____________________________________________________________
consensus CAGACAGCGGGATCAGAGGAGATCCGGACTTAGACCAGAGATTATTGCGAGATTCATCGG
. : . : . : . : . : . :
JMFN044G17+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
JMFN033K04+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
JMFN009F18+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
JMFN003L22+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
JMSF039F14+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
rJMSF040L12- AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
JMSF040L12+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
JMFF017D14+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
JMFN033I10+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
rJMSF039F14- AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
JMFN040L09+ AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
rJMFF017D14- AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
____________________________________________________________
consensus AAGCGTGGGATTTGACGTGGACGATGAAGAAAGTGTCGCCTTTGTCGGCCAAGTTGTCGA
. : . : . : . : . : . :
JMFN044G17+ TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
JMFN033K04+ TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
JMFN009F18+ TCGCCAATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
JMFN003L22+ TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
JMSF039F14+ TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
rJMSF040L12- TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
JMSF040L12+ TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
JMFF017D14+ TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
JMFN033I10+ TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
rJMSF039F14- TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
JMFN040L09+ TCGCCCA-TTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCA
rJMFF017D14- TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTNGTCCATCGCCACTCCTATCTTCC
____________________________________________________________
consensus TCGCCCATTTTAACGCCAGTTTGCTGCTCTTCGAGTAGTCCATCGCCACTCCTATCTTCC
. : . : . : . : . : . :
JMFN044G17+ TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
JMFN033K04+ TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
JMFN009F18+ TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAG
JMFN003L22+ TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
JMSF039F14+ TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
rJMSF040L12- TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
JMSF040L12+ TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
JMFF017D14+ TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
JMFN033I10+ TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
rJMSF039F14- TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
rJMFF017D14- TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
____________________________________________________________
consensus TGTCTTTCGCCATTTTCTTTACTCTTTGGTGGTTTTAGTGAGAGAAAGCGATAAAGTTAA
. : . : . : . : . : . :
JMFN044G17+ AG
JMFN033K04+ AGAA
JMFN003L22+ AGAA
JMSF039F14+ AGAACAGAGACAAAAACGTAC
rJMSF040L12- AGAACAGAGACAAAAACGTACTA
JMSF040L12+ AGAACAGAGACAAAAACGTACTA
JMFF017D14+ AGAACAGAGACAAAAACGTACTAGTGTTCTGGTTTTGGTTCTGGGTGTGTACTTT
JMFN033I10+ AGAAC
rJMSF039F14- AGAACAGAGACAAAAACGTAC
rJMFF017D14- AGAACAGAGACAAAAACGTACTAGTGTTCTGGTTTTGGTTCTGGGTGTGTACTTTCGGTT
____________________________________________________________
consensus AGAACAGAGACAAAAACGTACTAGTGTTCTGGTTTTGGTTCTGGGTGTGTACTTTCGGTT