Contig 006830:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF027I09-                                                  GGTCTTGCGCTGTCGCCGGCT
                      ____________________________________________________________
consensus                                                    GGTCTTGCGCTGTCGCCGGCT
 
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JMSF027I09-           CTGTCTCCACTGGGAACTGGCCCTGTGACGCCGGCGATTCTCCGTCTCATCGCATCCTCA
                      ____________________________________________________________
consensus             CTGTCTCCACTGGGAACTGGCCCTGTGACGCCGGCGATTCTCCGTCTCATCGCATCCTCA
 
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JMSF027I09-           GCTAGTCGGATCCTCCGTACTCCTCCGTCTGCTCAGCGGCTCGTCGCCTCCAACCCTCTG
                      ____________________________________________________________
consensus             GCTAGTCGGATCCTCCGTACTCCTCCGTCTGCTCAGCGGCTCGTCGCCTCCAACCCTCTG
 
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JMSF027I09-           CTCGGTCCGCTCCAGCCTCCAGTACTCCGCGATTGAGCCGTGAGCGAGTCCTGAGTCCGC
                      ____________________________________________________________
consensus             CTCGGTCCGCTCCAGCCTCCAGTACTCCGCGATTGAGCCGTGAGCGAGTCCTGAGTCCGC
 
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JMSF027I09-           GTCTCCACCGGCCCCTCTAGCGACGCCCGGTGACCCCACCGCTCCAATCCTCCGTCATTC
                      ____________________________________________________________
consensus             GTCTCCACCGGCCCCTCTAGCGACGCCCGGTGACCCCACCGCTCCAATCCTCCGTCATTC
 
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JMSF027I09-           CACTCTCCTCGGCTCCTGCTGACTGCCTCACTGCCCAGAGTTCAGCAAAGACATAAGATT
JMFF017C22-                                                       GCAAAGACATAAGATT
                      ____________________________________________________________
consensus             CACTCTCCTCGGCTCCTGCTGACTGCCTCACTGCCCAGAGTTCAGCAAAGACATAAGATT
 
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JMSF027I09-           AAGGAGAATGGGCTATGCACAGCTGGTTATTGGCCCTGCAGGCAGTGGAAAGTCAACTTA
JMFF017C22-           AAGGAGAATGGGCTACGCACAGCTGGTTACTGGCCCTGCAGGCAGTGGAAAGTCAACTTA
                      ____________________________________________________________
consensus             AAGGAGAATGGGCTATGCACAGCTGGTTATTGGCCCTGCAGGCAGTGGAAAGTCAACTTA
 
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JMSF027I09-           CTGCTCAAATTTGCATCGACATTGTGAAGCCACACGACGAACAATCCATATAGTGAACTT
JMFF017C22-           CTGCTCAAATTTGCATCGACATTGTGAAGCCACACGACGAACAATCCATATAGTGAACTT
                      ____________________________________________________________
consensus             CTGCTCAAATTTGCATCGACATTGTGAAGCCACACGACGAACAATCCATATAGTGAACTT
 
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JMSF027I09-           AGATCCTGCAGCAGAGAATTTTGACTATCCAGTGGCTATGGACATCAGGGAACTGATTTC
JMFF017C22-           AGATCCTGCAGCAGAGAATTTTGACTATCCAGTGGCTATGGACATCAGGGAACTGATTTC
                      ____________________________________________________________
consensus             AGATCCTGCAGCAGAGAATTTTGACTATCCAGTGGCTATGGACATCAGGGAACTGATTTC
 
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JMSF027I09-           GCTGGATGATGTTATGGAGGAACTACATCTAGGCCCTAATGGTGGCCTTATTTATTGCAT
JMFF017C22-           ACTGGATGATGTTATGGAGGAACTACATCTAGGCCCTAATGGTGGCCTCATTTATTGCAT
                      ____________________________________________________________
consensus             GCTGGATGATGTTATGGAGGAACTACATCTAGGCCCTAATGGTGGCCTTATTTATTGCAT
 
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JMSF027I09-           GGAACACCTTGAAGAAAATTTGGATGACTGGCTAACAGAGGAGTTGGATAATTATATGGA
JMFF017C22-           GGAACACCTTGAAGAAAATTTGGATGACTGGCTAACAGAGGAATTGGATAATTATATGGA
rJMSF027I09+                               GGATGACTGGCTAACAGAGGAGTTGGATAATTATATGGA
rJMFF017C22+                               GGATGACTGGCTAACAGAGGAATTGGATAATTATATGGA
                      ____________________________________________________________
consensus             GGAACACCTTGAAGAAAATTTGGATGACTGGCTAACAGAGGAGTTGGATAATTATATGGA
 
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JMSF027I09-           TGATGACTACCTAGTTTTTGACTGCCCAGGTC                            
JMFF017C22-           TGATGACTACATAGTTTTTGACTGTCCAGGTCAAATTGAACTCTTCTCACATGTTCCTGT
rJMSF027I09+          TGATGACTACCTAGTTTTTGACTGCCCAGGTCAAATTGAACTCTTCTCACATGTTCCTGT
rJMFF017C22+          TGATGACTACATAGTTTTTGACTGTCCAGGTCAAATTGAACTCTTCTCACATGTTCCTGT
                      ____________________________________________________________
consensus             TGATGACTACCTAGTTTTTGACTGTCCAGGTCAAATTGAACTCTTCTCACATGTTCCTGT
 
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JMFF017C22-           GCTAAAGAATTTTGTGGAACATTTAAAGCGAAAGAATTTCAATGTCTGTGTAGTTTACTT
rJMSF027I09+          GCTGAAGAATTTTGTGGAACACTTAAAGCGAAAGAATTTCAATATCTGCGTAGTTTACTT
rJMFF017C22+          GCTAAAGAATTTTGTGGAACATTTAAAGCGAAAGAATTTCAATGTCTGTGTAGTTTACTT
                      ____________________________________________________________
consensus             GCTAAAGAATTTTGTGGAACATTTAAAGCGAAAGAATTTCAATGTCTGTGTAGTTTACTT
 
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JMFF017C22-           ACTTGATTCTCAGTTTATCACGGATGTGGCCAAATTCATCAGTGGTTGTATGGCTTCCCT
rJMSF027I09+          ACTTGATTCTCAGTTTATCACGGATGTGACCAAATTCATTAGTGGTTGTATGGCTTCCCT
rJMFF017C22+          ACTTGATTCTCAGTTTATCACGGATGTGGCCAAATTCATCAGTGGTTGTATGGCTTCCCT
                      ____________________________________________________________
consensus             ACTTGATTCTCAGTTTATCACGGATGTGGCCAAATTCATCAGTGGTTGTATGGCTTCCCT
 
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JMFF017C22-           CTCTGCAATGGTTCAACTTGAATTGCCACATGTCAACATTCTCTCAAA            
rJMSF027I09+          CTCTGCAATGGTTCAACTTGAATTGCCTCATGTCAACATTCTCTCAAAAATGGACCTTGT
rJMFF017C22+          CTCTGCAATGGTTCAACTTGAATTGCCACATGTCAACATTCTCTCAAAAATGGACCTTGT
                      ____________________________________________________________
consensus             CTCTGCAATGGTTCAACTTGAATTGCCACATGTCAACATTCTCTCAAAAATGGACCTTGT
 
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rJMSF027I09+          GACAAATAAAAAGGATATTGACAATTACTTGAATCCAGAGCCTCACTTGCTATTGGCAGA
rJMFF017C22+          GACAAATAAAAAGGATATTGACAATTACTTGAATTCAGAGGCTCAGTTGCTATTGGCGGA
                      ____________________________________________________________
consensus             GACAAATAAAAAGGATATTGACAATTACTTGAATTCAGAGGCTCAGTTGCTATTGGCGGA
 
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rJMSF027I09+          TTTGAATCAGCGCATGGCTCCACAATTTCAAAAGCTTAACAAATCTTTAATTGAGTTGGT
rJMFF017C22+          TCTGAATCAACGCATGGCTCCACAGTTTCAAAAGCTTAACAAATCTTTAATTGAATTGGT
                      ____________________________________________________________
consensus             TTTGAATCAGCGCATGGCTCCACAGTTTCAAAAGCTTAACAAATCTTTAATTGAGTTGGT
 
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rJMSF027I09+          GGATCAGTTTAGTATGGTCAGCTTTATGCCGCTTGATTTGAGGAAAGAGAGCAGTATACA
rJMFF017C22+          GGATCAGTATAGTATGGTCAGCTTTATGCCGCTTGATTTGAGGAAAGAGAGCAGTATACA
                      ____________________________________________________________
consensus             GGATCAGTTTAGTATGGTCAGCTTTATGCCGCTTGATTTGAGGAAAGAGAGCAGTATACA
 
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rJMSF027I09+          ATACATCCTGTCACAGATTGACAACTGCATTCAGTATGGTGAGGATGCAGATGTGAAGGT
rJMFF017C22+          ATACATCCTGGCACAGATTGACAACTGCATTCAGTATGGTGAGGATGCAGATGTGAAGGT
                      ____________________________________________________________
consensus             ATACATCCTGTCACAGATTGACAACTGCATTCAGTATGGTGAGGATGCAGATGTGAAGGT
 
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rJMSF027I09+          CAAAGATTTCG                                                 
rJMFF017C22+          CAAAGATTTCGCTGCTGAGGAGGATGATTAAAACCTTCCAAGTTTTTGGCGGTTTCGGAG
                      ____________________________________________________________
consensus             CAAAGATTTCGCTGCTGAGGAGGATGATTAAAACCTTCCAAGTTTTTGGCGGTTTCGGAG
 
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rJMFF017C22+          AAGCTAAAAACGCTTTTTGAAGCCATTGGGTGGCAACCCTAGTGAAAGATGAACTACCGG
                      ____________________________________________________________
consensus             AAGCTAAAAACGCTTTTTGAAGCCATTGGGTGGCAACCCTAGTGAAAGATGAACTACCGG
 
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rJMFF017C22+          TTTTGCAACTTTGTATCCAAGTGTTGTTATTTGTTGTTGAATTTGGAAGATGGAATGGCC
                      ____________________________________________________________
consensus             TTTTGCAACTTTGTATCCAAGTGTTGTTATTTGTTGTTGAATTTGGAAGATGGAATGGCC
 
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rJMFF017C22+          TGGCGGGTGGAGAATAAAACCATCCGCCAGTTAGGCGGAAGCAATAATGAAGAATCAAGG
                      ____________________________________________________________
consensus             TGGCGGGTGGAGAATAAAACCATCCGCCAGTTAGGCGGAAGCAATAATGAAGAATCAAGG
 
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rJMFF017C22+          AATGGGAAATGTATAGATAATGTATTATCTATCTGTGTTTCTAACAAAAAAACATCAAAC
                      ____________________________________________________________
consensus             AATGGGAAATGTATAGATAATGTATTATCTATCTGTGTTTCTAACAAAAAAACATCAAAC