Contig 006827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016M11Sequence567000010 (3)ref|XP_006366773.1|4e-55PREDICTED: endoplasmic oxidoreductin-1-like [Solanum tuberosum]768006827 (4)gb|KDO53447.1|4e-79hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF023H03Sequence677008022 (7)emb|CDP06120.1|8e-90unnamed protein product [Coffea canephora]724006827 (4)gb|KDO53448.1|6e-81hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF034K15Sequence661008022 (7)emb|CDP06120.1|1e-85unnamed protein product [Coffea canephora]702006827 (4)gb|KDO53447.1|2e-73hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF042B02Sequence785008022 (7)emb|CDP06120.1|4e-99unnamed protein product [Coffea canephora]830006827 (4)gb|KDO53447.1|6e-100hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]

Alignment

This contig is upended


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rJMSF042B02+                                                 TGTGGGTAAAAATTCTGGAAT
                      ____________________________________________________________
consensus                                                    TGTGGGTAAAAATTCTGGAAT
 
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rJMSF042B02+          TGATGTATGATCGTGTTTTGCAATATCCTGACCGTGTCAGAAACTTGTATTTCACTTTCC
                      ____________________________________________________________
consensus             TGATGTATGATCGTGTTTTGCAATATCCTGACCGTGTCAGAAACTTGTATTTCACTTTCC
 
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rJMSF023H03+                       AGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATGACA
rJMSF042B02+          TCTTTGTTCTTAGAGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATGACA
rJMSF034K15+                                                        GGCTGAATATGACA
rJMFF016M11+                       AGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATGACA
                      ____________________________________________________________
consensus             TCTTTGTTCTTAGAGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATGACA
 
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rJMSF023H03+          CTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
rJMSF042B02+          CTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
rJMSF034K15+          CTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
rJMFF016M11+          ATGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
                      ____________________________________________________________
consensus             CTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
 
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rJMSF023H03+          CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
rJMSF042B02+          CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
rJMSF034K15+          CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
rJMFF016M11+          CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
                      ____________________________________________________________
consensus             CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
 
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rJMSF023H03+          GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
rJMSF042B02+          GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
rJMSF034K15+          GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
rJMFF016M11+          GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
                      ____________________________________________________________
consensus             GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
 
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rJMSF023H03+          ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
rJMSF042B02+          ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
rJMSF034K15+          ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
rJMFF016M11+          ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
                      ____________________________________________________________
consensus             ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
 
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rJMSF023H03+          CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCT---CTGC
rJMSF042B02+          CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTCAGCTGC
rJMSF034K15+          CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTCAGCTGC
rJMFF016M11+          CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTCAGCTGC
                      ____________________________________________________________
consensus             CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTCAGCTGC
 
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rJMSF023H03+          AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
rJMSF042B02+          AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
rJMSF034K15+          AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
rJMFF016M11+          AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
                      ____________________________________________________________
consensus             AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
 
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rJMSF023H03+          TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
rJMSF042B02+          TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
rJMSF034K15+          TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
rJMFF016M11+          TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
                      ____________________________________________________________
consensus             TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
 
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rJMSF023H03+          CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
rJMSF042B02+          CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
rJMSF034K15+          CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
rJMFF016M11+          CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
                      ____________________________________________________________
consensus             CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
 
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rJMSF023H03+          AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
rJMSF042B02+          AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
rJMSF034K15+          AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
rJMFF016M11+          AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
                      ____________________________________________________________
consensus             AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
 
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rJMSF023H03+          AAGAGATCTCTCAGAGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
rJMSF042B02+          AAGAGATCTCTCAGAGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
rJMSF034K15+          AAGAGATCTCTCAGGGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
rJMFF016M11+          AAGAGATCTCTCAGAGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
                      ____________________________________________________________
consensus             AAGAGATCTCTCAGAGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
 
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rJMSF023H03+          TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
rJMSF042B02+          TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
rJMSF034K15+          TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
rJMFF016M11+          TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
                      ____________________________________________________________
consensus             TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
 
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rJMSF023H03+          TCTGTAACATTAAT                                              
rJMSF042B02+          TCTGTAACCATTAATTGTACGGTTTATCA                               
rJMSF034K15+          TCTGTAA-CATTAATTGTACGGTTTATCA                               
rJMFF016M11+          TCTGTAA-CATTAATTGTACGGTTTATCATGTCTCTGATTACAACTGGCAGAAAGAGAAA
                      ____________________________________________________________
consensus             TCTGTAACCATTAATTGTACGGTTTATCATGTCTCTGATTACAACTGGCAGAAAGAGAAA