Contig 006827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016M11Sequence567000010 (3)ref|XP_006366773.1|4e-55PREDICTED: endoplasmic oxidoreductin-1-like [Solanum tuberosum]768006827 (4)gb|KDO53447.1|4e-79hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF023H03Sequence677008022 (7)emb|CDP06120.1|8e-90unnamed protein product [Coffea canephora]724006827 (4)gb|KDO53448.1|6e-81hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF034K15Sequence661008022 (7)emb|CDP06120.1|1e-85unnamed protein product [Coffea canephora]702006827 (4)gb|KDO53447.1|2e-73hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF042B02Sequence785008022 (7)emb|CDP06120.1|4e-99unnamed protein product [Coffea canephora]830006827 (4)gb|KDO53447.1|6e-100hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042B02+ TGTGGGTAAAAATTCTGGAAT
                      ____________________________________________________________
consensus TGTGGGTAAAAATTCTGGAAT
 
. : . : . : . : . : . :
rJMSF042B02+ TGATGTATGATCGTGTTTTGCAATATCCTGACCGTGTCAGAAACTTGTATTTCACTTTCC
                      ____________________________________________________________
consensus TGATGTATGATCGTGTTTTGCAATATCCTGACCGTGTCAGAAACTTGTATTTCACTTTCC
 
. : . : . : . : . : . :
rJMSF023H03+ AGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATGACA
rJMSF042B02+ TCTTTGTTCTTAGAGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATGACA
rJMSF034K15+ GGCTGAATATGACA
rJMFF016M11+ AGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATGACA
                      ____________________________________________________________
consensus TCTTTGTTCTTAGAGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATGACA
 
. : . : . : . : . : . :
rJMSF023H03+ CTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
rJMSF042B02+ CTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
rJMSF034K15+ CTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
rJMFF016M11+ ATGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
                      ____________________________________________________________
consensus CTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACAACC
 
. : . : . : . : . : . :
rJMSF023H03+ CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
rJMSF042B02+ CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
rJMSF034K15+ CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
rJMFF016M11+ CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
                      ____________________________________________________________
consensus CGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCCAAA
 
. : . : . : . : . : . :
rJMSF023H03+ GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
rJMSF042B02+ GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
rJMSF034K15+ GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
rJMFF016M11+ GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
                      ____________________________________________________________
consensus GTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAATGG
 
. : . : . : . : . : . :
rJMSF023H03+ ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
rJMSF042B02+ ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
rJMSF034K15+ ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
rJMFF016M11+ ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
                      ____________________________________________________________
consensus ATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTGGAA
 
. : . : . : . : . : . :
rJMSF023H03+ CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCT---CTGC
rJMSF042B02+ CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTCAGCTGC
rJMSF034K15+ CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTCAGCTGC
rJMFF016M11+ CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTCAGCTGC
                      ____________________________________________________________
consensus CTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTCAGCTGC
 
. : . : . : . : . : . :
rJMSF023H03+ AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
rJMSF042B02+ AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
rJMSF034K15+ AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
rJMFF016M11+ AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
                      ____________________________________________________________
consensus AGTTGCAAAGAAATGAAGTCATCGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAA
 
. : . : . : . : . : . :
rJMSF023H03+ TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
rJMSF042B02+ TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
rJMSF034K15+ TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
rJMFF016M11+ TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
                      ____________________________________________________________
consensus TCAATGTTGTGCACACGACGAGCCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTT
 
. : . : . : . : . : . :
rJMSF023H03+ CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
rJMSF042B02+ CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
rJMSF034K15+ CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
rJMFF016M11+ CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
                      ____________________________________________________________
consensus CAGATCACCCAACCACAATTATTAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAA
 
. : . : . : . : . : . :
rJMSF023H03+ AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
rJMSF042B02+ AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
rJMSF034K15+ AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
rJMFF016M11+ AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
                      ____________________________________________________________
consensus AGGTGTACGTATTAGCAGAACCGTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATA
 
. : . : . : . : . : . :
rJMSF023H03+ AAGAGATCTCTCAGAGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
rJMSF042B02+ AAGAGATCTCTCAGAGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
rJMSF034K15+ AAGAGATCTCTCAGGGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
rJMFF016M11+ AAGAGATCTCTCAGAGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
                      ____________________________________________________________
consensus AAGAGATCTCTCAGAGTCATATAGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGA
 
. : . : . : . : . : . :
rJMSF023H03+ TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
rJMSF042B02+ TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
rJMSF034K15+ TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
rJMFF016M11+ TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
                      ____________________________________________________________
consensus TGATGACTGGAAACTTGTTGTCAGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATG
 
. : . : . : . : . : . :
rJMSF023H03+ TCTGTAACATTAAT
rJMSF042B02+ TCTGTAACCATTAATTGTACGGTTTATCA
rJMSF034K15+ TCTGTAA-CATTAATTGTACGGTTTATCA
rJMFF016M11+ TCTGTAA-CATTAATTGTACGGTTTATCATGTCTCTGATTACAACTGGCAGAAAGAGAAA
                      ____________________________________________________________
consensus TCTGTAACCATTAATTGTACGGTTTATCATGTCTCTGATTACAACTGGCAGAAAGAGAAA