Contig 006826:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016D18Sequence359005989 (4)ref|XP_009623871.1|2e-28PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like 628006826 (4)ref|XP_009351030.1|3e-30PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like
JMFF020E04Sequence408005989 (4)ref|XP_009623871.1|3e-28PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like 639006826 (4)ref|XP_008386160.1|2e-43PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like
JMFF023A01Sequence337005989 (4)ref|XP_009623871.1|5e-12PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like 507006826 (4)gb|KDO74061.1|3e-16hypothetical protein CISIN_1g0225552mg, partial [Citrus sinensis]
JMFF027I17Sequence530005989 (4)ref|XP_004248267.1|5e-60PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Sola664006826 (4)ref|XP_009628354.1|1e-50PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like,

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF027I17+ TCGAGGGCTTATCCCTTATAACAAGTCTGGCAAG
rJMFF020E04+ CTGGCAAG
                      ____________________________________________________________
consensus TCGAGGGCTTATCCCTTATAACAAGTCTGGCAAG
 
. : . : . : . : . : . :
rJMFF027I17+ GTTAATCCTGATTTTCCTTACTTGCTCCACCTTGGAATTCAGAGTTATGATACGAAGTTC
rJMFF020E04+ GTTAATCCTGATTTTCCTTACTTGCTCCACCTTGGAATTCAGAGTTATGATACGAAGTTC
rJMFF016D18+ TGGAATTCAGAGTTATGATACGAAGTTC
                      ____________________________________________________________
consensus GTTAATCCTGATTTTCCTTACTTGCTCCACCTTGGAATTCAGAGTTATGATACGAAGTTC
 
. : . : . : . : . : . :
rJMFF023A01+ TACAAGAAGATCTTGAACAA
rJMFF027I17+ CTCAAAATATATCCAGAACTGCAACCAACCCCACTGCAACTACAAGAAGATCTTGAACAA
rJMFF020E04+ CTCAAAATATATCCAGAACTGCAACCAACCCCACTGCAACTACAAGAAGATCTTGAACAA
rJMFF016D18+ CTCAAAATATATCCAGANCTGCAACCAACCCCNCNGCAANTACAAGAAGATCTTGAACAA
                      ____________________________________________________________
consensus CTCAAAATATATCCAGAACTGCAACCAACCCCACTGCAACTACAAGAAGATCTTGAACAA
 
. : . : . : . : . : . :
rJMFF023A01+ TTGAAGGTCCTCGAGAATGGATACAGAATGAAGGTGATTAAAGTGGATCATGAGGCTCAT
rJMFF027I17+ TTGAAGGTCCTCGAGAATGGATACAGAATGAAGGTGATTAAAGTGGATCATGAGGCTCAT
rJMFF020E04+ TTGAAGGTCCTCGAGAATGGATACAGAATGAAGGTGATTAAAGTGGATCATGAGGCTCAT
rJMFF016D18+ TTGAAGGTCCTCGAGAATGGATACAGAATGAAGGTGATTAAAGTGGATCATGAGGCTCAT
                      ____________________________________________________________
consensus TTGAAGGTCCTCGAGAATGGATACAGAATGAAGGTGATTAAAGTGGATCATGAGGCTCAT
 
. : . : . : . : . : . :
rJMFF023A01+ GGTGTTGATGCCCCAGAAGACGTACAAAAGATAGTGGAATTCATGNGTGAACGAAANTTG
rJMFF027I17+ GGTGTTGATGCCCCAGAAGACGTACAAAAGATAGTGGAATTCATGCGTGAACGAAACTTG
rJMFF020E04+ GGTGTTGATGCCCCAGAAGACGTACAAAAGATAGTGGAATTCATGCGTGAACGAAACTTG
rJMFF016D18+ GGTGTTGATGCCCCAGAAGACGTACAAANGATAGTGGAATTCATGCGTGAANGAAACTTG
                      ____________________________________________________________
consensus GGTGTTGATGCCCCAGAAGACGTACAAAAGATAGTGGAATTCATGCGTGAACGAAACTTG
 
. : . : . : . : . : . :
rJMFF023A01+ TCCTAGTAAAACTACACCAAACCGGCTATTTGTGGAGTTACACCATTACATACATACAGG
rJMFF027I17+ TCCTAGTAAAACTACACCAAACCGGCTATTTGTGGAGTTACACCATTACATACATACAGG
rJMFF020E04+ TCCTAGTAAAACTACACCAAACCGGCTATTTGTGGAGTTACACCATTACATACATACAGG
rJMFF016D18+ TCCTAGTAAANCTACACCANACCGGNTATTTGNGGAGTTACACCATTACATACATACAGG
                      ____________________________________________________________
consensus TCCTAGTAAAACTACACCAAACCGGCTATTTGTGGAGTTACACCATTACATACATACAGG
 
. : . : . : . : . : . :
rJMFF023A01+ TTAAGAGCATGCATTTCACTGTATATCAGTATATCTTCTCAAGCAAAGAGTGAACTTCCC
rJMFF027I17+ TTAAGAGCATGCATTTCACTGTATATCAGTATATCTTCTCAAGCAAAGAGTGAACTTCCC
rJMFF020E04+ TTAAGAGCATGCATTTCACTGTATATCAGTATATCTTCTCAAGCAAAGAGTGAACTTCCC
rJMFF016D18+ TTAAGAGCATGCATTTCACTGTATATCAGTATATCTTCTCAAGCAAAGAGTGAACTTCCN
                      ____________________________________________________________
consensus TTAAGAGCATGCATTTCACTGTATATCAGTATATCTTCTCAAGCAAAGAGTGAACTTCCC
 
. : . : . : . : . : . :
rJMFF023A01+ TTGTATAATCAGTACATCAATGTTTTTGAGTTCTTGTGCTGCAGTGATATCTGTCTTTTA
rJMFF027I17+ TTGTATAATCAGTACATCAATGTTTTTGAGTTCTTGTGCTGCAGTGATATCTGTCTTTTA
rJMFF020E04+ TTGTATAATCAGTACATCAATGTTTTTGAGTTCTTGTGCTGCAGTGATATCTGTCTTTTA
rJMFF016D18+ TTGTATAATCAGTACATCAATGTTTTTGAGTTCTTGTGCTGCAGTGATATCTGTCTNTTA
                      ____________________________________________________________
consensus TTGTATAATCAGTACATCAATGTTTTTGAGTTCTTGTGCTGCAGTGATATCTGTCTTTTA
 
. : . : . : . : . : . :
rJMFF023A01+ CTTCTTTTATTTTATTTTTTTTGAGATTGCCCATTTGGGTAATCCTAGAATTTGGACCAA
rJMFF027I17+ CTTCTTTTATTTTATTTTTTTTGAGATTGCCCATTTGGGTAATCCTAGAATTTGGACCAA
rJMFF020E04+ CTTCTTTTATTTTATTTTTTTTGAGATTGCCCATTTGGGTAATCCTAGAATTTGGACCAA
rJMFF016D18+ CTTCCTTTTATTTTATTTTTTTGAGATTGCCCATTTGGGTAATCCTAGAATTTGGACCAA
                      ____________________________________________________________
consensus CTTCTTTTATTTTATTTTTTTTGAGATTGCCCATTTGGGTAATCCTAGAATTTGGACCAA
 
. : . : . : . : . : . :
rJMFF023A01+ AATAAGGTTTCAGTTTGTAAAATTAAGATAATTTTATTCTGTTTTCCTTCTATGTTGCCT
rJMFF027I17+ AATAAGGTTTCAGTTTGTAAAATTAAGATAATTTTATTCTGTTTTCCTTCTATGTTGCCT
rJMFF020E04+ AATAAGGTTTCAGTTTGTAAAATTAAGATAATTTTATTCTGTTTTCCTTCTATGTTGCCT
rJMFF016D18+ AATAAGGTTTCAGTTTGTAAAATTAAGATAATTTTATTCTGTTTTCCTTCTATGTTGCCT
                      ____________________________________________________________
consensus AATAAGGTTTCAGTTTGTAAAATTAAGATAATTTTATTCTGTTTTCCTTCTATGTTGCCT
 
. : . : . : . : . : . :
rJMFF023A01+ GGAGGGAGAGGTTTTAGCATTTTGTAGTTTGAACGGCTTAGGATTTAGGAGTT
rJMFF027I17+ GGAGGGAGAGGTTTTAGCATTTTGTAGTTTGAACGGCTTAGGATTTAGGAG-TTGAAGCA
rJMFF020E04+ GGAGGGAGAGGTTTTAGCATTTTGTAGTTTGAACGGCTTAGGATTTAGGAGTTTGAAGCA
rJMFF016D18+ GGAGGGAGAGGTTTTAGCATTTTGTAGTTTGAACGGCTTAGGATTTAGGAGTTTGAAGCA
                      ____________________________________________________________
consensus GGAGGGAGAGGTTTTAGCATTTTGTAGTTTGAACGGCTTAGGATTTAGGAGTTTGAAGCA
 
. : . : . : . : . : . :
rJMFF027I17+ AAGAGAGGTGTATAAGGGGT
rJMFF020E04+ AAGAGAGGTGTATAAGGGGTGGTT
rJMFF016D18+ AAGAGAGGNGTATAAGGGGTGGTTNGGGNGAAGCTTTTTCTATGTAATAATACTATGATG
                      ____________________________________________________________
consensus AAGAGAGGTGTATAAGGGGTGGTTNGGGNGAAGCTTTTTCTATGTAATAATACTATGATG