Contig 006825:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF052C20-                                   GAACGCAACTGCCAAACTCCCAAATTCCAGATGTCA
                      ____________________________________________________________
consensus                                     GAACGCAACTGCCAAACTCCCAAATTCCAGATGTCA
 
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JMSF052C20-           TCCCTGCGATGCTGTCCTACTTCTTCCTTCTCTCATCTGAGCTCACCATCTACGTCGCAC
                      ____________________________________________________________
consensus             TCCCTGCGATGCTGTCCTACTTCTTCCTTCTCTCATCTGAGCTCACCATCTACGTCGCAC
 
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JMFF016A12-                            GAGAATTGGGATTCCTCTTATCACTGCCCTCGGCTCCGGGTAC
JMSF052C20-           AAATCCTCAATCTCCCCGAGAATTGGGATTCCTCTTATCACTGCCCTCGGCTCCGGGTAC
                      ____________________________________________________________
consensus             AAATCCTCAATCTCCCCGAGAATTGGGATTCCTCTTATCACTGCCCTCGGCTCCGGGTAC
 
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JMFF016A12-           GCGAAACCGCATTCAATCCCAGGAAACGGGCACCATTTCAATGCAATCAAATCTTCCGAC
JMSF052C20-           GCGAAACCGCATTCAATCCCAGGAAACGGGCACCATTTCAATGCAATCAAATCTTCCGAC
                      ____________________________________________________________
consensus             GCGAAACCGCATTCAATCCCAGGAAACGGGCACCATTTCAATGCAATCAAATCTTCCGAC
 
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JMFF016A12-           CAAGAAAGGGAATCCCAATTCCAGGCTCAAAACGTTGAGCTCTCTTCGAATAGCACTATC
JMSF052C20-           CAAGAAAGGGAATCCCAATTCCAGGCTCAAAACGTTGAGCTCTCTTCGAATAGCACTATC
                      ____________________________________________________________
consensus             CAAGAAAGGGAATCCCAATTCCAGGCTCAAAACGTTGAGCTCTCTTCGAATAGCACTATC
 
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JMFF016A12-           AATAGCAGCCCTTCAACCAGTCTCTTGTCTTTCCTCTGCCCTTTGCTTAAACTCTTTTCT
JMSF052C20-           AATAGCAGCCCTTCAACCAGTCTCTTGTCTTTCCTCTGCCCTTTGCTTAAACTCTTTTCT
                      ____________________________________________________________
consensus             AATAGCAGCCCTTCAACCAGTCTCTTGTCTTTCCTCTGCCCTTTGCTTAAACTCTTTTCT
 
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JMFF016A12-           GGAGGAGATCCTTCACGTGACCGAAACTATCTATTTGAGGAAGCAACATCTTCGTTATCT
JMSF052C20-           GGAGGAGATCCTTCACGTGACCGAAACTATCTATTTGAGGAAGCAACATCTTCGTTATCT
rJMSF052C20+          GGAGGAGATCCTTCACGTGACCGAAACTATCTATTTGAGGAAGCAACATCTTCGTTATCT
                      ____________________________________________________________
consensus             GGAGGAGATCCTTCACGTGACCGAAACTATCTATTTGAGGAAGCAACATCTTCGTTATCT
 
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JMFF016A12-           TCCTTGACAAGAATTGCGTGGGGCTCAAGAGCACAACCCGGAAGTTTAAATAGTGGAGAT
JMSF052C20-           TCCTTGACAAGAATTGCGTGGGGCTCAAGATCACAACCCGGAAGTTTAAATAGTGGAGAT
rJMSF052C20+          TCCTTGACAAGAATTGCGTGGGGCTCAAGATCACAACCCGGAAGTTTAAATAGTGGAGAT
rJMFF016A12+                                                      TTTAAATAGTGGAGAT
                      ____________________________________________________________
consensus             TCCTTGACAAGAATTGCGTGGGGCTCAAGATCACAACCCGGAAGTTTAAATAGTGGAGAT
 
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JMFF016A12-           AGTAATGCAGTTGATCCTCCATTGCGTTTGCAACTGTATGAATTTGAGGCATGCCCCTTT
JMSF052C20-           AGTAATGCAGTTGATCCTCCATTGCGTTTGCAACTGTATGAATTTGAGGCATGCCCCTTT
rJMSF052C20+          AGTAATGCAGTTGATCCTCCATTGCGTTTGCAACTGTATGAATTTGAGGCATGCCCCTTT
rJMFF016A12+          AGTAATGCAGTTGATCCTCCATTGCGTTTGCAACTGTATGAATTTGAGGCATGCCCCTTT
                      ____________________________________________________________
consensus             AGTAATGCAGTTGATCCTCCATTGCGTTTGCAACTGTATGAATTTGAGGCATGCCCCTTT
 
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JMFF016A12-           TGCAGAAGGGTTCGAGAAGCTATGACTGAACTTGATCTATCTGTGGAAGTTTACCCATGT
JMSF052C20-           TGCAGAAGGGTTCGAGAAGCTATGACTGAACTTGATCTATCTGTGGAAGTTTACCCATGT
rJMSF052C20+          TGCAGAAGGGTTCGAGAAGCTATGACTGAACTTGATCTATCTGTGGAAGTTTACCCATGT
rJMFF016A12+          TGCAGAAGGGTTCGAGAAGCTATGACTGAACTTGATCTATCTGTGGAAGTTTACCCATGT
                      ____________________________________________________________
consensus             TGCAGAAGGGTTCGAGAAGCTATGACTGAACTTGATCTATCTGTGGAAGTTTACCCATGT
 
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JMFF016A12-           CCAAAGGGATCCACTAAACACAGAGAAATTGTCAGAAAATTTGGTGGAAAAGAGCAGTTT
JMSF052C20-           CCAAAGGGATCCACTAAACACAGAGAAATTGTCAGAAAATTTGGTGGAAAAGAGCAGTTT
rJMSF052C20+          CCAAAGGGATCCACTAAACACAGAGAAATTGTCAGAAAATTTGGTGGAAAAGAGCAGTTT
rJMFF016A12+          CCAAAGGGATCCACTAAACACAGAGAAATTGTCAGAAAATTTGGTGGAAAAGAGCAGTTT
                      ____________________________________________________________
consensus             CCAAAGGGATCCACTAAACACAGAGAAATTGTCAGAAAATTTGGTGGAAAAGAGCAGTTT
 
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JMFF016A12-           CCTTTCCTCATTGACCCGAATAATGGAACTTCAATCTATGAAAGCGGTGATATTGTTAAA
JMSF052C20-           CCTTTCCTCATTGACCCGAATAATGGAACTTCAATCTATGAAAGCGGTGATATTGNTAAA
rJMSF052C20+          CCTTTCCTCATTGACCCGAATAATGGAACTTCAATCTATGAAAGCGGTGATATTGTTAAA
rJMFF016A12+          CCTTTCCTCATTGACCCGAATAATGGAACTTCAATCTATGAAAGCGGTGATATTGTTAAA
                      ____________________________________________________________
consensus             CCTTTCCTCATTGACCCGAATAATGGAACTTCAATCTATGAAAGCGGTGATATTGTTAAA
 
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JMFF016A12-           TACTTATTTCAGAC                                              
JMSF052C20-           TACTTATTTCAGAC                                              
rJMSF052C20+          TACTTATTTCAGACGTATGGTGGAGGAAGGAGTCCCTCGAGTGGCCTTTTGGAAAGCACC
rJMFF016A12+          TACTTATTTCAGACGTATGGTGGAGGAAGGAGTCCCTCGAGTGGCCTTTTGGAAAGCACC
                      ____________________________________________________________
consensus             TACTTATTTCAGACGTATGGTGGAGGAAGGAGTCCCTCGAGTGGCCTTTTGGAAAGCACC
 
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rJMSF052C20+          TTATTTACGGGATGGATGCCAACGCTTCTTCGGGCGGGAAGGGGAATGACATTATGGGAA
rJMFF016A12+          TTATTTACGGGATGGATGCCAACGCTTCTTCGGGCGGGAAGGGGAATGACATTATGGGAA
                      ____________________________________________________________
consensus             TTATTTACGGGATGGATGCCAACGCTTCTTCGGGCGGGAAGGGGAATGACATTATGGGAA
 
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rJMSF052C20+          AAATCTAGCGATGAACCACCACCTAAGAAACTGGAACTTTTCTCATATGAGAACAATCCT
rJMFF016A12+          AAATCTAGCGATGAACCACCACCTAAGAAACTGGAACTTTTCTCATATGAGAACAATCCT
                      ____________________________________________________________
consensus             AAATCTAGCGATGAACCACCACCTAAGAAACTGGAACTTTTCTCATATGAGAACAATCCT
 
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rJMSF052C20+          TATGCACGGATTGTGCGCGAAGCACTTTGTGAGCTCGAGCTTCCTTACATCCTACATAAC
rJMFF016A12+          TATGCACGGATTGTGCGCGAAGCACTTTGTGAGCTCGAGCTTCCTTACATCCTACATAAC
                      ____________________________________________________________
consensus             TATGCACGGATTGTGCGCGAAGCACTTTGTGAGCTCGAGCTTCCTTACATCCTACATAAC
 
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rJMSF052C20+          GTCGGCAATGGATCAAGACGGGAAAATTTGCTTCTCAAGAAATCTGGAAAACCCGAGGTG
rJMFF016A12+          GTCGGCAATGGATCAAGACGGGAAAATTTGCTTCTCAAGAAATCTGGAAAACCCGAGGTG
                      ____________________________________________________________
consensus             GTCGGCAATGGATCAAGACGGGAAAATTTGCTTCTCAAGAAATCTGGAAAACCCGAGGTG
 
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rJMSF052C20+          CCTTACCTTATAGATCCAAATACTAACAGAAGAATTGGTGATTACAAGGAGATCATCTCT
rJMFF016A12+          CCTTACCTTATAGATCCAAATACTAACAGAAGAATTGGTGATTACAAGGAGATCATCTCT
                      ____________________________________________________________
consensus             CCTTACCTTATAGATCCAAATACTAACAGAAGAATTGGTGATTACAAGGAGATCATCTCT
 
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rJMSF052C20+          TACTTGTTTCAGACATATTCCTTGGAAGCTTCATAGTTGTCCAGTTGCATGACCACTGTG
rJMFF016A12+          TACTTGTTTCAGACATATTCCTTGGAAGCTTCATAGTTGTCCAGTTGCATGACCACTGTG
                      ____________________________________________________________
consensus             TACTTGTTTCAGACATATTCCTTGGAAGCTTCATAGTTGTCCAGTTGCATGACCACTGTG
 
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rJMSF052C20+          GATGACTGGAGCCTTTAATTTGAAGCTCTCTAAAATGTACATTTAGTATATAGACCAATT
rJMFF016A12+          GATGACTGGAGCCTTTAATTTGAAGCTCTCTAAAATGTACATTTAGTATATAGACCAATT
                      ____________________________________________________________
consensus             GATGACTGGAGCCTTTAATTTGAAGCTCTCTAAAATGTACATTTAGTATATAGACCAATT
 
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rJMSF052C20+          ACATACGCTTAAATAAACCGAGATTAAAATAC                            
rJMFF016A12+          ACATACGCTTAAATAAACCGAGATTAAAATACTATCTTCGTGGAAGAATTAAGTTATTCC
                      ____________________________________________________________
consensus             ACATACGCTTAAATAAACCGAGATTAAAATACTATCTTCGTGGAAGAATTAAGTTATTCC