Contig 006824:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C11Sequence705006824 (8)ref|XP_009594219.1|2e-05PREDICTED: NAC domain-containing protein 72 [Nicotiana tomentosiformis]
JMFF007P19Sequence572006824 (8)
JMFF010B13Sequence568006824 (8)
JMFF011K21Sequence403006824 (8)
JMFF015M13Sequence487006824 (8)
JMFN020K11Sequence313006824 (8)
JMFS014H02Sequence628006824 (8)ref|XP_009797580.1|6e-112PREDICTED: NAC domain-containing protein 72-like [Nicotiana sylvestris]
JMFS117H08Sequence590006824 (8)ref|NP_001233972.1|8e-93jasmonic acid 2 [Solanum lycopersicum] gb|AAF04915.1|AF011555_1 jasmonic acid 2

Alignment

This contig is upended


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JMFS117H08-                                              AATAGGAAAAAAAAATATTAGXXXX
                      ____________________________________________________________
consensus                                                AATAGGAAAAAAAAATATTAGNNNN
 
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JMFS117H08-           XXXXXXXXXXXXXXXXXCACACANTTTCTCAAAATTTCGGCGCCTCCATTTACAGCCTTT
JMFS014H02-                                        CAAAATTTCGGCGCCTCCATTTACAGCCTTT
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNCACACANTTTCTCAAAATTTCGGCGCCTCCATTTACAGCCTTT
 
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JMFS117H08-           GAAAGTTCAGACATGGGTGTTCGAGAAACCGACCCGCTTTCCCAGCTAAGCTTGCCGCCG
JMFS014H02-           GAAAGTTCAGACATGGGTGTTCGAGAAACCGACCCGCTTTCCCAGCTAAGCTTGCCGCCG
                      ____________________________________________________________
consensus             GAAAGTTCAGACATGGGTGTTCGAGAAACCGACCCGCTTTCCCAGCTAAGCTTGCCGCCG
 
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JMFS117H08-           GGTTTCCGGTTTTATCCGACCGACGAGGAGCTCCTGGTTCAGTACCTCTGCAAGAAGGTG
JMFS014H02-           GGTTTCCGGTTTTATCCGACCGACGAGGAGCTCCTGGTTCAGTACCTCTGCAAGAAGGTG
                      ____________________________________________________________
consensus             GGTTTCCGGTTTTATCCGACCGACGAGGAGCTCCTGGTTCAGTACCTCTGCAAGAAGGTG
 
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JMFS117H08-           GCCGGCCACGATTTCTCCCTGCGGATCATCGGAGAAATCGATTTGTACAAGTTTGACCCG
JMFS014H02-           GCCGGCCACGATTTCTCCCTGCGGATCATCGGAGAAATCGATTTGTACAAGTTTGACCCG
                      ____________________________________________________________
consensus             GCCGGCCACGATTTCTCCCTGCGGATCATCGGAGAAATCGATTTGTACAAGTTTGACCCG
 
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JMFS117H08-           TGGGTTCTCCCCAGCAAGGCGACTTTCGGCGAGAAGGAGTGGTATTTCTTCAGCCCCAGA
JMFS014H02-           TGGGTTCTCCCCAGCAAGGCGACTTTCGGCGAGAAGGAGTGGTATTTCTTCAGCCCCAGA
                      ____________________________________________________________
consensus             TGGGTTCTCCCCAGCAAGGCGACTTTCGGCGAGAAGGAGTGGTATTTCTTCAGCCCCAGA
 
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JMFS117H08-           GATCGGAAATACCCGAATGGGTCGAGGCCCAATCGGGTTGCTGGGTCCGGGTACTGGAAA
JMFS014H02-           GATCGGAAATACCCGAATGGGTCGAGGCCCAATCGGGTTGCTGGGTCCGGGTACTGGAAA
                      ____________________________________________________________
consensus             GATCGGAAATACCCGAATGGGTCGAGGCCCAATCGGGTTGCTGGGTCCGGGTACTGGAAA
 
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JMFS117H08-           GCCACCGGAACTGATAAGGTGATCACCGCTGATGGGAGAAAAGTTGGGATTAAGAAGGCT
JMFS014H02-           GCCACCGGAACTGATAAGGTGATCACCGCTGATGGGAGAAAAGTTGGGATTAAGAAGGCT
                      ____________________________________________________________
consensus             GCCACCGGAACTGATAAGGTGATCACCGCTGATGGGAGAAAAGTTGGGATTAAGAAGGCT
 
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JMFS117H08-           CTGGTTTTCTACGTCGGAAAAGCTCCCAAAGGATCCAAGACTAATTGGATCATGCACGAG
JMFS014H02-           CTGGTTTTCTACGTCGGAAAAGCTCCCAAAGGATCCAAGACTAATTGGATCATGCACGAG
                      ____________________________________________________________
consensus             CTGGTTTTCTACGTCGGAAAAGCTCCCAAAGGATCCAAGACTAATTGGATCATGCACGAG
 
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JMFS117H08-           TATCGCCTCTGTGATGCTCCGAAGAAAACT--AAGCGCTCGGCTCGATGAATGGGTGCTT
JMFS014H02-           TATCGCCTCTGTGATGCTCCGAAGAAAACTGGAAGCGCTCGGCTCGATGAATGGGTGCTT
                      ____________________________________________________________
consensus             TATCGCCTCTGTGATGCTCCGAAGAAAACTGGAAGCGCTCGGCTCGATGAATGGGTGCTT
 
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JMFS117H08-           TGCCGGATTTACAAGAAGCATTCAAGC                                 
JMFS014H02-           TGCCGGATTTACAAGAAGCATTCAAGCGCGGAGAAAGCCATGTCCGGCGGNGGGCAGAGC
rJMFF002C11+                   TACAAGAAGCATTCAAGCGCGGAGAAAGCCATGTCCGGCGGGGGGCAGAGC
                      ____________________________________________________________
consensus             TGCCGGATTTACAAGAAGCATTCAAGCGCGGAGAAAGCCATGTCCGGCGGGGGGCAGAGC
 
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JMFS014H02-           AAGGAGCAAAGCCACGGCTCGCCGTCGTCGACTTCCTCGCAGTTCGACGACATG      
rJMFF002C11+          AAGGAGCAAAGCCACGGCTCGCCGTCGTNGACTTCCTCGCAGTTCGACGACATGNTGGTG
                      ____________________________________________________________
consensus             AAGGAGCAAAGCCACGGCTCGCCGTCGTCGACTTCCTCGCAGTTCGACGACATGNTGGTG
 
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rJMFF007P19+                                CAGTCTTTCGTGCTTCCGGCGATGAAACAGGAGGAACA
rJMFF010B13+                                CAGTCTTTCGTGCTTCCGGCGATGAAACAGGAGGAACA
rJMFF011K21+                                CAGTCTTTCGTGCTTCCGGCGATGAAACAGGAGGAACA
rJMFF002C11+          GCATTGCTGNAGCTCGANCCGCCAGTCTTTCGTGCTTCCGGCGATGAAACAGGAGGAACA
                      ____________________________________________________________
consensus             GCATTGCTGNAGCTCGANCCGCCAGTCTTTCGTGCTTCCGGCGATGAAACAGGAGGAACA
 
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rJMFF007P19+          GGTGGATCTGCATGAGCTGGGCCCCGGGAGTTTCGACTGGAACACCATCTCCGCCGGTGA
rJMFF010B13+          GGTGGATCTGCATGAGCTGGGCCCCGGGAGTTTCGACTGGAACACCATCTCCGCCGGTGA
rJMFF011K21+          GGTGGATCTGCATGAGCTGGGCCCCGGGAGTTTCGACTGGAACACCATCTCCGCCGGTGA
rJMFF002C11+          GGTGGATCTGCATGAGCTGGGCCCCGGGAGTTTCGACTGGAACACCATCTCCGCCGGTGA
                      ____________________________________________________________
consensus             GGTGGATCTGCATGAGCTGGGCCCCGGGAGTTTCGACTGGAACACCATCTCCGCCGGTGA
 
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rJMFF007P19+          TTTCGGTGTCCCCGCCGCCGCCGCCGCCGGCGGAAACCAAGTTTCAGCTGCTCCGATGAC
rJMFF010B13+          TTTCGGTGTCCCCGCCGCCGCCGCCGCCGGCGGAAACCAAGTTTCAGCTGCTCCGATGAC
rJMFF011K21+          TTTCGGTGTCCCCGCCGCCGCCGCCGCCGGCGGAAACCAAGTTTCAGCTGCTCCGATGAC
rJMFF002C11+          TTTCGGTGTCCCCGCCGCCGCCGCCGCCGGCGGAAACCAAGTTTCAGCTGCTCCGATGAC
rJMFF015M13+                                                              CCGATGAC
                      ____________________________________________________________
consensus             TTTCGGTGTCCCCGCCGCCGCCGCCGCCGGCGGAAACCAAGTTTCAGCTGCTCCGATGAC
 
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rJMFF007P19+          CGGCAACGACGTGAACTACCAAAATGACATTTATGCCCATGCCCTGGCAATGAATTTTCA
rJMFF010B13+          CGGCAACGACGTGAACTACCAAAATGACATTTATGCCCATGCCCTGGCAATGAATTTTCA
rJMFF011K21+          CGGCAACGACGTGAACTACCAAAATGACATTTATGCCCATGCCCTGGCAATGAATTTTCA
rJMFF002C11+          CGGCAACGACGTGAACTACCAAAATGACATTTATGCCCATGCCCTGGCAATGAATTTTCA
rJMFF015M13+          CGGCAACGACGTGAACTACCAAAATGACATTTATGCCCATGCCCTGGCAATGAATTTTCA
                      ____________________________________________________________
consensus             CGGCAACGACGTGAACTACCAAAATGACATTTATGCCCATGCCCTGGCAATGAATTTTCA
 
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rJMFF007P19+          AGCCCCAGACGATGAAGTTCAGAGTGGGATGAGGAGTTTCTTCTTCCCACAGAGCTTTTC
JMFN020K11-                                  GTGGGATGAGGAGTTTCTTCTT-CCACAGAGCTTTTC
rJMFF010B13+          AGCCCCAGACGATGAAGTTCAGAGTGGGATGAGGAGTTTCTTCTTCCCACAGAGCTTTTC
rJMFF011K21+          AGCCCCAGACGATGAAGTTCAGAGTGGGATGAGGAGTTTCTTCTTCCCACAGAGCTTTTC
rJMFF002C11+          AGCCCCAGACGATGAAGTTCAGAGTGGGATGAGGAGTTTCTTCTTCCCACAGAGCTTTTC
rJMFF015M13+          AGCCCCAGACGATGAAGTTCAGAGTGGGATGAGGAGTTTNTTCTTCCCACAGAGCTTTTC
                      ____________________________________________________________
consensus             AGCCCCAGACGATGAAGTTCAGAGTGGGATGAGGAGTTTCTTCTTCCCACAGAGCTTTTC
 
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rJMFF007P19+          AAACTCACCCGACCCGTTTGGCATCCGTTACCCGACCCAGTCTCCCAGCTTGGGGTTCAG
JMFN020K11-           AAACTCACCCGACCCGTTTGGCATCCGTTACCCGACCCAGTCTCCCAGCTTGGGGTTCAG
rJMFF010B13+          AAACTCACCCGACCCGTTTGGCATCCGTTACCCGACCCAGTCTCCCAGCTTGGGGTTCAG
rJMFF011K21+          AAACTCACCCGACCCGTTTGGCATCCGTTACCCGACCCAGTCTCCCAGCTTGGGGTTCAG
rJMFF002C11+          AAACTCACCCGACCCGTTTGGCATCCGTTACCCGACCCAGTCTCCCAGCTTGGGGTTCAG
rJMFF015M13+          AAACTCACCCGACCCGTTTGGCATCCGTTACCCGACCCAGTCTCCCAGCTTGGGGTTCAG
                      ____________________________________________________________
consensus             AAACTCACCCGACCCGTTTGGCATCCGTTACCCGACCCAGTCTCCCAGCTTGGGGTTCAG
 
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rJMFF007P19+          ACCGTGAATATCAGCAAATTTTAGGGGCCTGTATAGCAAAAAACTCAAGGGCTTGTTTGT
JMFN020K11-           ACCGTGAATATCAGCAAATTTTAGGGGCCTGTATAGCAAAAAACTCAAGGGCTTGTTTGT
rJMFF010B13+          ACCGTGAATATCAGCAAATTTTAGGGGCCTGTATAGCAAAAAACTCAAGGGCTTGTTTGT
rJMFF011K21+          ACCGTGAATATCAGCAAATTTTAGGGGCCTGTATAGCAAAAAACTCAAGGGCTTGTTTGT
rJMFF002C11+          ACCGTGAATATCAGCAAATTTTAGGGGCCTGTATAGCAAAAAACTCAAGGGCTTGTTTGT
rJMFF015M13+          ACCGTGAATATCAGCAAATTTTAGGGGCCTGTATAGCAAAAAACTCAAGGGCTTGTTTGT
                      ____________________________________________________________
consensus             ACCGTGAATATCAGCAAATTTTAGGGGCCTGTATAGCAAAAAACTCAAGGGCTTGTTTGT
 
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rJMFF007P19+          TTGGAAT-AGAATGAGTGTAAAGGGAGGAAGAACAAAGTTTANTGCATTTTGTNGTTTGT
JMFN020K11-           TTGGAAT-AGAATGAGTGTAAAGGGAGGAAGAACAAAGTTTACTGCATTTTGTTGTTTGT
rJMFF010B13+          TTGGAAT-AGAATGAGTGTAAAGGGAGGAAGANCAAAGTTTACTGCATTTNGTTGTTTGT
rJMFF011K21+          TTG                                                         
rJMFF002C11+          TTGGAATAAGAATGAGTGTAAAGGGAGGAAGAACAAAGTTTACTGCATTTTGTTNTTTGT
rJMFF015M13+          TTGGAAT-AGAATGAGTGTAAAGGGAGGAAGAACAAAGTTTACTGCATTTTGTTGTTTGT
                      ____________________________________________________________
consensus             TTGGAAT-AGAATGAGTGTAAAGGGAGGAAGAACAAAGTTTACTGCATTTTGTTGTTTGT
 
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rJMFF007P19+          TTTGTATGCTTAGGTTTAGAATGCACAGNCCAAACAGTGAACCAAGAATGTCTTGTCTGT
JMFN020K11-           TTTGTATGCTTAGGTTTAGAATGCACAGACCAAACAGTGAACCAAGAATGTCTTGTCTGT
rJMFF010B13+          TTTGTATGCTTAGGTTTAGAATGCACAGACCAAACAGTGAACCAAGAATGTCTTGTCTGT
rJMFF002C11+          TTTGTATGCTTAGGTTTAGAATGCACAGACCAAACAGTGAACCAAGAATGTCTTGTCTGT
rJMFF015M13+          TTTGTATGCTTAGGTTTAGAATGCACAGACCAAACAGTGAACCAAGAATGTCTTGTCTGT
                      ____________________________________________________________
consensus             TTTGTATGCTTAGGTTTAGAATGCACAGACCAAACAGTGAACCAAGAATGTCTTGTCTGT
 
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rJMFF007P19+          CCATTGCACAATAAATCTCCATCTGTGTTTTGTTTTCCAACTTTCAAT            
JMFN020K11-           CCATTGCACAATAAATCTCCATCTGTGTTTTGTTTTCC                      
rJMFF010B13+          CCATTGCACAATAAATCTCCATCTGTGTTTTGTTTTCCAACTTTCAAT            
rJMFF002C11+          CCATTGCACAATAAATCTCCATCTGTGTTTTGTTTTCCAACTTTCAAT            
rJMFF015M13+          CCATTGCACAATAAATCTCCATCTGTGTTTTGTTTTCCAACTTTCAATATAATGATGTTT
                      ____________________________________________________________
consensus             CCATTGCACAATAAATCTCCATCTGTGTTTTGTTTTCCAACTTTCAATATAATGATGTTT
 
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rJMFF015M13+          TGTTTTGATTAAGTTAATAATCCCGCCCCTCTTAGCTAACTGTTTTTACTTTTTAATTAT
                      ____________________________________________________________
consensus             TGTTTTGATTAAGTTAATAATCCCGCCCCTCTTAGCTAACTGTTTTTACTTTTTAATTAT