Contig 006819:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF035J09+                                                         CATAGTAATGAAG
rJMFF013J22+                                                     TCTTCATAGTAATGAAG
                      ____________________________________________________________
consensus                                                        TCTTCATAGTAATGAAG
 
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rJMFF035J09+          ATGTTCATCTTATTCTAGGTATCGGTATGCGAGCGAGGATGGGTCTACCAGAAGGGTATT
rJMFF013J22+          ATGTTCATCTTATTCTAGGTATCGGTATGCGAGCGAGGATGGGTCTACCAGAAGGGTATT
                      ____________________________________________________________
consensus             ATGTTCATCTTATTCTAGGTATCGGTATGCGAGCGAGGATGGGTCTACCAGAAGGGTATT
 
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rJMFF035J09+          GGGGAAACGCTGTTTTCTTCATTACAGAGTCGATTAAAGCAGGGGATGTTTTAGGAAAAG
rJMFF013J22+          GGGGAAACGCTGTTTTCTTCATTACAGAGTCGATTAAAGCAGGGGATGTTTTAGGAAAAG
                      ____________________________________________________________
consensus             GGGGAAACGCTGTTTTCTTCATTACAGAGTCGATTAAAGCAGGGGATGTTTTAGGAAAAG
 
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rJMFF035J09+          GACTGGGTTGGGTAGCTTGGCAGATTAAGAAAACAGTCGAAAAGCATAGCCATGAAGAAG
rJMFF013J22+          GACTGGGTTGGGTAGCTTGGCAGATTAAGAAAACAGTCGAAAAGCATAGCCATGAAGAAG
                      ____________________________________________________________
consensus             GACTGGGTTGGGTAGCTTGGCAGATTAAGAAAACAGTCGAAAAGCATAGCCATGAAGAAG
 
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rJMFF035J09+          AAGTAAGGAAGATGTATATGAAGTTTGTAGAATCTCCGGCGCACAATGGGGCGGAGATCC
rJMFF013J22+          AAGTAAGGAAGATGTATATGAAGTTTGTAGAATCTCCGGCGCACAATGGGGCGGAGATCC
                      ____________________________________________________________
consensus             AAGTAAGGAAGATGTATATGAAGTTTGTAGAATCTCCGGCGCACAATGGGGCGGAGATCC
 
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rJMFF035J09+          CAAGCTCGTCTAATACGCTGGGCATCAGCAGCTCTCCGCGGTTCGACGTGTACGGCGCCG
rJMFF013J22+          CAAGCTCGTCTAATACGCTGGGCATCAGCAGCTCTCCGCGGTTCGACGTGTACGGCGCCG
                      ____________________________________________________________
consensus             CAAGCTCGTCTAATACGCTGGGCATCAGCAGCTCTCCGCGGTTCGACGTGTACGGCGCCG
 
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rJMFF035J09+          ATTTCGGGTGGGGAAAACCAGTTCAAGTGAGGAGCGGCGGGGGCAATAAGCTTGACGGAA
rJMFF013J22+          ATTTCGGGTGGGGAAAACCAGTTCAAGTGAGGAGCGGCGGGGGCAATAAGCTTGACGGAA
                      ____________________________________________________________
consensus             ATTTCGGGTGGGGAAAACCAGTTCAAGTGAGGAGCGGCGGGGGCAATAAGCTTGACGGAA
 
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rJMFF035J09+          AAGTGACACTTTTTGGTGGATGTGAAGAAGGGAGCGTAGACATAGAGCTCTCCATTCATC
rJMFF013J22+          AAGTGACACTTTTTGGTGGATGTGAAGAAGGGAGCGTAGACATAGAGCTCTCCATTCATC
                      ____________________________________________________________
consensus             AAGTGACACTTTTTGGTGGATGTGAAGAAGGGAGCGTAGACATAGAGCTCTCCATTCATC
 
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rJMFF035J09+          CCCACACATTACTTGGACTAGAAAACGATGCCGAATTCTTGGAGTATTTCACAATTCCAG
rJMFF013J22+          CCCACACATTACTTGGACTAGAAAACGATGCCGAATTCTTGGAGTATTTCACAATTCCAG
                      ____________________________________________________________
consensus             CCCACACATTACTTGGACTAGAAAACGATGCCGAATTCTTGGAGTATTTCACAATTCCAG
 
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rJMFF035J09+          GAAACTAATAAATAAACAATAGCATGAGAGATGACAAAACTGCATGTGTCGCCCTCGATT
rJMFF013J22+          GAAACTAATAAATAAACAATAGCATGAGAGATGACAAAACTGCATGTGTCGCCCTCGATT
                      ____________________________________________________________
consensus             GAAACTAATAAATAAACAATAGCATGAGAGATGACAAAACTGCATGTGTCGCCCTCGATT
 
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rJMFF035J09+          TCTTCTTGTTTTCTGCAAGAAGAAGGTTTCAGTTGAGGGTTATGTCTTTCTGCAGTTGTG
rJMFF013J22+          TCTTCTTGTTTTCTGCAAGAAGAAGGTTTCAGTTGAGGGTTATGTCTTTCTGCAGTTGTG
                      ____________________________________________________________
consensus             TCTTCTTGTTTTCTGCAAGAAGAAGGTTTCAGTTGAGGGTTATGTCTTTCTGCAGTTGTG
 
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rJMFF035J09+          TGTCAACTGTCAAGGGGTGGCCTCTCCCATATCGGCATTTCCTTTCTTCTCAGCTTTTTG
rJMFF013J22+          TGTCAACTGTCAAGGGGTGGCCTCTCCCATATCGGCATTTCCTTTCTTCTCAGCTTTTTG
                      ____________________________________________________________
consensus             TGTCAACTGTCAAGGGGTGGCCTCTCCCATATCGGCATTTCCTTTCTTCTCAGCTTTTTG
 
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rJMFF035J09+          GTTGGTTTGTGTCTTCTTTAACATTGAATAACATTGAAAGTGGTCTATTCACTCTAGCT 
rJMFF013J22+          GTTGGTTTGTGTCTTCTTTAACATTGAATAACA-TGAAAGTGGTCTATTCACTCTAGCTG
                      ____________________________________________________________
consensus             GTTGGTTTGTGTCTTCTTTAACATTGAATAACATTGAAAGTGGTCTATTCACTCTAGCTG