Contig 006816:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013B14Sequence560006816 (2)ref|XP_009625270.1|200PREDICTED: uncharacterized protein LOC104116173 [Nicotiana tomentosiformis]599006816 (2)ref|XP_006338421.1|116PREDICTED: uncharacterized protein LOC102602421 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF013B14-                                               ACTAGTTATTGACAATTGTTAAAC
                      ____________________________________________________________
consensus                                                 ACTAGTTATTGACAATTGTTAAAC
 
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JMFF013B14-           AGAAGAGGAACACGTCGGACCACTGCTACCGTTCCGCCTCCGCCTCCGCCGCGGGTTACG
                      ____________________________________________________________
consensus             AGAAGAGGAACACGTCGGACCACTGCTACCGTTCCGCCTCCGCCTCCGCCGCGGGTTACG
 
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JMFF013B14-           CCGTCGCGAAGGGATTATGAAGCGGATGCAGTTAAAAATAACTGATTTAAACTATGATGT
                      ____________________________________________________________
consensus             CCGTCGCGAAGGGATTATGAAGCGGATGCAGTTAAAAATAACTGATTTAAACTATGATGT
 
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JMFF013B14-           TTTGAAACATGTAGTGCACTATGTAGTGATATCGTCTGATGGAGCCGAGAACCTTGCCAG
                      ____________________________________________________________
consensus             TTTGAAACATGTAGTGCACTATGTAGTGATATCGTCTGATGGAGCCGAGAACCTTGCCAG
 
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JMFF013B14-           TGTGATATCTGTTTGCAGGTTGTTTAAGGAAGTTGCCAATGATCCGGACATCTTGAAAGC
                      ____________________________________________________________
consensus             TGTGATATCTGTTTGCAGGTTGTTTAAGGAAGTTGCCAATGATCCGGACATCTTGAAAGC
 
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JMFF013B14-           TGTAACATTTGATGATATTAAGCTCCCTGCTATCCCTGGGTCATTTTGGCAACCTTCGGG
                      ____________________________________________________________
consensus             TGTAACATTTGATGATATTAAGCTCCCTGCTATCCCTGGGTCATTTTGGCAACCTTCGGG
 
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JMFF013B14-           CCTTTTATGTACTTGTGTAGCCAAAGGAAACCGGAGTGCTTCTGACAAAGTAACTGATTA
rJMFF013B14+           CTTTTATGTACTTGTGTAGCCAAAGGAAACCGGAGTGCTTCTGACAAAGTAACTGATTA
                      ____________________________________________________________
consensus             CCTTTTATGTACTTGTGTAGCCAAAGGAAACCGGAGTGCTTCTGACAAAGTAACTGATTA
 
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JMFF013B14-           TGCAGAAATGCTCAATGCAACTCATAAGGTCCTTAAAAGGGATATGTTCCGTGCAAAGAT
rJMFF013B14+          TGCAGAAATGCTCAATGCAACTCATAAGGTCCTTAAAAGGGATATGTTCCGTGCAAAGAT
                      ____________________________________________________________
consensus             TGCAGAAATGCTCAATGCAACTCATAAGGTCCTTAAAAGGGATATGTTCCGTGCAAAGAT
 
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JMFF013B14-           GATTCTCATGGCGAGAAATAGAGCGGTTGAAACTGTAAATACAAGGGCGAGGAAGAAGGC
rJMFF013B14+          GATTCTCATGGCGAGAAATAGAGCGGTTGAAACTGTAAATACAAGGGCGAGGAAGAAGGC
                      ____________________________________________________________
consensus             GATTCTCATGGCGAGAAATAGAGCGGTTGAAACTGTAAATACAAGGGCGAGGAAGAAGGC
 
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JMFF013B14-           CCTGGATTCAGCAATAGATGAGTGCACGAAGACCTGTGATGCTGTTGATGCTCAAC    
rJMFF013B14+          CCTGGATTCAGCAATAGATGAGTGCACGAAGACCTGTGATGCTGTTGATGCTCAACTACA
                      ____________________________________________________________
consensus             CCTGGATTCAGCAATAGATGAGTGCACGAAGACCTGTGATGCTGTTGATGCTCAACTACA
 
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rJMFF013B14+          AAGAACGGAGCAGTTCTTGGAGATGCTCAATGCAGTGCAGAGAGGTACTAAGCACGCTAA
                      ____________________________________________________________
consensus             AAGAACGGAGCAGTTCTTGGAGATGCTCAATGCAGTGCAGAGAGGTACTAAGCACGCTAA
 
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rJMFF013B14+          ATGAACGGCTTTTGCTGGTCTAGAAGAGCTATTCATATTACTGGTGTAAATTTGCAGAGA
                      ____________________________________________________________
consensus             ATGAACGGCTTTTGCTGGTCTAGAAGAGCTATTCATATTACTGGTGTAAATTTGCAGAGA
 
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rJMFF013B14+          AACTACTTCTTCCGGAATGCAGCGGGAGCTGTGGGATATCGTAGAAATATGCAAGCTAAA
                      ____________________________________________________________
consensus             AACTACTTCTTCCGGAATGCAGCGGGAGCTGTGGGATATCGTAGAAATATGCAAGCTAAA
 
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rJMFF013B14+          GATCTCATTCCCGGGGAGGGTCGTATTGTTTTTATTTCAATTGTTGGCAGAAGAAGATGA
                      ____________________________________________________________
consensus             GATCTCATTCCCGGGGAGGGTCGTATTGTTTTTATTTCAATTGTTGGCAGAAGAAGATGA
 
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rJMFF013B14+          CATTGAAGAGGCCTTAGCCTATCTCTCCTCAAAACATATAGCCATGTATGTAATTTCGAG
                      ____________________________________________________________
consensus             CATTGAAGAGGCCTTAGCCTATCTCTCCTCAAAACATATAGCCATGTATGTAATTTCGAG
 
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rJMFF013B14+          GCTGCTAGAGGATTTTTGCTTTCGGTTTGTAGTGCTATTGTTCTAGCTTTCTACATCATA
                      ____________________________________________________________
consensus             GCTGCTAGAGGATTTTTGCTTTCGGTTTGTAGTGCTATTGTTCTAGCTTTCTACATCATA