| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004G17 | Sequence | 577 | 011470 (5) | ref|XP_009609918.1| | 9e-28 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 666 | 006807 (5) | |||
| JMFF010P18 | Sequence | 544 | 011470 (5) | ref|XP_009609918.1| | 3e-46 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 798 | 006807 (5) | ref|XP_009774529.1| | 3e-23 | PREDICTED: probable folate-biopterin transporter 3 [Nicotiana sylvestris] |
| JMSF022E23 | Sequence | 707 | 011470 (5) | ref|XP_009609918.1| | 6e-96 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 123 | 006807 (5) | |||
| JMSF025A16 | Sequence | 676 | 011470 (5) | ref|XP_009609918.1| | 4e-67 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 772 | 006807 (5) | ref|XP_009774529.1| | 1e-21 | PREDICTED: probable folate-biopterin transporter 3 [Nicotiana sylvestris] |
| JMSF028I24 | Sequence | 482 | 011470 (5) | ref|XP_009609918.1| | 6e-41 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 657 | 006807 (5) | ref|XP_009774529.1| | 2e-06 | PREDICTED: probable folate-biopterin transporter 3 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF025A16+ TCTTNAACGNTACACGCACAC
rJMFF010P18+ AACGTTACACGCACAC
____________________________________________________________
consensus TCTTNAACGTTACACGCACAC
. : . : . : . : . : . :
rJMSF025A16+ NATTCGACNACCTCGGGACAGTCATTGTGATTAGGAGTTTATTGAGAGTCTTGCCGATAG
rJMFF010P18+ AATTCGACANCNTCGGGACAGTCATTGTGATTAGGAGTTTATTGAGAGTCTTGCCGATAG
____________________________________________________________
consensus AATTCGACAACCTCGGGACAGTCATTGTGATTAGGAGTTTATTGAGAGTCTTGCCGATAG
. : . : . : . : . : . :
rJMSF028I24+ GACCCGAACGCTTCCATTCTCCCAACCGAAATGT
rJMSF025A16+ GGCTTTTGTTTTTGGTGCCCAGCAGTGACCCGAACGCTTCCATTCTCCCAACCGAAATGT
rJMFF004G17+ CCCAACNGAAATGT
rJMFF010P18+ GGCTTTTGTTTTTGGTGCCCAGCAGTGACCCGAACGCTTCCATTCTCCCAACCGAAATGT
____________________________________________________________
consensus GGCTTTTGTTTTTGGTGCCCAGCAGTGACCCGAACGCTTCCATTCTCCCAACCGAAATGT
. : . : . : . : . : . :
rJMSF028I24+ TGCCAACTAAGAAGGGCGAAGATTCAGCGAAAACCGATAATATGGAAATGGCCGCGCTTA
rJMSF025A16+ TGCCAACTAAGAAGGGCGAAGATTCAGCGAAAACCGATAATATGGAAATGGCCGCGCTTA
rJMFF004G17+ TGCCAACTAAGAAGGGCGAAGATTCAGCGAAAACCGATAATATGGAAATGGCCGCGCTTA
rJMFF010P18+ TGCCAACTAAGAAGGGCGAAGATTCAGCGAAAACCGATAATATGGAAATGGCCGCGCTTA
____________________________________________________________
consensus TGCCAACTAAGAAGGGCGAAGATTCAGCGAAAACCGATAATATGGAAATGGCCGCGCTTA
. : . : . : . : . : . :
rJMSF028I24+ TCAACCCAGTAGACCAGACTTTAGCCAAGGAATGAGCAAAAAAGAAGGCATGTTACTATC
rJMSF025A16+ TCAACCCAGTAGACCAGACTTTAGCCAAGGAATGAGCAAAAAAGAAGGCATGTTACTATC
rJMFF004G17+ TCAACCCAGTAGACCAGACTTTAGCCAAGGAATGAGCAAAAAAGGAGGCATGTTACTATC
rJMFF010P18+ TCAACCCAGTAGACCAGACTTTAGCCAAGGAATGAGCAAAAAAGAAGGCATGTTACTATC
____________________________________________________________
consensus TCAACCCAGTAGACCAGACTTTAGCCAAGGAATGAGCAAAAAAGAAGGCATGTTACTATC
. : . : . : . : . : . :
rJMSF028I24+ ACCCGCAAGAAGAAAAAAGATTTCCAGGTTTTATAAGTGTCTGGAGAAGCATAAGATTAT
rJMSF025A16+ ACCCGCAAGAAGAAAAAAGATTTCCAGGTTTTATAAGTGTCTGGAGAAGCATAAGATTAT
rJMFF004G17+ ACCCGCAAGAAGAAAAAAGATTTCCAGGTTTTATAAGTGTCTGGAGAAGCATAAGATTAT
rJMFF010P18+ ACCCGCAAGAAGAAAAAAGATTTCCAGGTTTTATAAGTGTCTGGAGAAGCATAAGATTAT
____________________________________________________________
consensus ACCCGCAAGAAGAAAAAAGATTTCCAGGTTTTATAAGTGTCTGGAGAAGCATAAGATTAT
. : . : . : . : . : . :
rJMSF028I24+ GCTCCGGAGATAGATCTCTACTAACTCTTCGGTAAGAAANTGGTGCCCGCTGATTCAGGT
rJMSF025A16+ GCTCCGGAGATAGATCTCTACTAACTCTTCGGTAAGAAATTGGTGCCCGCTGATTCAGGT
rJMFF004G17+ GCTCCGGAGATAGATCTCTACTAACTCTTCGGTAAGAAATTGGTGCCCGCTGATTCAGGT
rJMFF010P18+ GCTCCGGAGATAGATCTCTACTAACTCTTCGGTAAGAAATTGGTGCCCGCTGATTCAGGT
____________________________________________________________
consensus GCTCCGGAGATAGATCTCTACTAACTCTTCGGTAAGAAATTGGTGCCCGCTGATTCAGGT
. : . : . : . : . : . :
rJMSF028I24+ TCTGATAAAGCTGGCTTTCTACAGTTTATACACATTTGTACAAATTCCATTCTCTCCGAT
rJMSF022E23+ CAGTTTATACACANTTGTACAAATTCCNTTCTNTCCGNT
rJMSF025A16+ TCTGATAAAGCTGGCTTTCTACAGTTTATACACATTTGTACAAATTCCATTCTCTCCGAT
rJMFF004G17+ TCTGATAAAGCTGGCTTTCTACAGTTTATACACATTTGTACAAATTCCATTCTCTCCGAT
rJMFF010P18+ TCTGATAAAGCTGGCTTTCTACATTTTATACACATTTGTACAAATTCCATTCTCTCCGAT
____________________________________________________________
consensus TCTGATAAAGCTGGCTTTCTACAGTTTATACACATTTGTACAAATTCCATTCTCTCCGAT
. : . : . : . : . : . :
rJMSF028I24+ ATAACTAAATCTGGGCACGTTTTGCTGCAATATGGAGGGGCAAACAGAATCATTTTTAGC
rJMSF022E23+ ANAACTAAATCTGGGCACGNTNTGCTGCAATANGGAGGGGCAAACAGAATCATTTTTAGC
rJMSF025A16+ ATAACTAAATCTGGGCACGTTTTGCTGCAATATGGAGGGGCAAACAGAATCATTTTTAGC
rJMFF004G17+ ATAACTAAATCTGGGCACGTTTTGCTGCAATATGGAGGGGCAAACAGAATCATTTTTAGC
rJMFF010P18+ ATAACTAAATCTGGGCACGTTTTGCTGCAATATGGAGGGGCAAACAGAATCATTTTTAGC
____________________________________________________________
consensus ATAACTAAATCTGGGCACGTTTTGCTGCAATATGGAGGGGCAAACAGAATCATTTTTAGC
. : . : . : . : . : . :
rJMSF028I24+ TGGAGCCTTTAACCACTTTTATTTACCATTTTGGCTCAAAGATTCGGGAGCTCGGTCCCC
rJMSF022E23+ TGGAGCCTTTAACCA
rJMSF025A16+ TGGAGCCTTTAACCACTTTTATTTACCATTTTGGCTCAAAGATTCGGGAGCTCGGTCCCC
rJMFF004G17+ TGGAGCCTTTAACCACTTTTATTTACCATTTTGGCTCAAAGATTCGGGAGCTCGGTCCCC
rJMFF010P18+ TGGAGCCTTTAACCACTTTTATTTACCATTTTGGCTCAAAGATTCGGGAGCTCGGTCCCC
____________________________________________________________
consensus TGGAGCCTTTAACCACTTTTATTTACCATTTTGGCTCAAAGATTCGGGAGCTCGGTCCCC
. : . : . : . : . : . :
rJMSF028I24+ AACACATTCCATGTGGACCCATGTATCGTTTTTTTATGCCTGCAGAGAATACGCCATTAC
rJMSF025A16+ AACACATTCCATGTGGACCCATGTATCGTTTTTTTATGCCTGCAGAGAATACGCCATTAC
rJMFF004G17+ AACACATTCCATGTGGACCCATGTATCGTTTTTTTATGCCTGCAGAGAATACGCCATTAC
rJMFF010P18+ AACACATTCCATGTGGACCCATGTATCGTTTTTTTATGCCTGCAGAGAATACGCCATTAC
____________________________________________________________
consensus AACACATTCCATGTGGACCCATGTATCGTTTTTTTATGCCTGCAGAGAATACGCCATTAC
. : . : . : . : . : . :
rJMSF028I24+ ATTACAGATTCTGGGTTTCCTGCAGGAATGACAGTTTTTACGAGTAAACTATGCGTATCA
rJMSF025A16+ ATTACAGATTCTGGGTTTCCTGCAGGAATGACAGTTTTTACGAGTAAACTATGCATATCA
rJMFF004G17+ ATTACAGATTCTGGGTTTCCTGCAGGAATGACAGTTTTTACGAGTAAACTATGCATATCA
rJMFF010P18+ ATTACAGATTCTGGGTTTCCTGCAGGAATGACAGTTTTTACGAGTAAACTATGCATATCA
____________________________________________________________
consensus ATTACAGATTCTGGGTTTCCTGCAGGAATGACAGTTTTTACGAGTAAACTATGCATATCA
. : . : . : . : . : . :
rJMSF028I24+ TATATTTTCTGATCTAGTACAACAGTATTCACCGTCTTTTACCTTGTCCGTTTGTAGCAT
rJMSF025A16+ TATATTTTCTGATCTAGTACAACAGTATTCACCGTCTTTTACCTTGTCCGTTTGTAGCAT
rJMFF004G17+ TATATTTTCTGATCTAGTACAACAGTATTCACCGTCTTTTACCTTGTCCGTTTGTAGCAT
rJMFF010P18+ TATATTTTCTGATCTAGTACAACAGTATTCACCGTCTTTTACCTTGTCCGTTTGTAGCAT
____________________________________________________________
consensus TATATTTTCTGATCTAGTACAACAGTATTCACCGTCTTTTACCTTGTCCGTTTGTAGCAT
. : . : . : . : . : . :
rJMSF028I24+ NCCCTGACTTTTGATGTCTCTAA
rJMSF025A16+ -CCCTGACTTTTGATGTCTCTAAACACAGTTT
rJMFF004G17+ -CCCTGACTTTTGATGTCTCTAAACACAGTTTGTTTATTACCCATTTGCATTT
rJMFF010P18+ -CCCTGACTTTTGATGTCTCTAAACACAGTTTGTTTATTACCCATTTGCATTTATATATT
____________________________________________________________
consensus -CCCTGACTTTTGATGTCTCTAAACACAGTTTGTTTATTACCCATTTGCATTTATATATT