Contig 006805:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004I20Sequence498009168 (5)ref|XP_009802962.1|8e-22PREDICTED: R3H domain-containing protein 2-like isoform X1 [Nicotiana sylvestri690006805 (4)
JMFF010K03Sequence611009168 (5)ref|XP_009802962.1|3e-48PREDICTED: R3H domain-containing protein 2-like isoform X1 [Nicotiana sylvestri688006805 (4)
JMSF002P05Sequence276009168 (5)750006805 (4)emb|CDO99895.1|1e-19unnamed protein product [Coffea canephora]
JMSF008H11Sequence285009168 (5)ref|XP_010312532.1|49.7PREDICTED: R3H domain-containing protein 2-like [Solanum lycopersicum]652006805 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF002P05+ GTTATGTTCCAACGGAGACCATGATTC
                      ____________________________________________________________
consensus GTTATGTTCCAACGGAGACCATGATTC
 
. : . : . : . : . : . :
rJMSF002P05+ CTCCATTTGGTCCCAATCATGTTGTCATGCATTCAAACTCTGCTTTATACTTGCACTCAG
                      ____________________________________________________________
consensus CTCCATTTGGTCCCAATCATGTTGTCATGCATTCAAACTCTGCTTTATACTTGCACTCAG
 
. : . : . : . : . : . :
rJMSF002P05+ CTCAGTATCCACGCCAGCACCCTGGAATGCCCTTCATCCATCATCATGAACAAGTTCAAG
rJMFF004I20+ CAGCNCCCTGGAATGCCCTTCATCCATCATCATGAACAAGTTCAAG
rJMSF008H11+ CATCATCATGAACAAGTTCAAG
rJMFF010K03+ CATCATCATGAACAAGTTCAAG
                      ____________________________________________________________
consensus CTCAGTATCCACGCCAGCACCCTGGAATGCCCTTCATCCATCATCATGAACAAGTTCAAG
 
. : . : . : . : . : . :
rJMSF002P05+ GTCACCCATCCTTTTCACAGTCTCATCAGCAGCTTCTGGAGCGAAGTTTTGGATTGGCCC
rJMFF004I20+ GTCACCCATCCTTTTCACAGTCTCATCAGCAGCTTNTGGAGNGAAGTTTTGGATTGGCCC
rJMSF008H11+ GTCNCCCATCCTTTTCACAGTNTCATCAGCAGCTTNTGGAGCGAAGNTTTGGAATGGNCC
rJMFF010K03+ GTCACCCATCCTTTTCACAGTNTCATCAGCAGCTTNTGGAGCGAAGTTTTGGATTGGCCC
                      ____________________________________________________________
consensus GTCACCCATCCTTTTCACAGTCTCATCAGCAGCTTCTGGAGCGAAGTTTTGGATTGGCCC
 
. : . : . : . : . : . :
rJMSF002P05+ GGCCCCAATAAGGGGCGTAGGCCATGCCTGCATCCTGCCATATTTCGA-GTAGCTGGTAG
rJMFF004I20+ GGCCCCAATAAGGGGCGTAGGCCATGCCTGCATCCTGCCATATTTCGAGGGAGCTGGTAG
rJMSF008H11+ GGCCCCNATAAGGGGCGTNGGCCNTGCCTGCATCCTNCCATATTTCGAGGGAGCTGGTAG
rJMFF010K03+ GGCCCCAATAAGGGGCGTAGGCCATGCCTGCATCCTGCCATATTTCGAGGGAGCTGGTAG
                      ____________________________________________________________
consensus GGCCCCAATAAGGGGCGTAGGCCATGCCTGCATCCTGCCATATTTCGAGGGAGCTGGTAG
 
. : . : . : . : . : . :
rJMSF002P05+ TGGAGCAGCACGTTAATTGCAAATTTGCAATTCGCAGGATGTAGGCATATGCAGCCGAGG
rJMFF004I20+ TGGAGCAGCACGTTAATTGCAAATTTGCAATTCGCAGGATGTAGGCATATGCAGCCGAGG
rJMSF008H11+ TGGAGCAGCNCGTTAATTGCAAATTTGCAATTNGCNGGATGTAGGCATATGCAGCCGAGG
rJMFF010K03+ TGGAGCAGCACGTTAATTGCAAATTTGCAATTCGCAGGATGTAGGCATATGCAGCCGAGG
                      ____________________________________________________________
consensus TGGAGCAGCACGTTAATTGCAAATTTGCAATTCGCAGGATGTAGGCATATGCAGCCGAGG
 
. : . : . : . : . : . :
rJMSF002P05+ GCTTGTTGGACTGGATACGCAAACTTTGCAACTATTCTCTTCTGTCCACTCTTCATGGAC
rJMFF004I20+ GCTTGTTGGACTGGATACGCAAACTTTGCAACTATTCTNTTCTGTCCACTNTTCATGGAC
rJMSF008H11+ GCTTGTTGGACTGGATACGCAAACTTTGCAACTATTCTNTTCTGTCCNCTNTTCATGGNC
rJMFF010K03+ GCTTGTTGGACTGGATACGCAAACTTTGCAACTATTNTNTTCTGTCCACTNTTCATGGAC
                      ____________________________________________________________
consensus GCTTGTTGGACTGGATACGCAAACTTTGCAACTATTCTCTTCTGTCCACTCTTCATGGAC
 
. : . : . : . : . : . :
rJMSF002P05+ CTTGGCTTTATTGAGCTCCTGAATTTGAGGAAGCTCTTACTTCCTGAGAGTTCCATTGTT
rJMFF004I20+ CTTGGCTTTATTGAGCTCCTGAATTTGAGGAAGCTNTTACTTCCTGAGAGTTCCATTGTT
rJMSF008H11+ CTTGGCTTTATTGAGCTCCTGAATTTGAGGAAGCTNTTACTTCCTGAGAGTTCCNTTGTT
rJMFF010K03+ CTTGGCTTTATTGAGCTCCTGAATTTGAGGAAGCTNTTACTTCCTGAGAGTTCCATTGTT
                      ____________________________________________________________
consensus CTTGGCTTTATTGAGCTCCTGAATTTGAGGAAGCTCTTACTTCCTGAGAGTTCCATTGTT
 
. : . : . : . : . : . :
rJMSF002P05+ AACAATACTCCTGGAGCCCTGATTGCAATCAATAGAGATGATGATGACAATTGAAGGAAC
rJMFF004I20+ AACAATACTCCTGGAGCCCTGATTGCAATCAATAGAGATGATGATGACAATTGAAGGAAC
rJMSF008H11+ AACAATACTCCTGGAGCCCTGATTGCNATCNATAGAGATGATGATGACAATTGAAGGAAC
rJMFF010K03+ AACAATACTCCTGGAGCCCTGATTGCAATCAATAGAGATGATGATGACAATTGAAGGAAC
                      ____________________________________________________________
consensus AACAATACTCCTGGAGCCCTGATTGCAATCAATAGAGATGATGATGACAATTGAAGGAAC
 
. : . : . : . : . : . :
rJMSF002P05+ AAGAAGTTAGAGCTGTAAACGCAGGCTTGTTCTTTGTTGGTTGATGTACGTCTGACATGA
rJMFF004I20+ AAGAAGTTAGAGCTGTAAACGCAGGCTTGTTCTTTGTTGGTTGATGTACGTNTGACATGA
rJMSF008H11+ NAGAAGTTAGAGCTGTAAACGCNGGCTTGTTCTTTGTTGGTTGATGTACGTNTGACNTGA
rJMFF010K03+ AAGAAGTTAGAGCTGTAAACGCAGGCTTGTTCTTTGTTGGTTGATGTACGTNTGACATGA
                      ____________________________________________________________
consensus AAGAAGTTAGAGCTGTAAACGCAGGCTTGTTCTTTGTTGGTTGATGTACGTCTGACATGA
 
. : . : . : . : . : . :
rJMSF002P05+ TGCCTTAAGTTGATAATGCTCCACCAAAGTAAAGCATGGAAGAAATATGCAGTTTGTTGA
rJMFF004I20+ TGCCTTAAGTTGATAATGCTCCACCAAAGTAAAGCATGGAAGAAATATGCAGTTTGTTGA
rJMSF008H11+ TGCCTTAAGTTGATAATGCTCCCCCAAAGTAAAGCNTGGAAGAAATATGCNGTTTGTTGA
rJMFF010K03+ TGCCTTAAGTTGATAATGCTCCACCAAAGTAAAGCATGGAAGAAATATGCAGTTTGTTGA
                      ____________________________________________________________
consensus TGCCTTAAGTTGATAATGCTCCACCAAAGTAAAGCATGGAAGAAATATGCAGTTTGTTGA
 
. : . : . : . : . : . :
rJMSF002P05+ GGGACATGTGAAAAAGCAGCAGGCAGACAGGTAGAGCTGTGAGAGCTTTAGGGCTCTGCC
rJMFF004I20+ NGGACATGTGAAAAAGCAGCAGGCAGACAGGTAGAGCTGTGAGAGCTTTAGGGCTCTGCC
rJMSF008H11+ GGGACNTGTGAAAAAGCNGCNGGCNGACNGGTAGAGCTGTGAGAGCTTTAGGGCTCTGCC
rJMFF010K03+ GGGACATGTGAAAAAGCAGCAGGCAGACAGGTAGAGCTGTGAGAGCTTTAGGGCTNTGCC
                      ____________________________________________________________
consensus GGGACATGTGAAAAAGCAGCAGGCAGACAGGTAGAGCTGTGAGAGCTTTAGGGCTCTGCC
 
. : . : . : . : . : . :
rJMSF002P05+ GAGTGATGACTATGATTGTAGG-AAACCCTGGTTGCCTAATGATTTCTCTGTAC
rJMFF004I20+ GAGTGATGACTATGATTGTAGG-AAACCCTGGTTGCCTAATGATTTCTCTGTACATGAAA
rJMSF008H11+ GNGTGATGACTATGATTGTAGGAAAACCCTGGTTGCCTAATGATTTCTCTGTACNTGAAA
rJMFF010K03+ GAGTGATGACTATGATTGTAGG-AAACCCTGGTTGCCTAATGATTTCTCTGTACATGAAA
                      ____________________________________________________________
consensus GAGTGATGACTATGATTGTAGG-AAACCCTGGTTGCCTAATGATTTCTCTGTACATGAAA
 
. : . : . : . : . : . :
rJMFF004I20+ TTGAACACATTGAAATATTCATCTATCATTTGCGTCCTC
rJMSF008H11+ TTGNACNCNNTGAAATATTCATCTATCATT
rJMFF010K03+ TTGAACACATTGAAATATTCATCTATCATTTGCGTCCTCCAATTCCTGTTATCACAAACT
                      ____________________________________________________________
consensus TTGAACACATTGAAATATTCATCTATCATTTGCGTCCTCCAATTCCTGTTATCACAAACT