Contig 006804:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008C01Sequence268000048 (5)ref|XP_010318068.1|3e-05PREDICTED: uncharacterized protein LOC101255670 isoform X2 [Solanum lycopersicu679006804 (3)ref|XP_006347538.1|146PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]
JMFF010I14Sequence617000048 (5)ref|XP_009629933.1|228PREDICTED: uncharacterized protein LOC104119994 [Nicotiana tomentosiformis]742006804 (3)ref|XP_006347538.1|179PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]
JMSF018E11Sequence505000048 (5)ref|XP_009629933.1|195PREDICTED: uncharacterized protein LOC104119994 [Nicotiana tomentosiformis]765006804 (3)ref|XP_006347538.1|215PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF018E11+                                              AGTTCCAGGACGTTCAAATGCAAT
                      ____________________________________________________________
consensus                                                 AGTTCCAGGACGTTCAAATGCAAT
 
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rJMSF018E11+          CAATANTGCTGAAAGGCTTGGNATTCCAAAGGTGATTCTGGATAATGCTCGTGAACTTTA
rJMFF010I14+                                                TGGATAATGCTCGTGANCTTTA
                      ____________________________________________________________
consensus             CAATANTGCTGAAAGGCTTGGNATTCCAAAGGTGATTCTGGATAATGCTCGTGAACTTTA
 
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rJMSF018E11+          TGGAGTAGCAAATGCAGAAATTAATGAGGTTATACTTGATATGGAGAGATTTAAGCAGAA
rJMFF008C01+                                                  ATGGAGAGATTTAAGCAGAA
rJMFF010I14+          TGGAGTAGCAAATGCAGAAATTAATGAGGTTATACTTGATATGGAGAGATTTAAGCAGAA
                      ____________________________________________________________
consensus             TGGAGTAGCAAATGCAGAAATTAATGAGGTTATACTTGATATGGAGAGATTTAAGCAGAA
 
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rJMSF018E11+          ATTTCATGAGCAAATTCACGAGGCTCAACATTACTTGAAGGTCTCAAGAGAACTTCATCA
rJMFF008C01+          ATTTCATGAGCAAATTCACGAGGCTCAACATTACTTGAAGGTCTCAAGAGAACTTCATCA
rJMFF010I14+          ATTTCATGAGCAAATTCACGAGGCTCAACATTACTTGAAGGTCTCAAGAGAACTTCATCA
                      ____________________________________________________________
consensus             ATTTCATGAGCAAATTCACGAGGCTCAACATTACTTGAAGGTCTCAAGAGAACTTCATCA
 
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rJMSF018E11+          GAAGTTACTTGTCACCAGAAAGAGAATCACTGAGCATGGCATTGAACAAAGATACAGGAA
rJMFF008C01+          GAAGTTACTTGTCACCAGAAAGAGAATCACTGAGCATGGCATTGAACAAAGATACAGGAA
rJMFF010I14+          GAAGTTACTTGTCACCAGAAAGAGAATCACTGAGCATGGCATTGAACAAAGATACAGGAA
                      ____________________________________________________________
consensus             GAAGTTACTTGTCACCAGAAAGAGAATCACTGAGCATGGCATTGAACAAAGATACAGGAA
 
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rJMSF018E11+          GATAGAAGAAATGTCTCGGGTAGCAGCAGCAGCGCGCTCTGCACTTCACAGGAGAGCACG
rJMFF008C01+          GATAGAAGAAATGTCTCGGGTAGCAGCAGCAGCGCGCTCTGCACTTCACAGGAGAGCACG
rJMFF010I14+          GATAGAAGAAATGTCTCGGGTAGCAGCAGCAGCGCGCTCTGCACTTCACAGGAGAGCACG
                      ____________________________________________________________
consensus             GATAGAAGAAATGTCTCGGGTAGCAGCAGCAGCGCGCTCTGCACTTCACAGGAGAGCACG
 
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rJMSF018E11+          ACAATTTCGTGCATCTCCTAGGCAACCTTCTGAAACAAATTCAAACAACGGACAGTACAC
rJMFF008C01+          ACAATTTCGTGCATCTCCTAGGCAACCTTNTGAAACAAATTCAAACAACGGACAGTACAC
rJMFF010I14+          ACAATTTCGTGCATCTCCTAGGCAACCTTCTGAAACAAATTCAAACAACGGACAGTACAC
                      ____________________________________________________________
consensus             ACAATTTCGTGCATCTCCTAGGCAACCTTCTGAAACAAATTCAAACAACGGACAGTACAC
 
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rJMSF018E11+          TTCAGCATTGGAAAGTGACAATACTAACAAGACATTGGAAATCGAAACATGTGAAGCTAC
rJMFF008C01+          TTCAGCATTGGAAAGTGACAATACTAACAAGACATTGGAAATCGAAACATGTGAAGCTAC
rJMFF010I14+          TTCAGCATTGGAAAGTGACAATACTAACAAGACATTGGAAATCGAAACATGTGAAGCTAC
                      ____________________________________________________________
consensus             TTCAGCATTGGAAAGTGACAATACTAACAAGACATTGGAAATCGAAACATGTGAAGCTAC
 
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rJMSF018E11+          CACCATGGCTGAGAGCGCAGTCAACAACTTAAAGCCACGTGTTTCAGCGCAAAAGAGGGC
rJMFF008C01+          CACCATGGCTGAGAGCGCAGTCAACAACTTAAAGCCACGTGTTTCAGCGCAAAAGAGGGC
rJMFF010I14+          CACCATGGCTGAGAGCGCAGTCAACAACTTAAAGCCACGTGTTTCAGCGCAAAAGAGGGC
                      ____________________________________________________________
consensus             CACCATGGCTGAGAGCGCAGTCAACAACTTAAAGCCACGTGTTTCAGCGCAAAAGAGGGC
 
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rJMSF018E11+          TGGACTTCCCAACGTGGGTGATGCAGTGCATATTGTTTCCCTAGGCAGGAAAGCTCTTGT
rJMFF008C01+          TGGACTTCCCAACGTGGGTGATGCAGTGCATATTGTTTCCCTAGGCAGGAAAGCTCTTGT
rJMFF010I14+          TGGACTTCCCAACGTGGGTGATGCAGTGCATATTGTTTCCCTAGGCAGGAAAGCTCTTGT
                      ____________________________________________________________
consensus             TGGACTTCCCAACGTGGGTGATGCAGTGCATATTGTTTCCCTAGGCAGGAAAGCTCTTGT
 
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rJMSF018E11+          CCTAAAAGTGGATTCTTCTCGAGATGAAGTCGTAGTTCAAGCCGGTAACCTGAAGCTTAA
rJMFF008C01+          CCTAAAAGTGGATTCTTCTCGAGATGAAGTCGTAGTTCAAGCCGGTAACCTGAAGCTTAA
rJMFF010I14+          CCTAAAAGTGGATTCTTCTCGAGATGAAGTCGTAGTTCAAGCCGGTAACCTGAAGCTTAA
                      ____________________________________________________________
consensus             CCTAAAAGTGGATTCTTCTCGAGATGAAGTCGTAGTTCAAGCCGGTAACCTGAAGCTTAA
 
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rJMSF018E11+          ATTGAAAGCATCAGATGTAACTTAACAGCTAGGTGTTCATCATCCCTTGAGCTCAGATGT
rJMFF008C01+          ATTGAAAGCATCAGATGTAACTTAACAGCTAGGTGTTCATCATCCCTTGAGCTCAGATGT
rJMFF010I14+          ATTGAAAGCATCAGATGTAACTTAACAGCTAGGTGTTCATCATCCCTTGAGCTCAGATGT
                      ____________________________________________________________
consensus             ATTGAAAGCATCAGATGTAACTTAACAGCTAGGTGTTCATCATCCCTTGAGCTCAGATGT
 
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rJMSF018E11+          ATTTCGTGGCTTGCCAATAGCTATTAATACTAGTGCAGTGCATGACTTTCTGCCTCGGCA
rJMFF008C01+          ATTTCGTGGCTTGCCAATAGCTATTAATACTAGTGCAGTGCATGACTTTCTGCCTCGGCA
rJMFF010I14+          ATTTCGTGGCTTGCCAATAGCTATTAATACTAGTGCAGTGCATGACTTTCTGCCTCGGCA
                      ____________________________________________________________
consensus             ATTTCGTGGCTTGCCAATAGCTATTAATACTAGTGCAGTGCATGACTTTCTGCCTCGGCA
 
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rJMSF018E11+          TAAAGTACCTTCCTC                                             
rJMFF008C01+          TAAAGTACCTTCCTCAATTGTA-TTTCCCACGTATATATTTGGTGCGATATATATATCGT
rJMFF010I14+          TAAAGTACCTTCCTCAATTGTATTTTCCCACGTATATATTTGGTGCGATATATATATCGT
                      ____________________________________________________________
consensus             TAAAGTACCTTCCTCAATTGTATTTTCCCACGTATATATTTGGTGCGATATATATATCGT