Contig 006801:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF024L22-                                                               GACAAGCC
                      ____________________________________________________________
consensus                                                                 GACAAGCC
 
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JMSF024L22-           ATGTCTTAATCTACAGTCTTAACTTGTAGCTCTCTCACTTTCACACTTGTCCATGAAGAC
                      ____________________________________________________________
consensus             ATGTCTTAATCTACAGTCTTAACTTGTAGCTCTCTCACTTTCACACTTGTCCATGAAGAC
 
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JMSF024L22-           AATTAACCTTGCTCTTCTCAGGTGCCACCTTTTATTTTCAGTGTTTTTCTAAGTAGTAGT
                      ____________________________________________________________
consensus             AATTAACCTTGCTCTTCTCAGGTGCCACCTTTTATTTTCAGTGTTTTTCTAAGTAGTAGT
 
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JMSF024L22-           GAAAGCCATGGCAAAGAAGAAGAGCTGGTGCAGTGTTCTGAAAAGGCTTATTGTTCTGGG
                      ____________________________________________________________
consensus             GAAAGCCATGGCAAAGAAGAAGAGCTGGTGCAGTGTTCTGAAAAGGCTTATTGTTCTGGG
 
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JMSF024L22-           GAGGGAGGCCAGATTAGAGAAGGCGAAGCGAAAGAGGCCAATTGGGAGGCTGAGAATCAA
                      ____________________________________________________________
consensus             GAGGGAGGCCAGATTAGAGAAGGCGAAGCGAAAGAGGCCAATTGGGAGGCTGAGAATCAA
 
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JMSF024L22-           ATGGTTGGCCTTGTTCTCAGCTCCACCACACCCAAAAGATGAACATGAAGCCTGCAGAGA
                      ____________________________________________________________
consensus             ATGGTTGGCCTTGTTCTCAGCTCCACCACACCCAAAAGATGAACATGAAGCCTGCAGAGA
 
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JMSF024L22-           GGAAGAACTGGGAAACCATGCCACCATGGTTATAGCTTCTGCTGCAACAAATGCTGCAGA
                      ____________________________________________________________
consensus             GGAAGAACTGGGAAACCATGCCACCATGGTTATAGCTTCTGCTGCAACAAATGCTGCAGA
 
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JMSF024L22-           TTCTGTGCCTTTCGTGCCCGGGGGGGAGCCTTGCTATGTTTCTCAGCCTGCCCATCACCA
                      ____________________________________________________________
consensus             TTCTGTGCCTTTCGTGCCCGGGGGGGAGCCTTGCTATGTTTCTCAGCCTGCCCATCACCA
 
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JMSF024L22-           TAAAGAAGAGATTTCAGAACTGTCAGAAAATCCTCACCTCCATGCTCAAAAACACTGTTG
                      ____________________________________________________________
consensus             TAAAGAAGAGATTTCAGAACTGTCAGAAAATCCTCACCTCCATGCTCAAAAACACTGTTG
 
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JMSF024L22-           TAACTATGATATAGAGATTCAGACCCTTGCTTCCATCAAAATTCAGACAGCTTTTCGCGG
                      ____________________________________________________________
consensus             TAACTATGATATAGAGATTCAGACCCTTGCTTCCATCAAAATTCAGACAGCTTTTCGCGG
 
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JMSF024L22-           TTATCTTGCAAGAAAAGCGTTGCGAGCATTGAAAGGACTAGTGAGGCTTCAAGCAATCAT
JMFF009H23-                  GCAAGAAAAGCGTTGCGAGCATTGAAAGGACTAGTGAGGCTTCAAGCAATCAT
                      ____________________________________________________________
consensus             TTATCTTGCAAGAAAAGCGTTGCGAGCATTGAAAGGACTAGTGAGGCTTCAAGCAATCAT
 
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JMSF024L22-           TCGGGGCCATGCTGTTCGTCGCCNAACTATTGCCACGCTTAAGCGCCTGCAGTCCATTGT
JMFF009H23-           TCGGGGCCATGCTGTTCGTCGCCAAACTATTGCCACGCTTAAGCGCCTGCAGTCCATTGT
                      ____________________________________________________________
consensus             TCGGGGCCATGCTGTTCGTCGCCAAACTATTGCCACGCTTAAGCGCCTGCAGTCCATTGT
 
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JMSF024L22-           AAA                                                         
JMFF009H23-           AAACATCCAGTCAGAGGTCTGTGCCCAGAGGTGCAACTTAGTGAACAACACAACAGAGTT
                      ____________________________________________________________
consensus             AAACATCCAGTCAGAGGTCTGTGCCCAGAGGTGCAACTTAGTGAACAACACAACAGAGTT
 
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JMFF009H23-           TCAAGAAAATCAGTACCAGGACCTAAGAGAGAGAGATATAAAGATAGATTTGAACAGCCA
rJMSF024L22+                                                                   CCA
                      ____________________________________________________________
consensus             TCAAGAAAATCAGTACCAGGACCTAAGAGAGAGAGATATAAAGATAGATTTGAACAGCCA
 
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JMFF009H23-           GAAAAGGTGGGATAATCGAGTTCTGTCAAAGGCGGAAGCAAATGCTATGTTCTTAACCAA
rJMSF024L22+          GAAAAGGTGGGATAATCGAGTTCTGTCAAAGGCGGAAGCAAATGCTATGTTCTTAACCAA
                      ____________________________________________________________
consensus             GAAAAGGTGGGATAATCGAGTTCTGTCAAAGGCGGAAGCAAATGCTATGTTCTTAACCAA
 
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JMFF009H23-           GAGGGATGCTGCAATCCGGAGAGAACGCATAAGGGAATACTGGTTAAGTCATAGGAGGTC
rJMSF024L22+          GAGGGATGCTGCAATCCGGAGAGAACGCATAAGGGAATACTGGTTAAGTCATAGGAGGTC
rJMFF009H23+            GGGATGCTGCAATCCGGAGAGAACGCATAAGGGAATACTGGTTAAGTCATAGGAGGTC
                      ____________________________________________________________
consensus             GAGGGATGCTGCAATCCGGAGAGAACGCATAAGGGAATACTGGTTAAGTCATAGGAGGTC
 
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JMFF009H23-           TGCAGAGTCAGAACAGACNAGTGCACATA                               
rJMSF024L22+          TGCAGAGTCAGAACAGACAAGTGCACATACAAATCAAAGGTATTGGCTACAACAATGGGT
rJMFF009H23+          TGCAGAGTCAGAACAGACAAGTGCACATACAAATCAAAGGTATTGGCTACAACAATGGGT
                      ____________________________________________________________
consensus             TGCAGAGTCAGAACAGACAAGTGCACATACAAATCAAAGGTATTGGCTACAACAATGGGT
 
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rJMSF024L22+          AGATGCCCAACTAGCCAAAAGAGAAGATCTCGAAAACCTGGGAACAGTTTTCTCTGCAAG
rJMFF009H23+          AGATGCCCAACTAGCCAAAAGAGAAGATCTCGAAAACCTGGGAACAGTTTTCTCTGCAAG
                      ____________________________________________________________
consensus             AGATGCCCAACTAGCCAAAAGAGAAGATCTCGAAAACCTGGGAACAGTTTTCTCTGCAAG
 
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rJMSF024L22+          TGCAAGAATGAAAGACAGGTTTGATCAAAGAGAAGCAAAGCCAAATATGCTGAAACAATA
rJMFF009H23+          TGCAAGAATGAAAGACAGGTTTGATCAAAGAGAAGCAAAGCCAAATATGCTGAAACAATA
                      ____________________________________________________________
consensus             TGCAAGAATGAAAGACAGGTTTGATCAAAGAGAAGCAAAGCCAAATATGCTGAAACAATA
 
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rJMSF024L22+          CAAGACAGAAAGTTTGATGTCTCCAATTCGGGCGCCAAGAAGATCGTTTAACAACTCTAT
rJMFF009H23+          CAAGACAGAAAGTTTGATGTCTCCAATTCGGGCGCCAAGAAGATCGTTTAACAACTCTAT
                      ____________________________________________________________
consensus             CAAGACAGAAAGTTTGATGTCTCCAATTCGGGCGCCAAGAAGATCGTTTAACAACTCTAT
 
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rJMSF024L22+          CGGGGATGACAGCCCTGTGGCATCCCCAGCTGTGCCAACTTACATGGCAGCCACTGAATC
rJMFF009H23+          CGGGGATGACAGCCCTGTGGCATCCCCAGCTGTGCCAACTTACATGGCAGCCACTGAATC
                      ____________________________________________________________
consensus             CGGGGATGACAGCCCTGTGGCATCCCCAGCTGTGCCAACTTACATGGCAGCCACTGAATC
 
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rJMSF024L22+          AGCCAAGGCAAGAGCTAGATCACTGAGCTCCCCAAGGCTAAGGCCAACGAAGTTCGACGC
rJMFF009H23+          AGCCAAGGCAAGAGCTAGATCACTGAGCTCCCCAAGGCTAAGGCCAACGAAGTTCGACGC
                      ____________________________________________________________
consensus             AGCCAAGGCAAGAGCTAGATCACTGAGCTCCCCAAGGCTAAGGCCAACGAAGTTCGACGC
 
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rJMSF024L22+          CTATTCCGAGATTAATTCCCCATACAAGTATAGGCTCTCTCCTATCTCCTCTATTAACAG
rJMFF009H23+          CTATTCCGAGATTAATTCCCCATACAAGTATAGGCTCTCTCCTATCTCCTCTATTAACAG
                      ____________________________________________________________
consensus             CTATTCCGAGATTAATTCCCCATACAAGTATAGGCTCTCTCCTATCTCCTCTATTAACAG
 
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rJMSF024L22+          TGAGGTCACTATAACCAGCAGGGTTCTACATCCTACAAGCCTGTCACAAAGATCACCATG
rJMFF009H23+          TGAGGTCACTATAACCAGCAGGGTTCTACATCCTACAAGCCTGTCACAAAGATCACCATG
                      ____________________________________________________________
consensus             TGAGGTCACTATAACCAGCAGGGTTCTACATCCTACAAGCCTGTCACAAAGATCACCATG
 
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rJMSF024L22+          CCTGAAGAGTGCACCTGGTCCTGTGAGATCAAGCAGAAGCCTAAAGAACATTAGCTTGGA
rJMFF009H23+          CCTGAAGAGTGCACCTGGTCCTGTGAGATCAAGCAGAAGCCTAAAGAACATTAGCTTGGA
                      ____________________________________________________________
consensus             CCTGAAGAGTGCACCTGGTCCTGTGAGATCAAGCAGAAGCCTAAAGAACATTAGCTTGGA
 
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rJMSF024L22+          GCAAGATTTGTGATGCCCAAATTGGGAACCCTAATAGTGCCCACCAGATGATTAACCAGA
rJMFF009H23+          GCAAGATTTGTGATGCCCAAATTGGGAACCCTAATAGTGCCCACCAGATGATTAACCAGA
                      ____________________________________________________________
consensus             GCAAGATTTGTGATGCCCAAATTGGGAACCCTAATAGTGCCCACCAGATGATTAACCAGA
 
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rJMSF024L22+          CATGATAACATTTGTAACATTTGGATGGTCTGCT                          
rJMFF009H23+          CATGATAACATTTGTAACATTTGGATGGTCTGCTTACATATTTCAGTTCATAATAAAAAC
                      ____________________________________________________________
consensus             CATGATAACATTTGTAACATTTGGATGGTCTGCTTACATATTTCAGTTCATAATAAAAAC