Contig 006800:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009F06Sequence560006800 (2)ref|XP_009781846.1|4e-10PREDICTED: protein EARLY FLOWERING 4-like [Nicotiana sylvestris]757006800 (2)ref|XP_011084910.1|7e-31PREDICTED: protein EARLY FLOWERING 4 [Sesamum indicum]

Alignment

This contig is upended


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JMFF009F06-                                                                TGGGGGC
                      ____________________________________________________________
consensus                                                                  TGGGGGC
 
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JMFF009F06-           TATCACCCTCCACAATCTGTCATCTCTTCTGAGCTGCACACAAATAATATCTGTCTGCCT
                      ____________________________________________________________
consensus             TATCACCCTCCACAATCTGTCATCTCTTCTGAGCTGCACACAAATAATATCTGTCTGCCT
 
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JMFF009F06-           CCATAGTCCATATATTTCAATCTCTGAATTAGAGAGAGCACACTCGCGACGATTGCTGTG
                      ____________________________________________________________
consensus             CCATAGTCCATATATTTCAATCTCTGAATTAGAGAGAGCACACTCGCGACGATTGCTGTG
 
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JMFF009F06-           CAGATGGTGGAGGGTTCGTTGATGGCGCACTGTTGATCGAGTTCTTTTTGAACGGCAACC
                      ____________________________________________________________
consensus             CAGATGGTGGAGGGTTCGTTGATGGCGCACTGTTGATCGAGTTCTTTTTGAACGGCAACC
 
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JMFF009F06-           ACCGGACCGCTCTTCCGCCGCCGCCGCTGCAGCAGCCGGAGGAGGAGCAGAATCTAAAGG
rJMFF009F06+                                 CCGCTGCAGCAGCCGGAGGAGGAGCAGAATCTAAAGG
                      ____________________________________________________________
consensus             ACCGGACCGCTCTTCCGCCGCCGCCGCTGCAGCAGCCGGAGGAGGAGCAGAATCTAAAGG
 
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JMFF009F06-           ACTGACATGGAGGACAACGTTTCCACCGTCAACAACCGTTCCCCGCGTCAGGCCTTGACC
rJMFF009F06+          ACTGACATGGAGGACAACGTTTCCACCGTCAACAACCGTTCCCCGCGTCAGGCCTTGACC
                      ____________________________________________________________
consensus             ACTGACATGGAGGACAACGTTTCCACCGTCAACAACCGTTCCCCGCGTCAGGCCTTGACC
 
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JMFF009F06-           ACAACTGACTCCGTTACCACTACAAACACCGCCAACAAGCGCCGCCACCGCGGAGCATTC
rJMFF009F06+          ACAACTGACTCCGTTACCACTACAAACACCGCCAACAAGCGCCGCCACCGCGGAGCATTC
                      ____________________________________________________________
consensus             ACAACTGACTCCGTTACCACTACAAACACCGCCAACAAGCGCCGCCACCGCGGAGCATTC
 
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JMFF009F06-           TCGGTTGCGGCGAGGGAGGAGGCGTTCGCTGGAGGAGAAACAAACGGCGGCGGAGAGGAT
rJMFF009F06+          TCGGTTGCGGCGAGGGAGGAGGCGTTCGCTGGAGGAGAAACAAACGGCGGCGGAGAGGAT
                      ____________________________________________________________
consensus             TCGGTTGCGGCGAGGGAGGAGGCGTTCGCTGGAGGAGAAACAAACGGCGGCGGAGAGGAT
 
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JMFF009F06-           CAGAGCGAAGATTGCTTCGAAGGAGGCGACTCGGAAGTCTGGAACGCGTTCACGAGCAAC
rJMFF009F06+          CAGAGCGAAGATTGCTTCGAAGGAGGCGACTCGGAAGTCTGGAACGCGTTCACGAGCAAC
                      ____________________________________________________________
consensus             CAGAGCGAAGATTGCTTCGAAGGAGGCGACTCGGAAGTCTGGAACGCGTTCACGAGCAAC
 
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JMFF009F06-           TTCCAGTCGGTGCAGTCGGTGCTGGATCGGAACAGAGTGCTGATTCGGCAGGTTAACTCC
rJMFF009F06+          TTCCAGTCGGTGCAGTCGGTGCTGGATCGGAACAGAGTGCTGATTCGGCAGGTTAACTCC
                      ____________________________________________________________
consensus             TTCCAGTCGGTGCAGTCGGTGCTGGATCGGAACAGAGTGCTGATTCGGCAGGTTAACTCC
 
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JMFF009F06-           AACCATCAATCTA                                               
rJMFF009F06+          AACCATCAATCTAGAGTCCACGAGAGTCTGGTCGAAAACGTGAACCTAATTCAGGAGATC
                      ____________________________________________________________
consensus             AACCATCAATCTAGAGTCCACGAGAGTCTGGTCGAAAACGTGAACCTAATTCAGGAGATC
 
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rJMFF009F06+          AACGGCAACATCTCCAAAGTCGTTGCACTCTACTCTGATCTCTCCACCAATTTTTCCAGC
                      ____________________________________________________________
consensus             AACGGCAACATCTCCAAAGTCGTTGCACTCTACTCTGATCTCTCCACCAATTTTTCCAGC
 
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rJMFF009F06+          GCGTTTAATCAGCGCAAAGCCACCACTCAAGACCAGAGCAACGCCGAGAAAGCCGACAGC
                      ____________________________________________________________
consensus             GCGTTTAATCAGCGCAAAGCCACCACTCAAGACCAGAGCAACGCCGAGAAAGCCGACAGC
 
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rJMFF009F06+          TAAATCATAGTAAATCTTTCTCGGCCCCCTTCTTCTTCCTTTATCAGTATTCAGTAATGT
                      ____________________________________________________________
consensus             TAAATCATAGTAAATCTTTCTCGGCCCCCTTCTTCTTCCTTTATCAGTATTCAGTAATGT
 
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rJMFF009F06+          TTCTTTCATTAGTGTGTGGCTTAGAGGTATTGAAATCAGGATCTTTGGCCAACCTTTCTA
                      ____________________________________________________________
consensus             TTCTTTCATTAGTGTGTGGCTTAGAGGTATTGAAATCAGGATCTTTGGCCAACCTTTCTA
 
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rJMFF009F06+          CTTACTGTTATAGTGTTATGGATCTTTTTCCTTTAGTAGCTAAAAGTAAAACTATGTCAT
                      ____________________________________________________________
consensus             CTTACTGTTATAGTGTTATGGATCTTTTTCCTTTAGTAGCTAAAAGTAAAACTATGTCAT
 
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rJMFF009F06+          GCGTTCAGTAAAAGTTTCTTTCTAATGTATTACTAAAAATAAAATAAAAATGGCACAACA
                      ____________________________________________________________
consensus             GCGTTCAGTAAAAGTTTCTTTCTAATGTATTACTAAAAATAAAATAAAAATGGCACAACA