| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008E08 | Sequence | 541 | 012882 (6) | ref|XP_011072681.1| | 3e-54 | PREDICTED: subtilisin-like protease [Sesamum indicum] | 655 | 006798 (3) | ref|XP_003627424.1| | 6e-50 | Subtilisin-like serine protease [Medicago truncatula] gb|AET01900.1| subtilisin- |
| JMFF017E03 | Sequence | 508 | 012882 (6) | ref|XP_009628999.1| | 5e-58 | PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis] | 635 | 006798 (3) | ref|XP_011072681.1| | 3e-60 | PREDICTED: subtilisin-like protease [Sesamum indicum] |
| JMFF023P16 | Sequence | 490 | 012882 (6) | ref|XP_011072681.1| | 3e-40 | PREDICTED: subtilisin-like protease [Sesamum indicum] | 700 | 006798 (3) | ref|XP_011072681.1| | 7e-65 | PREDICTED: subtilisin-like protease [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF023P16+ TACACCACC
____________________________________________________________
consensus TACACCACC
. : . : . : . : . : . :
rJMFF017E03+ TCATCACCAGAAAATACGCNGATTGCCGCGGCGCCAAACGCGCCGGC
rJMFF023P16+ AAAAACATCCACGTCATCACCAGAAAATACGCCGATTGCCGCGGCGCCAAACGCGCCGGC
____________________________________________________________
consensus AAAAACATCCACGTCATCACCAGAAAATACGCCGATTGCCGCGGCGCCAAACGCGCCGGC
. : . : . : . : . : . :
rJMFF017E03+ CACGTCGGAAACCTCAACTACCCGTCATTCTCCGCCGTTTTCCAACAATACAGCAAGCAC
rJMFF023P16+ CACGTNGGAAACCTCAACTACCCGTCATTCTCCGCCGTTTTCCAACAATACAGCAAGCAC
rJMFF008E08+ GGAAACCTCAACTACCCGTCATTNTCCGCCGTTTTCCAACAATACAGCANGCAC
____________________________________________________________
consensus CACGTCGGAAACCTCAACTACCCGTCATTCTCCGCCGTTTTCCAACAATACAGCAAGCAC
. : . : . : . : . : . :
rJMFF017E03+ AAACTCTCCACCCACTTCATAAGAACAGTCACCAACGTCGGCGACCCAGACTCCGTCTAC
rJMFF023P16+ AAACTCTCCACCCACTTCATAAGAACAGTCACCAACGTCGGCGACCCAGACTCCGTCTAC
rJMFF008E08+ AAACTCTCCACCCACTTCATAAGAACAGTCACCAACGTCGGCGACCCAGACTCCGTCTAC
____________________________________________________________
consensus AAACTCTCCACCCACTTCATAAGAACAGTCACCAACGTCGGCGACCCAGACTCCGTCTAC
. : . : . : . : . : . :
rJMFF017E03+ ACCGTTTCCATCAACACCCCGCCCGGAACAACGGTGACGGTGGAGCCGGCGCGGCTGCCA
rJMFF023P16+ ACCGTTTCCATCAACACCCCGCCCGGAACAACGGTGACGGTGGAGCCGGCGCGGCTGCCA
rJMFF008E08+ ACCGTTTCCATCAACACCCCGCCCGGAACAACGGTGACGGTGGAGCCGGCGCGGCTGCCA
____________________________________________________________
consensus ACCGTTTCCATCAACACCCCGCCCGGAACAACGGTGACGGTGGAGCCGGCGCGGCTGCCA
. : . : . : . : . : . :
rJMFF017E03+ TTCCGACGAGTGGGCCAAAAACTCAACTTTCTCCTCCGGGTACAAACAGAAGAAGTGAAA
rJMFF023P16+ TTCCGACGAGTGGGCCAAAAACTCAACTTTCTCCTCCGGGTACAAACAGAAGAAGTGAAA
rJMFF008E08+ TTCCGACGAGTGGGCCAAAAACTCAACTTTCTCCTCCGGGTACAAACAGAAGAAGTGAAA
____________________________________________________________
consensus TTCCGACGAGTGGGCCAAAAACTCAACTTTCTCCTCCGGGTACAAACAGAAGAAGTGAAA
. : . : . : . : . : . :
rJMFF017E03+ CTATCGCCGGGAAATTCCCGCGTCAGCAGTGGATCAATAACTTGGTCCGACGGAAAACAC
rJMFF023P16+ CTATCGCCGGGAAATTCCCGCGTCAGCAGTGGATCAATAACTTGGTCCGACGGAAAACAC
rJMFF008E08+ CTATCGCCGGGAAATTCCCGCGTCAGCAGTGGATCAATAACTTGGTCCGACGGAAAACAC
____________________________________________________________
consensus CTATCGCCGGGAAATTCCCGCGTCAGCAGTGGATCAATAACTTGGTCCGACGGAAAACAC
. : . : . : . : . : . :
rJMFF017E03+ CAAGTTACTTCCCCAATAGTTGTCACATTGCAACAGCCACTCTAATCGACATTCCCGGGA
rJMFF023P16+ CAAGTTACTTCCCCAATAGTTGTCACATTGCAACAGCCACTCTAATCGACATTCCCGGGA
rJMFF008E08+ CAAGTTACTTCCCCAATAGTTGTCACATTGCAACAGCCACTCTAATCGACATTCCCGGGA
____________________________________________________________
consensus CAAGTTACTTCCCCAATAGTTGTCACATTGCAACAGCCACTCTAATCGACATTCCCGGGA
. : . : . : . : . : . :
rJMFF017E03+ ATAGATCTATTCCATGAAATGGTATTAGTCATCTATTCCACGAACCAAACACGGTTTNAA
rJMFF023P16+ ATAGATCTATTCCATGAAATGGTATTAGTCATCTATTCCACGAACCAAACACGGTTT-AA
rJMFF008E08+ ATAGATCTATTCCATGAAATGGTATTAGTCATCTATTCCACGAACCAAACACGGTTT-AA
____________________________________________________________
consensus ATAGATCTATTCCATGAAATGGTATTAGTCATCTATTCCACGAACCAAACACGGTTT-AA
. : . : . : . : . : . :
rJMFF017E03+ GGTTCATATGTGATATATATATATATAATGTAGTATAAGCCCTGTGGACAGATATCAGAC
rJMFF023P16+ GGTTCATATGTGTTATATATATATATAATGTAGTATAAGCCCTGTGGACAGATATCAGAC
rJMFF008E08+ GGTTCATATGTGTTATATATATATATAATGTAGTATAAGCCCTGTGGACAGATATCAGAC
____________________________________________________________
consensus GGTTCATATGTGTTATATATATATATAATGTAGTATAAGCCCTGTGGACAGATATCAGAC
. : . : . : . : . : . :
rJMFF017E03+ AGTACACTCTACTATCTGATCTGAGTTAGTAACTTTGTATTGGGTTTTCGTTTTGTAACA
rJMFF023P16+ AGTACACTCTACTATCTGATCTGAGTTAGTAACTTTGTATTGGGTTTTCGTTTTGTAACA
rJMFF008E08+ AGTACACTCTACTATCTGATCTGAGTTAGTAACTTTGTATTGGGTTTTCGTTTTGTAACA
____________________________________________________________
consensus AGTACACTCTACTATCTGATCTGAGTTAGTAACTTTGTATTGGGTTTTCGTTTTGTAACA
. : . : . : . : . : . :
rJMFF017E03+ GTTCATAAGCTGAGCTGAGTTTGAGGGATGGATAATCTTTTCTTCTTT
rJMFF023P16+ GTTCATAAGCTGAGCTGAGTTTGAGGGATGGATAATCTTTTCTTCTTTGTTGTAGAATGA
rJMFF008E08+ GTTCATAAGCTGAGCTGAGTTTGAGGGATGGATAATCTTTTCTTCTTTGTTGTAGAATGA
____________________________________________________________
consensus GTTCATAAGCTGAGCTGAGTTTGAGGGATGGATAATCTTTTCTTCTTTGTTGTAGAATGA
. : . : . : . : . : . :
rJMFF023P16+ CAATGGATCTTTCAAGTATCT
rJMFF008E08+ CAATGGATCTTTCAAGTATCTTGTGTAAAAAAAAATGTTGTTTTATGCTGAGACAAAGAT
____________________________________________________________
consensus CAATGGATCTTTCAAGTATCTTGTGTAAAAAAAAATGTTGTTTTATGCTGAGACAAAGAT