Contig 006797:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002F06Sequence586004489 (9)emb|CDP10212.1|5e-40unnamed protein product [Coffea canephora]723006797 (9)ref|XP_004242572.1|2e-70PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF005F07Sequence365004489 (9)emb|CDP10212.1|2e-05unnamed protein product [Coffea canephora]711006797 (9)ref|XP_004242572.1|2e-69PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF008D17Sequence592004489 (9)emb|CDP10212.1|3e-20unnamed protein product [Coffea canephora]774006797 (9)ref|XP_004242572.1|5e-76PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF009J05Sequence592004489 (9)emb|CDP10212.1|3e-20unnamed protein product [Coffea canephora]749006797 (9)ref|XP_004242572.1|2e-71PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF010L01Sequence592004489 (9)emb|CDP10212.1|3e-20unnamed protein product [Coffea canephora]675006797 (9)ref|XP_004242572.1|6e-58PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF018F24Sequence595004489 (9)emb|CDP10212.1|8e-27unnamed protein product [Coffea canephora]790006797 (9)ref|XP_004242572.1|1e-77PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMSF010H07Sequence409004489 (9)emb|CDP10212.1|1e-09unnamed protein product [Coffea canephora]748006797 (9)ref|XP_004242572.1|3e-76PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMSF021L21Sequence698004489 (9)ref|XP_004242572.1|4e-65PREDICTED: protein RTF2 homolog [Solanum lycopersicum]756006797 (9)ref|XP_004242572.1|1e-77PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMSF025L14Sequence667004489 (9)emb|CDP10212.1|9e-41unnamed protein product [Coffea canephora]649006797 (9)ref|XP_009775838.1|2e-51PREDICTED: protein RTF2 homolog [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF021L21+ TCCC
rJMFF018F24+ TATCAGCTATCCC
                      ____________________________________________________________
consensus TATCAGCTATCCC
 
. : . : . : . : . : . :
rJMSF021L21+ GGGTATGGAAGACAGTGGCTTGGGTTTCGTGACAAGGTTTCAATGCCCTATCTC-GGGGT
rJMSF010H07+ ATGGAAGACAGTGGCTTGGGTTTCGTGACAAGGTTTCAATGCCCTATCTC-GGGGT
rJMFF005F07+ GGT
rJMFF018F24+ GGGTATGGAAGACAGTGGCTTGGGTTTCGTGACAAGGTTTCAATGCCNTATCTC-GGGGT
rJMFF009J05+ GTGACAAGGTTTCAATGCCCTATCTCGGGGGT
rJMFF002F06+ GGGT
rJMFF008D17+ ATGGAAGACAGTGGCTTGGGTTTCGTGACAAGGTTTCAATGCCCTATCTC-GGGGT
                      ____________________________________________________________
consensus GGGTATGGAAGACAGTGGCTTGGGTTTCGTGACAAGGTTTCAATGCCCTATCTC-GGGGT
 
. : . : . : . : . : . :
rJMSF021L21+ TAGAGTTTAATGGGAAATATAAGTTCTTTGCACTTAGGCCTTGTGGGCATGTCTTCAGTG
rJMSF010H07+ TAGAGTTTAATGGGAAATATAAGTTCTTTGCACTTAGGCCTTGTGGGCATGTCTTCAGTG
rJMFF005F07+ TAGAGTTTAATGGGAAATATAAGTTCTTTGCACTTAGGCCTTGTGGGCATGTCTTCAGTG
rJMFF018F24+ TAGAGTTTAATGGGAAATATAAGTTCTTTGCACTTAGGCCTTGTGGGCATGTCTTCAGTG
rJMFF009J05+ TAGAGTTTAATGGGAAATATAAGTTCTTTGCACTTAGGCNTTGTGGGCATGTCTTCAGTG
rJMFF002F06+ TAGAGTTTAATGGGAAATATAAGTTCTTTGCACTTAGGCNTTGTGGGCATGTCTTCAGTG
rJMFF010L01+ GGGCATGTCTTCAGTG
rJMSF025L14+ GGGCATGTCTTCAGTG
rJMFF008D17+ TAGAGTTTAATGGGAAATATAAGTTCTTTGCACTTAGGCCTTGTGGGCATGTCTTCAGTG
                      ____________________________________________________________
consensus TAGAGTTTAATGGGAAATATAAGTTCTTTGCACTTAGGCCTTGTGGGCATGTCTTCAGTG
 
. : . : . : . : . : . :
rJMSF021L21+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
rJMSF010H07+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
rJMFF005F07+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
rJMFF018F24+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
rJMFF009J05+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
rJMFF002F06+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
rJMFF010L01+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
rJMSF025L14+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
rJMFF008D17+ CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
                      ____________________________________________________________
consensus CCAAAGCTTTGAAAGAGGTGAAGTCTTCAGCTTGTTTGGTCTGTCACAAGGAGTTCATGG
 
. : . : . : . : . : . :
rJMSF021L21+ AGAACGAGAAGATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
rJMSF010H07+ AGAACGAGAAAATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
rJMFF005F07+ AGAACGAGAAGATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
rJMFF018F24+ AGAACGAGAAGATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
rJMFF009J05+ AGAACGAGAAGATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
rJMFF002F06+ AGAACGAGAAGATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
rJMFF010L01+ AGAACGAGAAGATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
rJMSF025L14+ AGAACGAGAAGATTGTGATAAATGGGAATGANGACGAGGTNGCAGCATTGAAGGAGAGAA
rJMFF008D17+ AGAACGAGAAGATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
                      ____________________________________________________________
consensus AGAACGAGAAGATTGTGATAAATGGGAATGAAGACGAGGTTGCAGCATTGAAGGAGAGAA
 
. : . : . : . : . : . :
rJMSF021L21+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
rJMSF010H07+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
rJMFF005F07+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
rJMFF018F24+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
rJMFF009J05+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
rJMFF002F06+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
rJMFF010L01+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
rJMSF025L14+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
rJMFF008D17+ TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
                      ____________________________________________________________
consensus TGGTGGAGGAAAACGCAAAACTTAAGGATAATAAGAAGTCGAAGAAGGGGAAGAATGGTG
 
. : . : . : . : . : . :
rJMSF021L21+ GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
rJMSF010H07+ GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
rJMFF005F07+ GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
rJMFF018F24+ GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
rJMFF009J05+ GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
rJMFF002F06+ GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
rJMFF010L01+ GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
rJMSF025L14+ GGGANGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
rJMFF008D17+ GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
                      ____________________________________________________________
consensus GGGATGTAGCTGTGAATGGTGAGGGTGTTGAAGTTACCCGCTTGAGTGGGACAAAACATG
 
. : . : . : . : . : . :
rJMSF021L21+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
rJMSF010H07+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
rJMFF005F07+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
rJMFF018F24+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
rJMFF009J05+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
rJMFF002F06+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
rJMFF010L01+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
rJMSF025L14+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGANCTGAATAGGAAAAATAATC
rJMFF008D17+ GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
                      ____________________________________________________________
consensus GGATTGAGGATAAGGTTTTTGCAGAGAAAGGGAAATCAGAACTGAATAGGAAAAATAATC
 
. : . : . : . : . : . :
rJMSF021L21+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
rJMSF010H07+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
rJMFF005F07+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
rJMFF018F24+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
rJMFF009J05+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
rJMFF002F06+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
rJMFF010L01+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
rJMSF025L14+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
rJMFF008D17+ CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
                      ____________________________________________________________
consensus CTAATGGTAAGATCGAAGTGAAGAATGTTACCAATGGTGCAAGTAATGGATCAGGAAAGC
 
. : . : . : . : . : . :
rJMSF021L21+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
rJMSF010H07+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
rJMFF005F07+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
rJMFF018F24+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
rJMFF009J05+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
rJMFF002F06+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
rJMFF010L01+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
rJMSF025L14+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
rJMFF008D17+ GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
                      ____________________________________________________________
consensus GATTTAAGGCGGGTGAGAATGTACCAGCTAATGCTACCAAGGAGGTTTATGCATCCATTT
 
. : . : . : . : . : . :
rJMSF021L21+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
rJMSF010H07+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
rJMFF005F07+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
rJMFF018F24+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
rJMFF009J05+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
rJMFF002F06+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
rJMFF010L01+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
rJMSF025L14+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATNGCCACTTG
rJMFF008D17+ TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
                      ____________________________________________________________
consensus TTACATCATCCAGGAAGTCTGATTTCAAGGAGACGTATTCTTGTCGGTCATTGCCACTTG
 
. : . : . : . : . : . :
rJMSF021L21+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
rJMSF010H07+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
rJMFF005F07+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
rJMFF018F24+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
rJMFF009J05+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
rJMFF002F06+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
rJMFF010L01+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
rJMSF025L14+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
rJMFF008D17+ GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
                      ____________________________________________________________
consensus GAAGAAACTAATGAGTTCTTGGGGTGTATCTCTAAGGTGATCAAGTTGTGTTTCTCATTG
 
. : . : . : . : . : . :
rJMSF021L21+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
rJMSF010H07+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
rJMFF005F07+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
rJMFF018F24+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
rJMFF009J05+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
rJMFF002F06+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
rJMFF010L01+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
rJMSF025L14+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTANTGACAGCCACTTTCCNGTGTAGTGG
rJMFF008D17+ TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
                      ____________________________________________________________
consensus TTCTTTTGTCATACAAGTATGTGTATGCCCCTTATTGACAGCCACTTT-CTGTGTAGTGG
 
. : . : . : . : . : . :
rJMSF021L21+ TTTTTTGCTTTATGTAAGATTATCATTAGTGATT
rJMSF010H07+ TTTTTTGCTTTATGTAAGATTATCATTAG
rJMFF005F07+ TTTTTTGCTTTATGTAAGATTATCATTAGTGATTGTATTTGTATTTTAC
rJMFF018F24+ TTTTTTGCTTTATGTAAGATTATCATTAGTGATTGTATTTGTATTTTACAATGGTTACT
rJMFF009J05+ TTTTTTGCTTTATGTAAGATTATCATTAGTGATTGTATTTGTATTTTACAATGGTTAC
rJMFF002F06+ TTTTTTGCTTTATGTAAGATTATCATTAGTGATTGTATTTGTATTTTACAATGGTTACT
rJMFF010L01+ TTTTTTGCTTTATGTAAGATTATCATTAGTGATTGTATTTGTATTTTACAATGGTTACT
rJMSF025L14+ TTTTTTGCTCTATGTAAGATTATCATTAGTGAT
rJMFF008D17+ TTTTTTGCTTTATGTAAGATTATCATTAGTGATTGTATTTGTATTTTACAATGGTTACTT
                      ____________________________________________________________
consensus TTTTTTGCTTTATGTAAGATTATCATTAGTGATTGTATTTGTATTTTACAATGGTTACTT