Contig 006796:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007P20Sequence589007760 (3)ref|XP_002284394.3|52.8PREDICTED: uncharacterized protein LOC100257501 [Vitis vinifera]799006796 (4)gb|KDO80746.1|1e-107hypothetical protein CISIN_1g014111mg [Citrus sinensis]
JMFF013B17Sequence762006796 (4)ref|XP_009790722.1|245PREDICTED: uncharacterized protein LOC104238136 [Nicotiana sylvestris]
JMSF003B05Sequence261007760 (3)ref|XP_009790722.1|51.6PREDICTED: uncharacterized protein LOC104238136 [Nicotiana sylvestris]749006796 (4)ref|XP_006434130.1|9e-101hypothetical protein CICLE_v10001224mg [Citrus clementina] gb|ESR47370.1| hypoth
JMSF006D09Sequence342016686ref|WP_044703470.1|1e-64succinyl-CoA synthetase subunit alpha, partial [Escherichia coli]471006796 (4)ref|XP_009587912.1|4e-46PREDICTED: uncharacterized protein LOC104085555 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMFF007P20+                                                 GGCATGCTGTATCAGAACTGG
                      ____________________________________________________________
consensus                                                    GGCATGCTGTATCAGAACTGG
 
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rJMSF003B05+                      CAAGCAGAAACATCGTGGAGATCATATTCCAATCAAGCTGGCTGAAGA
rJMFF013B17+                      CAAGCAGAAACATCGTGGAGATCATATTCCAATCAAGCTGGCTGAAGA
rJMFF007P20+          GTCCAGAGGACACAAGCAGAAACATCGTGGAGATCATATTCCAATCAAGCTGGCTGAAGA
                      ____________________________________________________________
consensus             GTCCAGAGGACACAAGCAGAAACATCGTGGAGATCATATTCCAATCAAGCTGGCTGAAGA
 
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rJMSF003B05+          AAGACACCCCAATCTGCAAAATAGACCGAATCCTC-AAAGTCCACAACACT-CCTCGGAC
rJMFF013B17+          AAGACACCCCAATCTGCAAAATAGACCGAATCCTCAAAAGTCCACAACACTCCCTCGGAC
rJMFF007P20+          AAGACACCCCAATCTGCAAAATAGACCGAATCCTC-AAAGTCCACAACACT-CCTCGGAC
                      ____________________________________________________________
consensus             AAGACACCCCAATCTGCAAAATAGACCGAATCCTC-AAAGTCCACAACACT-CCTCGGAC
 
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rJMSF003B05+          CATTTCAAGGTTCGAGGACTACAGGGAAGCCACCAAGGCCAAGGCCAACAAGCTAGCCAA
rJMFF013B17+          CATTTCAAGGTTCGAGGACTACAGGGAAGCCACCAAGGCCAAGGCCAACAAGCTAGCCAA
rJMFF007P20+          CATTTCAAGGTTCGAGGACTACAGGGAAGCCACCAAGGCCAAGGCCAACAAGCTAGCCAA
                      ____________________________________________________________
consensus             CATTTCAAGGTTCGAGGACTACAGGGAAGCCACCAAGGCCAAGGCCAACAAGCTAGCCAA
 
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rJMSF003B05+          GAAGCACCCACGCTGCATCGCCGACGGGAACGAGCTCCTCAGGTTCCATTGCACCACCTT
rJMFF013B17+          GAAGCACCCACGCTGCATCGCCGACGGGAACGAGCTCCTCAGGTTCCATTGCACCACCTT
rJMFF007P20+          GAAGCACCCACGCTGCATCGCCGACGGGAACGAGCTCCTCAGGTTCCATTGCACCACCTT
                      ____________________________________________________________
consensus             GAAGCACCCACGCTGCATCGCCGACGGGAACGAGCTCCTCAGGTTCCATTGCACCACCTT
 
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rJMSF003B05+          CGTCTGTTCTCTCGGCGTAAACGCCTCCTCAAACCTCTGCAACTCAATCCCCAACTGCAA
rJMFF013B17+          CGTCTGTTCTCTCGGCGTAAACGCCTCCTCAAACCTCTGCAACTCAATCCCCAACTGCAA
rJMSF006D09+                                                         TCCCCAACTGCAA
rJMFF007P20+          CGTCTGTTCTCTCGGCGTAAACGCCTCCTCAAACCTCTGCAACTCAATCCCCAACTGCAA
                      ____________________________________________________________
consensus             CGTCTGTTCTCTCGGCGTAAACGCCTCCTCAAACCTCTGCAACTCAATCCCCAACTGCAA
 
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rJMSF003B05+          CGTCTGCGCCGTCATCAAGAACGGCTTCAAGGTCGCCGAGGATGTCGCCGGAAAAGGCAT
rJMFF013B17+          CGTCTGCGCCGTCATCAAGAACGGCTTCAAGGTCGCCGAGGATGTCGCCGGAAAAGGCAT
rJMSF006D09+          CGTNTGCGCCGTCATCAAGAACGGCTTCAAGGTCGCCGAGGATGTCGCCGGAAAAGGCAT
rJMFF007P20+          CGTCTGCGCCGTCATCAAGAACGGCTTCAAGGTCGCCGAGGATGTCGCCGGAAAAGGCAT
                      ____________________________________________________________
consensus             CGTCTGCGCCGTCATCAAGAACGGCTTCAAGGTCGCCGAGGATGTCGCCGGAAAAGGCAT
 
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rJMSF003B05+          CCTGACGACGGCGACGAGTGGGAGGGCGCACGATAGCGCGAGGGTGGCGGATGAGAAGAG
rJMFF013B17+          CCTGACGACGGCGACGAGTGGGAGGGCGCACGATAGCGCGAGGGTGGCGGATGAGAAGAG
rJMSF006D09+          CCTGACGACGGCGACGAGTGGGAGGGCGCACGATAGCGCGAGGGTGGCGGATGAGAAGAG
rJMFF007P20+          CCTGACGACGGCGACGAGTGGGAGGGCGCACGATAGCGCGAGGGTGGCGGATGAGAAGAG
                      ____________________________________________________________
consensus             CCTGACGACGGCGACGAGTGGGAGGGCGCACGATAGCGCGAGGGTGGCGGATGAGAAGAG
 
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rJMSF003B05+          GGCGATGTTGGTTTGCCGGGTGATCGCCGGACGGGTGAAGAAGAATATGGAAGGGAGCTT
rJMFF013B17+          GGCGATGTTGGTTTGCCGGGTGATCGCCGGACGGGTGAAGAAGAATATGGAAGGGAGCTT
rJMSF006D09+          GGCGATGTTGGTTTGCCGGGTGATCGCCGGACGGGTGAAGAAGAATATGGAAGGGAGCTT
rJMFF007P20+          GGCGATGTTGGTTTGCCGGGTGATCGCCGGACGGGTGAAGAAGAATATGGAAGGGAGCTT
                      ____________________________________________________________
consensus             GGCGATGTTGGTTTGCCGGGTGATCGCCGGACGGGTGAAGAAGAATATGGAAGGGAGCTT
 
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rJMSF003B05+          GGAGGAGTATGACTCGGTGGCCGGAGCCGCCGGAGTTTATTCCAACTTGGATGAGTTGTA
rJMFF013B17+          GGAGGAGTATGACTCGGTGGCCGGAGCCGCCGGAGTTTATTCCAACTTGGATGAGTTGTA
rJMSF006D09+          GGAGGAGTATGACTCGGTGGCCGGAGCCGCCGGAGTTTATTCCAACTTGGATGAGTTGTA
rJMFF007P20+          GGAGGAGTATGACTCGGTGGCCGGAGCCGCCGGAGTTTATTCCAACTTGGATGAGTTGTA
                      ____________________________________________________________
consensus             GGAGGAGTATGACTCGGTGGCCGGAGCCGCCGGAGTTTATTCCAACTTGGATGAGTTGTA
 
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rJMSF003B05+          CGTGTTTAATCACAGGGCTATATTGCCATGTTTCGTTGTAATCTATAGAGAGTTTTAGAA
rJMFF013B17+          CGTGTTTAATCACAGGGCTATATTGCCCTGTTTCGTTGTAATCTATAGAGAGTTTTAGAA
rJMSF006D09+          CGTGTTTAATCACAGGGCTATATTGCCCTGTTTCGTTGTAATCTATAGAGAGTTTTAGAA
rJMFF007P20+          CGTGTTTAATCACAGGGCTATATTGCCCTGTTTCGTTGTAATCTATAGAGAGTTTTAGAA
                      ____________________________________________________________
consensus             CGTGTTTAATCACAGGGCTATATTGCCCTGTTTCGTTGTAATCTATAGAGAGTTTTAGAA
 
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rJMSF003B05+          TTTAGAGGGCTAAGCTATCTACCTACCTAGTATTTGTTTTGTTTTGTTTTGTTTGTCGGA
rJMFF013B17+          TTTAGAGGGCTAAGCTATCTACCTACCTAGTATTTGTTTTGTTTTGTTTTGTTTGTCGGA
rJMSF006D09+          TTTAGAGGGCTAAGCTATCTACCTACCTAGTATTTGTTTTGTTTTGTTTTGTTTGTCGGA
rJMFF007P20+          TTTAGAGGGCTAAGCTATCTACCTACCTAGTATTTGTTTTGTTTTGTTTTGTTTGTCGGA
                      ____________________________________________________________
consensus             TTTAGAGGGCTAAGCTATCTACCTACCTAGTATTTGTTTTGTTTTGTTTTGTTTGTCGGA
 
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rJMSF003B05+          TAATGTTTAGATGGCAACTGTAAGTTTCATTTTAGTATTAGGTAGGATTTTCCGTTTAAT
rJMFF013B17+          TAATGTTTAGATGGCAACTGTAAGTTTCATTTTAGTATTAGGTAGGATTTTCCGTTTAAT
rJMSF006D09+          TAATGTTTAGATGGCAACTGTAAGTTTCATTTTAGTATTAGGTAGGATTTTCCGTTTAAT
rJMFF007P20+          TAATGTTTAGATGGCAACTGTAAGTTTCATTTTAGTATTAGGTAGGATTTTCCGTTTAAT
                      ____________________________________________________________
consensus             TAATGTTTAGATGGCAACTGTAAGTTTCATTTTAGTATTAGGTAGGATTTTCCGTTTAAT
 
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rJMSF003B05+          TTGTTGCATGCTGCAGGATGCTGACATGCAAGGT                          
rJMFF013B17+          TTGTTGCATGCTGCAGGATGCTGACATGCAAGGTTAAATGAG                  
rJMSF006D09+          TTGTTGCATGCTGCAGGATGCTGACATGCAAGGT                          
rJMFF007P20+          TTGTTGCATGCTGCAGGATGCTGACATGCAAGGTTAAATGAGTGGAAAATGCCAAATAAA
                      ____________________________________________________________
consensus             TTGTTGCATGCTGCAGGATGCTGACATGCAAGGTTAAATGAGTGGAAAATGCCAAATAAA