| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007G03 | Sequence | 583 | 006795 (6) | ref|XP_004250698.1| | 4e-13 | PREDICTED: uncharacterized protein LOC101259907 isoform X2 [Solanum lycopersicu | 731 | 006795 (6) | ref|XP_006281004.1| | 2e-53 | hypothetical protein CARUB_v10027018mg [Capsella rubella] gb|EOA13902.1| hypothe |
| JMFF019J02 | Sequence | 536 | 006795 (6) | ref|XP_004250698.1| | 9e-23 | PREDICTED: uncharacterized protein LOC101259907 isoform X2 [Solanum lycopersicu | 788 | 006795 (6) | ref|XP_004250697.1| | 1e-78 | PREDICTED: uncharacterized protein LOC101259907 isoform X1 [Solanum lycopersicu |
| JMFF030J17 | Sequence | 476 | 006795 (6) | ref|XP_004250698.1| | 5e-10 | PREDICTED: uncharacterized protein LOC101259907 isoform X2 [Solanum lycopersicu | 332 | 006795 (6) | ref|XP_010522985.1| | 104 | PREDICTED: uncharacterized protein LOC104801415 [Tarenaya hassleriana] |
This contig is upended
. : . : . : . : . : . :
JMFF030J17- ACC
____________________________________________________________
consensus ACC
. : . : . : . : . : . :
JMFF030J17- AATAGGAAATGGAAAATTTCCGAAACAAACAGAAAGCCCACCTAACCGTCAGCTTGTAAA
JMFF007G03- ATAGGAAATGGAAAATTTCCGAAACAAACAGAAAGCCCACCTAACCGTCAGCTTGTAAA
____________________________________________________________
consensus AATAGGAAATGGAAAATTTCCGAAACAAACAGAAAGCCCACCTAACCGTCAGCTTGTAAA
. : . : . : . : . : . :
JMFF030J17- GTCAGAGCTCTGAATCCACGTTTACCGCACTCCGATTCTCGGTCTGGTTTCAGAGCAGAG
JMFF007G03- GTCAGAGCTCTGAATCCACGTTTACCGCACTCCGATTCTCGGTCTGGTTTCAGAGCAGAG
JMFF019J02- AGAGCTCTGAATCCACGTTTACCGCACTCCGATTCTCGGTCTGGTTTCAGAGCAGAG
____________________________________________________________
consensus GTCAGAGCTCTGAATCCACGTTTACCGCACTCCGATTCTCGGTCTGGTTTCAGAGCAGAG
. : . : . : . : . : . :
JMFF030J17- AAATCCGTCTGAAATCGATCAGAAAATTCAGTGACAGAATGATCTCACGCTGCTCGAGCT
JMFF007G03- AAATCCGTCTGAAATCGATCAGAAAATTCAGTGACAGAATGATCTCACGCTGCTCGAGCT
JMFF019J02- AAATCCGTCTGAAATCGATCAGAAAATTCAGTGACAGAATGATCTCACGCTGCTCGAGCT
rJMFF019J02+ TCGATCAGAAAATTCAGTGACAGAATGATCTCACGCTGCTCGAGCT
____________________________________________________________
consensus AAATCCGTCTGAAATCGATCAGAAAATTCAGTGACAGAATGATCTCACGCTGCTCGAGCT
. : . : . : . : . : . :
JMFF030J17- GGAAGCTTCCGGTGGCGGAGGCGGGAGGGCCGCCGTTGCGTCTGCGGGCGAGGCAGGAAG
JMFF007G03- GGAAGCTTCCGGTGGCGGAGGCGGGGGGGCCGCCGTTGCGTCTGCGGGCGAGGCAGGAAG
JMFF019J02- GGAAGCTTCCGGTGGCGGAGGCGGGAGGGCCGCCGTTGCGTCTGCGGGCGAGGCAGGAAG
rJMFF019J02+ GGAAGCTTCCGGTGGCGGAGGCGGGAGGGCCGCCGTTGCGTCTGCGGGCGAGGCAGGAAG
____________________________________________________________
consensus GGAAGCTTCCGGTGGCGGAGGCGGGAGGGCCGCCGTTGCGTCTGCGGGCGAGGCAGGAAG
. : . : . : . : . : . :
JMFF030J17- GAGTTCATTTCAGTAGGATTGCTACGAGGAGCTGCCCTGGCCCTGCTCCTAGCAGAGCGT
JMFF007G03- GAGTTCATTTCAGTAGGATTGCTACGAGGAGCTGCCCTGGCCCTGCTCCTAGCAGAGCGT
JMFF019J02- GAGTTCATTTCAGTAGGATTGCTACGAGGAGCTGCCCTGGCCCTGCTCCTAGCAGAGCGT
rJMFF019J02+ GAGTTCATTTCAGTAGGATTGCTACGAGGAGCTGCCCTGGCCCTGCTCCTAGCAGAGCGT
rJMFF007G03+ TAGCAGAGCGT
____________________________________________________________
consensus GAGTTCATTTCAGTAGGATTGCTACGAGGAGCTGCCCTGGCCCTGCTCCTAGCAGAGCGT
. : . : . : . : . : . :
JMFF030J17- TGAAGTTGCGTGT-GGCGGCGGTGGACCGCAGCAGT-AACGGCGGCGCCGGTGAGAGCGC
JMFF007G03- TGAAGTTGCGTGTGGGCGGCGGTGGACCGCAGCAAGTAACGGCGGCGCCGGTGAGAGCGC
JMFF019J02- TGAAGTTGCGTGTGGGCGGCGGTGGACCGCAGCCAGTAACGGCGGCGCCGGTGAGAGCGC
rJMFF019J02+ TGAAGTTGCGTGT-GGCGGCGGTGGACCGCAGCAGT-AACGGCGGCGCCGGTGAGAGCGC
rJMFF007G03+ TGAAGTTGCGTGT-GGCGGCGGTGGACCGCAGCAGTAAACGGCGGCGCCGGNGAGAGCGC
____________________________________________________________
consensus TGAAGTTGCGTGT-GGCGGCGGTGGACCGCAGCAGT-AACGGCGGCGCCGGTGAGAGCGC
. : . : . : . : . : . :
JMFF030J17- CGCCAGTAAG-AAGGCTGCTGCGTCCTCATCGTCGGTTCCTAATTCGAATTACATGGTGC
JMFF007G03- CGCCAGTAAN-AAGGCTGCTGCGTCCTCATCGTCGGTTCCTAATTCNAATTACATGGTGC
JMFF019J02- CGCCAGTAAG-AAGGCTGCTGCGTCCTCATCGTCGGTTCCTAATTCNAATTACATGGTGC
rJMFF019J02+ CGCCAGTAAG-AAGGCTGCTGCGTCCTCATCGTCGGTTCCTAATTCGAATTACATGGTGC
rJMFF007G03+ CGCCAGTAAGAAAGGCTGCTGCGTCCTCATCGTCGGTTCCTAATTCGAATTACATGGTGC
____________________________________________________________
consensus CGCCAGTAAG-AAGGCTGCTGCGTCCTCATCGTCGGTTCCTAATTCGAATTACATGGTGC
. : . : . : . : . : . :
JMFF030J17- CGCTGGACAAGTCGTCTTCCTGCATTACTCGCCCCCTGGCCGAGATCCTCCGTGAC
JMFF007G03- CGCTGGACAANTCNTCTTCCTGCATTACTCNCCCCCTGGCCGANATCCTCCGTGACCTCA
JMFF019J02- CGCTGGACAAGTCGTCTTCCTGCATTACTCGCCCCCTGGCCGAGATCCTCCGTGACCTCA
rJMFF019J02+ CGCTGGACAAGTCGTCTTCCTGCATTACTCGCCCCCTGGCCGAGATCCTCCGTGACCTCA
rJMFF007G03+ CGCTGGACAAGTCGTCTTCCTGCATTACTCGCCCCCTGGCCGAGATCCTCCGTGACCTCA
____________________________________________________________
consensus CGCTGGACAAGTCGTCTTCCTGCATTACTCGCCCCCTGGCCGAGATCCTCCGTGACCTCA
. : . : . : . : . : . :
JMFF007G03- ACAANANGATCCCCNATAACATCATCAAGGATCACNACNGNGATGATCCTCATGCCATAT
JMFF019J02- ACAANAGGATCCCCGATAACATCATCAAGGATCACNACAGTGATGATCCTCATGCCATAT
rJMFF019J02+ ACAAGAGGATCCCCGATAACATCATCAAGGATCACGACAGTGATGATCCTCATGCCATAT
rJMFF007G03+ ACAAGAGGATCCCCGATAACATCATCAAGGATCACGACAGTGATGATCCTCATGCCATAT
____________________________________________________________
consensus ACAAGAGGATCCCCGATAACATCATCAAGGATCACGACAGTGATGATCCTCATGCCATAT
. : . : . : . : . : . :
JMFF007G03- TCATCCCCTGGTATCACNCCNATCNCATGTTGANCTTCTAC
JMFF019J02- TCATCCCCTGGTATCACNCCNATCNCATGTTGAGCTTCTACNCTCCANGTTGGTGCGGA
rJMFF019J02+ TCATCCCCTGGTATCACGCCAATCGCATGTTGAGCTTCTACGCTCCAGGTTGGTGCGGAG
rJMFF007G03+ TCATCCCCTGGTATCACGCCAATCGCATGTTGAGCTTCTACGCTCCAGGTTGGTGCGGAG
____________________________________________________________
consensus TCATCCCCTGGTATCACGCCAATCGCATGTTGAGCTTCTACGCTCCAGGTTGGTGCGGAG
. : . : . : . : . : . :
rJMFF019J02+ AAATAAGGAATGTTATTTTCTCTGAGAATGGAACTGTGACTGTTGTTTACCGTGTCACTA
rJMFF030J17+ CTGTTGTTTACCGTGTCACTA
rJMFF007G03+ AAATAAGGAATGTTA-TTTCTCTGAGAATGGAACTGTGACTGTTGTTTACCGTGTCACTA
____________________________________________________________
consensus AAATAAGGAATGTTATTTTCTCTGAGAATGGAACTGTGACTGTTGTTTACCGTGTCACTA
. : . : . : . : . : . :
rJMFF019J02+ TACTAGGATCGGATGGAGAGGCATACCGTGAATCAACCGGGACAGTATCATCAGGCGATG
rJMFF030J17+ TACTAGGATCGGATGGAGAGGCATACCGTGAATCAACCGGGACAGTATCATCAGGCGATG
rJMFF007G03+ TACTAGGATCGGATGGAGAGGCATACCGTGAATCAACCGGGACAGTATCATCAGGCGATG
____________________________________________________________
consensus TACTAGGATCGGATGGAGAGGCATACCGTGAATCAACCGGGACAGTATCATCAGGCGATG
. : . : . : . : . : . :
rJMFF019J02+ AGCACATCAAGGATCCGGTCGCTGAAGCTGAGGAGATTGCTTTTTGCCGAGCATGTGCTC
rJMFF030J17+ AGCACATCAAGGATCCGGTCGCTGAAGCTGAGGAGATTGCTTTTTGCCGAGCATGTGCTC
rJMFF007G03+ AGCACATCAAGGATCCGGTCGCTGAAGCTGAGGAGATTGCTTTTTGCCGAGCATGTGCTC
____________________________________________________________
consensus AGCACATCAAGGATCCGGTCGCTGAAGCTGAGGAGATTGCTTTTTGCCGAGCATGTGCTC
. : . : . : . : . : . :
rJMFF019J02+ GGTTTGGACTTGGCTTATATCTTTATCATGACGAGTAGCTGCTACAGAAATGACAATTTT
rJMFF030J17+ GGTTTGGACTTGGCTTATATCTTTATCATGACGAGTAGCTGCTACAGAAATGACAATTTT
rJMFF007G03+ AGTTTGGACTTGGCTTATATCTTTATCATGATGAGTAGCTGCTACAGAAATGACAATTTT
____________________________________________________________
consensus GGTTTGGACTTGGCTTATATCTTTATCATGACGAGTAGCTGCTACAGAAATGACAATTTT
. : . : . : . : . : . :
rJMFF019J02+ GATAAGATGGATGAAGCAGTTTTATCTGCGTTCATAAGATATTTTAGTCTGGTATAAATA
rJMFF030J17+ GATAAGATGGATGAAGCAGTTTTATCTGCGTTCATAAGATATTTTAGTCTGGTATAAATA
rJMFF007G03+ GATAAGATGGATGAAGCAGTTTTATCTGCGTTCATAAGATATTTTAGTCTGGTATAAATA
____________________________________________________________
consensus GATAAGATGGATGAAGCAGTTTTATCTGCGTTCATAAGATATTTTAGTCTGGTATAAATA
. : . : . : . : . : . :
rJMFF019J02+ ACCTTTAAAGCCGTCTGTATCACCA
rJMFF030J17+ ACCTTTAAAGCCGTCTGTATCACCACATTATACTACATATTCCACTATGACTTTTCATGT
rJMFF007G03+ ACCTTTAAAGCCGTCTGTATCACCACATTATACTACATATTCCACTATGACTTTTCATGT
____________________________________________________________
consensus ACCTTTAAAGCCGTCTGTATCACCACATTATACTACATATTCCACTATGACTTTTCATGT
. : . : . : . : . : . :
rJMFF030J17+ GTTCTTGCTAC
rJMFF007G03+ GTTCTTGCTACTGGTTTATGTGCTGGAATTCTACCAGTTTTGCTAATTCTCACTTCCCAT
____________________________________________________________
consensus GTTCTTGCTACTGGTTTATGTGCTGGAATTCTACCAGTTTTGCTAATTCTCACTTCCCAT