Contig 006794:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF006L21-                            GGTTTTTGTTTAATTTTGAATTTTGTTTTATCACAAAATCTGT
rJMFF006L21+                           GGTTTTTGTTTAATTTTGAATTTTGTTTTATCACAAAATCTGT
                      ____________________________________________________________
consensus                              GGTTTTTGTTTAATTTTGAATTTTGTTTTATCACAAAATCTGT
 
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JMSF018F01-                                AGCCACTGCTGTTGAAGTAGCGAAACCTCGTCCACCTCT
JMFF006L21-           TTCTCAGTAAACGAAGAGCGCAGCCACTGCTGTTGAAGTAGCGAAACCTCGTCCACCTCT
rJMSF018F01+                               AGCCACTGCTGTTGAAGTAGCGAAACCTCGTCCACCTCT
rJMFF006L21+          TTCTCAGTAAACGAAGAGCGCAGCCACTGCTGTTGAAGTAGCGAAACCTCGTCCACCTCT
                      ____________________________________________________________
consensus             TTCTCAGTAAACGAAGAGCGCAGCCACTGCTGTTGAAGTAGCGAAACCTCGTCCACCTCT
 
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JMSF018F01-           CACATCTGTCTTTCGCTTCCTCGTTTAACTAAAACCCAGTGGAATTAATGGCGTCCAAGT
JMFF006L21-           CACATCTGTCTTTCGCTTCCTCGTTTAACTAAAACCCAGTGGAATTAATGGCGTCCAAGT
rJMSF018F01+          CACATCTGTCTTTCGCTTCCTCGTTTAACTAAAACCCAGTGGAATTAATGGCGTCCAAGT
rJMFF006L21+          CACATCTGTCTTTCGCTTCCTCGTTTAACTAAAACCCAGTGGAATTAATGGCGTCCAAGT
                      ____________________________________________________________
consensus             CACATCTGTCTTTCGCTTCCTCGTTTAACTAAAACCCAGTGGAATTAATGGCGTCCAAGT
 
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JMSF018F01-           TTCAGCAATTGTCATCTAAGGCATGCCAACTTACGCAGCTTATCACCAAGAATAGTTGTA
JMFF006L21-           TTCAGCAATTGTCATCTAAGGCATGCCAACTTACGCAGCTTATCACCAAGAATAGTTGTA
rJMSF018F01+          TTCAGCAATTGTCATCTAAGGCATGCCAACTTACGCAGCTTATCACCAAGAATAGTTGTA
rJMFF006L21+          TTCAGCAATTGTCATCTAAGGCATGCCAACTTACGCAGCTTATCACCAAGAATAGTTGTA
                      ____________________________________________________________
consensus             TTCAGCAATTGTCATCTAAGGCATGCCAACTTACGCAGCTTATCACCAAGAATAGTTGTA
 
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JMSF018F01-           CCCTCTACAAACAGACACTAGAGCAGAACAAGCAGTATATTGTGGAGCCATCTACTGTGG
JMFF006L21-           CCCTCTACAAACAGACACTAGAGCAGAACAAGCAGTATATTGTGGAGCCATCTACTGTGG
rJMSF018F01+          CCCTCTACAAACAGACACTAGAGCAGAACAAGCAGTATATTGTGGAGCCATCTACTGTGG
rJMFF006L21+          CCCTCTACAAACAGACACTAGAGCAGAACAAGCAGTATATTGTGGAGCCATCTACTGTGG
                      ____________________________________________________________
consensus             CCCTCTACAAACAGACACTAGAGCAGAACAAGCAGTATATTGTGGAGCCATCTACTGTGG
 
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JMSF018F01-           GAAAGTGTGAGGAATTGTCTAAGAAACTATTTTACACCCGTCTCGCCAGTATCCCTGGTC
JMFF006L21-           GAAAGTGTGAGGAATTGTCTAAGAAACTATTTTACACCCGTCTCGCCAGTATCCCTGGTC
rJMSF018F01+          GAAAGTGTGAGGAATTGTCTAAGAAACTATTTTACACCCGTCTCGCCAGTATCCCTGGTC
rJMFF006L21+          GAAAGTGTGAGGAATTGTCTAAGAAACTATTTTACACCCGTCTCGCCAGTATCCCTGGTC
                      ____________________________________________________________
consensus             GAAAGTGTGAGGAATTGTCTAAGAAACTATTTTACACCCGTCTCGCCAGTATCCCTGGTC
 
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JMSF018F01-           GGTACGAGGCATTTTGGAAGGAACTTGACTATGTGA                        
JMFF006L21-           GGTACGAGGCATTTTGGAAGGAACTTGACTATGTGAAGAACTTGTGGAAGATGAGGCCGG
rJMSF018F01+          GGTACGAGGCATTTTGGAAGGAACTTGACTATGTGAAGAACTTGTGGAAGATGAGGCCGG
rJMFF006L21+          GGTACGAGGCATTTTGGAAGGAACTTGACTATGTGAAGAACTTGTGGAAGATGAGGCCGG
                      ____________________________________________________________
consensus             GGTACGAGGCATTTTGGAAGGAACTTGACTATGTGAAGAACTTGTGGAAGATGAGGCCGG
 
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JMFF006L21-           AGTTGAAAGTCGAGGATGCAGGAATTGCGGCTTTATTTGGCATCGAGTGCTTTGCGTGGT
rJMSF018F01+          AGTTGAAAGTCGAGGATGCAGGAATTGCGGCTTTATTTGGCATCGAGTGCTTTGCGTGGT
rJMFF006L21+          AGTTGAAAGTCGAGGATGCAGGAATTGCGGCTTTATTTGGCATCGAGTGCTTTGCGTGGT
                      ____________________________________________________________
consensus             AGTTGAAAGTCGAGGATGCAGGAATTGCGGCTTTATTTGGCATCGAGTGCTTTGCGTGGT
 
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JMFF006L21-           TCTGTGCCGGGGAGATTGTTGGAAGGGGATTTACCTTCACCGGTTACTATGTCTGAAAGT
rJMSF018F01+          TCTGTGCCGGGGAGATT-TTGGAAGGGGATTTACCTTCACCGGTTACTATGTCTGAAAGT
rJMFF006L21+          TCTGTGCCGGGGAGATTGTTGGAAGGGGATTTACCTTCACCGGTTACTATGTCTGAAAGT
                      ____________________________________________________________
consensus             TCTGTGCCGGGGAGATTGTTGGAAGGGGATTTACCTTCACCGGTTACTATGTCTGAAAGT
 
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JMFF006L21-           GACCATTTGAGCCAAAAGTTTTTTTTGACCAAATGTAAATCCAA                
rJMSF018F01+          GACCATTTGAGCCAAAAGTTTTTTTTGACCAAATGTAAATCCAAGAGATGGAAATTAGGA
rJMFF006L21+          GACCATTTGAGCCAAAAGTTTTTTTTGACCAAATGTAAATCCAAGAGATGGAAATTAGGA
                      ____________________________________________________________
consensus             GACCATTTGAGCCAAAAGTTTTTTTTGACCAAATGTAAATCCAAGAGATGGAAATTAGGA
 
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rJMSF018F01+          TGAGAATGACAGAAAGTGGAACTTCAAATTTATTTTTGTTTTTCCCTTGAAAATGTTTCC
rJMFF006L21+          TGAGAATGACAGAAAGTGGAACTTCAAATTTATTTTTGTTTTTCCCTTGAAAATGTTTCC
                      ____________________________________________________________
consensus             TGAGAATGACAGAAAGTGGAACTTCAAATTTATTTTTGTTTTTCCCTTGAAAATGTTTCC
 
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rJMSF018F01+          GGAGCTGAGAAATCAGTAACTAACTTTGATTAATTCAATAATCTGCCTTTCAAGAAAAGA
rJMFF006L21+          GGAGCTGAGAAATCAGTAACTAACTTTGATTAATTCAATAATCTGCCTTTCAAGAAAAGA
                      ____________________________________________________________
consensus             GGAGCTGAGAAATCAGTAACTAACTTTGATTAATTCAATAATCTGCCTTTCAAGAAAAGA
 
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rJMSF018F01+          TATGTATTCGATGAGAATAACTTTGTTGGATCTATTCATTTGAGACGCT           
rJMFF006L21+          TATGTATTCGATGAGAATAACTTTGTTGGATCTATTCATTTGAGACGCTTGCAAATAGTA
                      ____________________________________________________________
consensus             TATGTATTCGATGAGAATAACTTTGTTGGATCTATTCATTTGAGACGCTTGCAAATAGTA