Contig 006788:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J24Sequence261004461 (5)719006788 (3)ref|XP_009602497.1|5e-89PREDICTED: leucine-rich repeat extensin-like protein 6 [Nicotiana tomentosiform
JMSF011P05Sequence223004461 (5)654006788 (3)ref|XP_009795730.1|4e-98PREDICTED: leucine-rich repeat extensin-like protein 4 [Nicotiana sylvestris]
JMSF049K05Sequence223004461 (5)716006788 (3)ref|XP_009602497.1|4e-89PREDICTED: leucine-rich repeat extensin-like protein 6 [Nicotiana tomentosiform

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF011P05+ TCAGAGTTTGGGGAATTCCCCAGCTTCTG
rJMSF049K05+ GTGGGAANTGCNTCAGAGTTTGGGGAATTCCCCAGCTTNTG
                      ____________________________________________________________
consensus GTGGGAANTGCNTCAGAGTTTGGGGAATTCCCCAGCTTCTG
 
. : . : . : . : . : . :
rJMSF011P05+ TCATCAATTTGGCTAACAACAAGTTCTCTGGTAACATTCCCTTCAGTTTAGGCTACATGG
rJMSF049K05+ TCATCAANTTGGCTAACAACAAGTTCTCTGGTAACANTCCCTTCAGNTTAGGCTACATGG
rJMFF005J24+ CATCAATTTGGCTAACAACAAGTTNTNTGGTAACATTCCCTTCAGTTTAGGCTACATGG
                      ____________________________________________________________
consensus TCATCAATTTGGCTAACAACAAGTTCTCTGGTAACATTCCCTTCAGTTTAGGCTACATGG
 
. : . : . : . : . : . :
rJMSF011P05+ GTCCAAGAATCAAGGAGATTTTGTTCCTGAACAACCAGCTAACAGGTTGTATTCCTGAAG
rJMSF049K05+ GTCCAAGAATCAAGGAGATTTTGTTCCTGAACAACCAGCTAACAGGTTGTATTCCTGAAG
rJMFF005J24+ GTCCAAGAATCAAGGAGATTTTGTTCCTGAACAACCAGCTAACAGGTTGTATTCCTGAAG
                      ____________________________________________________________
consensus GTCCAAGAATCAAGGAGATTTTGTTCCTGAACAACCAGCTAACAGGTTGTATTCCTGAAG
 
. : . : . : . : . : . :
rJMSF011P05+ GGGTTGGGATGTGGACAGATTTGGAGGTTCTTGATGTGAGTTCAAATTCCTTGATGGGGC
rJMSF049K05+ GGGTTGGGATGTGGACAGATTTGGAGGTTNNTGANGTGAGTTCAAATTCCNTGATGGGGC
rJMFF005J24+ GGGTTGGGATGTGGACAGATTTGGAGGTTCTTGATGTGAGTTCAAATTCCTTGATGGGGC
                      ____________________________________________________________
consensus GGGTTGGGATGTGGACAGATTTGGAGGTTCTTGATGTGAGTTCAAATTCCTTGATGGGGC
 
. : . : . : . : . : . :
rJMSF011P05+ ATTTGCCAGACTCAATATCCNGTNTGAGTGGGATTGAAGTCCTGAACTTGGCTAACAATA
rJMSF049K05+ ATTTGCCAGACTCAATATCCTGTNTGAGTGGGATTGAAGTCCTGAACTTGGCTAACNATA
rJMFF005J24+ ATTTGCCAGACTCAATATCCTGTNTGAGTGGGATTGAAGTCCTGAACTTGGCTAACAATA
                      ____________________________________________________________
consensus ATTTGCCAGACTCAATATCCTGTNTGAGTGGGATTGAAGTCCTGAACTTGGCTAACAATA
 
. : . : . : . : . : . :
rJMSF011P05+ AGCTCTNTGGGGAGTTGCCAGACATTGTTTGTTCACTGAAGAGGCTGTTGAATTTGACCA
rJMSF049K05+ AGCTCTNTGGGGAGTTGCCAGACANTGTTTGTTCACTGAAGAGGCTGTTGAATTTGACCA
rJMFF005J24+ AGCTNTTTGGGGAGTTGCCAGACATTGTTTGTTCACTGAAGAGGCTGTTGAATTTGACCA
                      ____________________________________________________________
consensus AGCTCTTTGGGGAGTTGCCAGACATTGTTTGTTCACTGAAGAGGCTGTTGAATTTGACCA
 
. : . : . : . : . : . :
rJMSF011P05+ TAACTTACAACTTNTTCTNTGGGGTGAGCCAAGACTGTGACAGGCTTCCAACTAGGAATG
rJMSF049K05+ TAACTTACAACTTTTTNTNTGGGGTGAGCCAAGACTGTGACAGGCTTCCAACTAGGAANG
rJMFF005J24+ TAACTTACAACTTTTTNTTTGGGGTGAGCCAAGACTGTGACAGGNTTCCAACTAGGAATG
                      ____________________________________________________________
consensus TAACTTACAACTTTTTCTTTGGGGTGAGCCAAGACTGTGACAGGCTTCCAACTAGGAATG
 
. : . : . : . : . : . :
rJMSF011P05+ TGGGGTTTGATTTCTCTNTGAATTGCATTCCNGGAAGGGAAATGCAGAGGTCACAACCAG
rJMSF049K05+ TGGGGTTTGATTTCTNTTTGAATTGCNTTCCAGGAAGGGAAATGCNGAGGTCACAACCAG
rJMFF005J24+ TGGGGTTTGATTTNTNTTTGAATTGCATTCCAGGAAGGGAAATGCAGAGGTCACAACCAG
                      ____________________________________________________________
consensus TGGGGTTTGATTTCTCTTTGAATTGCATTCCAGGAAGGGAAATGCAGAGGTCACAACCAG
 
. : . : . : . : . : . :
rJMSF011P05+ AGTGTTNTGATATCCCNGGAAGCAGTTTGAGTTGCCTTAGAATCCCTTCACCCAAACCTA
rJMSF049K05+ AGTGTTTTGATATCCCNGGAAGCAGTTTGAGTTGCCTTAGAATCCCTTCACCCAAACCTA
rJMFF005J24+ AGTGTTTTGATATCCCAGGAAGCAGTTTGAGTTGCCTTAGAATCCCTTCACCCAAACCTN
                      ____________________________________________________________
consensus AGTGTTTTGATATCCCAGGAAGCAGTTTGAGTTGCCTTAGAATCCCTTCACCCAAACCTA
 
. : . : . : . : . : . :
rJMSF011P05+ CTGTGTGTGGGGCNTTGATTGGGGGTGAAGGTGAAAAGACCNGTGCGAGTCCTCCTCATT
rJMSF049K05+ CTGTGTGTGGGGCATTGATTGGGGGTGAAGGNGAAAAGACCAGTGCGAGTCCTCCTCATT
rJMFF005J24+ CTGTGTGTGGGGCATTGATTGGGGGTGAAGGTGAAAAGACCAGTGNGAGTCCTCCTCATT
                      ____________________________________________________________
consensus CTGTGTGTGGGGCATTGATTGGGGGTGAAGGTGAAAAGACCAGTGCGAGTCCTCCTCATT
 
. : . : . : . : . : . :
rJMSF011P05+ GATTTGGTTAGGTGCNCCNTTATGATTGCCNCTTTTTTTTTTGTTTTTTGGTTGGAAAAC
rJMSF049K05+ GATTTGGTTAGGTGCNCCNTTATGATTGCCNCTTTTTTTTTTGTTTTTTGGTTGGAAAAC
rJMFF005J24+ GATTTGGTTAGGTGCACCATTATGATTGCCACTTTTTTTTTTGTTTTTTGGTTGGAAAAC
                      ____________________________________________________________
consensus GATTTGGTTAGGTGCACCATTATGATTGCCACTTTTTTTTTTGTTTTTTGGTTGGAAAAC
 
. : . : . : . : . : . :
rJMSF011P05+ AACTTAGTATTGGTTGTCTCATT
rJMSF049K05+ AACTTAGTATTGGTTGTCTCATTAACTGGGATTGCGATAATGTATGACTTGTTAATTTGT
rJMFF005J24+ AACTTAGTATTGGTTGTCTCATTAACTGGGATTGCGATAATGTATGACTTGTTAATTTGT
                      ____________________________________________________________
consensus AACTTAGTATTGGTTGTCTCATTAACTGGGATTGCGATAATGTATGACTTGTTAATTTGT
 
. : . : . : . : . : . :
rJMSF049K05+ CCTCCCTTTTCTATT
rJMFF005J24+ CCTCCCTTTTCTATTTATTTTGAAGTGTACAAGATAATGACTATATATATATTTAGATCT
                      ____________________________________________________________
consensus CCTCCCTTTTCTATTTATTTTGAAGTGTACAAGATAATGACTATATATATATTTAGATCT