| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005I02 | Sequence | 446 | 008751 (5) | ref|XP_009346323.1| | 7e-40 | PREDICTED: dnaJ homolog subfamily B member 4-like [Pyrus x bretschneideri] ref|X | 469 | 006787 (6) | ref|XP_004302588.1| | 9e-18 | PREDICTED: dnaJ homolog subfamily B member 13 [Fragaria vesca subsp. vesca] |
| JMFF006N05 | Sequence | 528 | 008751 (5) | ref|XP_004246761.1| | 5e-63 | PREDICTED: dnaJ homolog subfamily B member 13 [Solanum lycopersicum] | 808 | 006787 (6) | ref|XP_009598062.1| | 2e-96 | PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis] |
| JMFF010O03 | Sequence | 573 | 008751 (5) | ref|XP_006365599.1| | 1e-59 | PREDICTED: dnaJ homolog subfamily B member 4-like [Solanum tuberosum] | 770 | 006787 (6) | ref|XP_009598062.1| | 7e-104 | PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis] |
| JMFF027C21 | Sequence | 531 | 008751 (5) | ref|XP_006365599.1| | 5e-63 | PREDICTED: dnaJ homolog subfamily B member 4-like [Solanum tuberosum] | 756 | 006787 (6) | ref|XP_009598062.1| | 3e-96 | PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis] |
| JMFF039C23 | Sequence | 430 | 006787 (6) | ref|XP_004302588.1| | 1e-11 | PREDICTED: dnaJ homolog subfamily B member 13 [Fragaria vesca subsp. vesca] | |||||
| JMSF017O01 | Sequence | 395 | 008751 (5) | gb|KDP24444.1| | 4e-44 | hypothetical protein JCGZ_25008 [Jatropha curcas] | 500 | 006787 (6) | ref|XP_009598062.1| | 4e-24 | PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF006N05+ GATGA
____________________________________________________________
consensus GATGA
. : . : . : . : . : . :
rJMFF006N05+ TATGTTTGCTCAATTTAGGAATGTCGCAGGTGAGAATGCCGGCGGCAATGTGCTAAGAAA
rJMFF027C21+ TGTGCCAAGAAA
rJMFF010O03+ GAATGCCGGCGGCAATGTGCCAAGAAA
____________________________________________________________
consensus TATGTTTGCTCAATTTAGGAATGTCGCAGGTGAGAATGCCGGCGGCAATGTGCCAAGAAA
. : . : . : . : . : . :
rJMFF006N05+ GGCACCTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
rJMFF027C21+ GGCACNTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
rJMFF010O03+ GGCACCTGCCATNGAGCGGACACTT-CCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
____________________________________________________________
consensus GGCACCTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
. : . : . : . : . : . :
rJMFF006N05+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
rJMFF027C21+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
rJMFF010O03+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
____________________________________________________________
consensus CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
. : . : . : . : . : . :
rJMFF006N05+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
rJMFF027C21+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
rJMFF010O03+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
____________________________________________________________
consensus AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
. : . : . : . : . : . :
rJMFF006N05+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
rJMFF027C21+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
rJMFF010O03+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
____________________________________________________________
consensus CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
. : . : . : . : . : . :
rJMFF006N05+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMFF027C21+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMFF010O03+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMSF017O01+ CCCAAAAGCTTT
____________________________________________________________
consensus AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
. : . : . : . : . : . :
rJMFF006N05+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
rJMFF027C21+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAGCAACCCTCGATGGCCGAAATC
rJMFF010O03+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
rJMSF017O01+ CATTTNTNGNGGCTTTGNCTGGCTATNCTGCNCAAGTAACAACCCTCGATGGCCGAAATN
____________________________________________________________
consensus CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
. : . : . : . : . : . :
rJMFF006N05+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMFF027C21+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMFF010O03+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMSF017O01+ TCNCTATNCCCNTCNCTTCAATCATAAGTCCNACATNCGAAGNAGTTGTTAAAGGNGAGG
rJMFF039C23+ CTTCAATCATAAGTNCAACATNCGAAGAAGTTGTTAAAGGTGAGG
rJMFF005I02+ CTTCAATCATAAGTCCAACATNCGAAGAAGTTGTTAAAGGNGAGG
____________________________________________________________
consensus TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
. : . : . : . : . : . :
rJMFF006N05+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMFF027C21+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMFF010O03+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMSF017O01+ GGNTGCCTATCCCGNAGGAGCCCNGCAAAAGGGGGAACCTNCGNATAAAGTTCAACNTTA
rJMFF039C23+ GGANGCCTATNCCGAAGGAGCCCAGCAAAAGGGGGNACCTCCGAATAAANTTNAACATTA
rJMFF005I02+ GGATGCCTATNCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTNAACATTA
____________________________________________________________
consensus GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
. : . : . : . : . : . :
rJMFF006N05+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMFF027C21+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMFF010O03+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMSF017O01+ AGTTNCCCNGCAAGNTTACATTTGAGCAGAAAGCCGGGNTTNAGAAACNGTTAACCTGNT
rJMFF039C23+ AGTTNCCCAGCAAGNTTNCATTTGAGCAGAAANCCGGGATTAAGAAACAGTTAACATGAT
rJMFF005I02+ AGTTCCCCAGCAAGNTTACATTTGAGCAGAAANCCGGGATTAAGAAACAGTTAACATGAT
____________________________________________________________
consensus AGTTCCCCAGCAAGCTTACATTTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
. : . : . : . : . : . :
rJMFF006N05+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMFF027C21+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMFF010O03+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMSF017O01+ GNGAAGNTCAATGCTNGGCAACNGAGAGAGCCTTNTATTTATTAAAAGCTCGCGNCNGAT
rJMFF039C23+ GAGAAGATCAATGNTAGGCAACAGAGAGAGCNTTTTATTTATTAAAAGCTCGNGACAGAT
rJMFF005I02+ GAGAAGATCAATGNTAGGCAACAGAGAGAGCNTTTTATTTATTAAAAGCTCGNGACAGAT
____________________________________________________________
consensus GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
. : . : . : . : . : . :
rJMFF006N05+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMFF027C21+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMFF010O03+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMSF017O01+ TTCNCTCATNTTCTTGCTTGGTNTTTCCCNGCAAAGTAAATTTTAATTCNAGAGNTGCTG
rJMFF039C23+ TTCACTCATTTTTTTGNTTGGTNTTTCCCTGCAAANTAAATTTTAATTCAAGAGTTGNTG
rJMFF005I02+ TTCNCTCATTTTNTTGNTTGGTNTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGNTG
____________________________________________________________
consensus TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
. : . : . : . : . : . :
rJMFF006N05+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMFF027C21+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMFF010O03+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMSF017O01+ AATTTGNGNATTTGTGNGATTTGTNTGGTAGTAGGNGTATCNTAATTTTTATGNTAATTT
rJMFF039C23+ AANTTGNGTATTTGTGAGANTTGTTTGGTAGTAGGAGTATCATAATTTTTATGGTAANTT
rJMFF005I02+ AANTTGNGTATTTGTGAGANTTGTTTGGTAGTAGGAGTATCATAATTTTTATGGTAATTT
____________________________________________________________
consensus AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
. : . : . : . : . : . :
rJMFF006N05+ GCCTACGAAATTATAGAGCAACA
rJMFF027C21+ GCCTACGAAATTATAGAGCAACAT
rJMFF010O03+ GCCTACGAAATTATAGAGCAACAT
rJMSF017O01+ GCCTACGAAATTATAGNGCAACATCCNTGATTGNTGCCAAAA
rJMFF039C23+ GCCTNCGAAATTATAGAGCAACATCCNTGATTGCTGCCAAAANCTTCCCNGNGCTNTTGT
rJMFF005I02+ GCCTNCGAAATTATAGAGCAACATCCTTGATTGNTGCCAAAANCTTCCCNGNGCTNTTGT
____________________________________________________________
consensus GCCTACGAAATTATAGAGCAACATCCTTGATTGCTGCCAAAANCTTCCCNGNGCTNTTGT
. : . : . : . : . : . :
rJMFF039C23+ TTTTATACT
rJMFF005I02+ TTTTATACTNTTANTTGNAACNGNGAATTGCCNTTAAAAAAAAAAAATCTATAAGGAAAA
____________________________________________________________
consensus TTTTATACTNTTANTTGNAACNGNGAATTGCCNTTAAAAAAAAAAAATCTATAAGGAAAA