| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005D17 | Sequence | 490 | 010145 (8) | ref|XP_004239183.1| | 7e-23 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub | 720 | 006783 (5) | ref|XP_009606472.1| | 2e-37 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMFF038D07 | Sequence | 517 | 010145 (8) | ref|XP_004239183.1| | 4e-70 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub | 621 | 006783 (5) | ref|XP_009606472.1| | 4e-33 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMSF025N23 | Sequence | 571 | 010145 (8) | ref|XP_009780359.1| | 9e-101 | PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana sylvestr | 781 | 006783 (5) | ref|XP_009606472.1| | 3e-49 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMSF041D06 | Sequence | 753 | 010145 (8) | ref|XP_009780359.1| | 7e-123 | PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana sylvestr | 666 | 006783 (5) | ref|XP_009606472.1| | 1e-37 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMSF048I05 | Sequence | 635 | 010145 (8) | ref|XP_009780359.1| | 2e-99 | PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana sylvestr | 699 | 006783 (5) | ref|XP_009606472.1| | 2e-37 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
This contig is upended
. : . : . : . : . : . :
rJMSF025N23+ GGCGAAATAAGCCCGTGCCATTNTGCAGATGGCTCGAA
____________________________________________________________
consensus GGCGAAATAAGCCCGTGCCATTNTGCAGATGGCTCGAA
. : . : . : . : . : . :
rJMSF025N23+ CNTGTCACAGAAAAAGAAAGCGGTTTCGGGAAACAGCGCTGCCAGACGCCTAAAGTTTCT
____________________________________________________________
consensus CNTGTCACAGAAAAAGAAAGCGGTTTCGGGAAACAGCGCTGCCAGACGCCTAAAGTTTCT
. : . : . : . : . : . :
rJMSF041D06+ TCTGCAGTGGCCGAAGAAAAAAGACTCGACCGTTGACACCAACTCCGTTGAATCTCTCGC
rJMFF038D07+ TCTCGC
rJMSF025N23+ TCTGCAGTGGCCGAAGAAAAAAGACTCGACCGTTGACACCAACTCCGTTGAATCTCTCGC
rJMSF048I05+ TCTGCAGTGGCCGAAGAAAAAAGACTCGACCGTTGACACCAACTCCGTTGAATCTCTCGC
rJMFF005D17+ TCTGCAGTGGCCGAAGAAAAAAGACTCGACCGTTGACACCAACTCCGTTGAATCTCTCGC
____________________________________________________________
consensus TCTGCAGTGGCCGAAGAAAAAAGACTCGACCGTTGACACCAACTCCGTTGAATCTCTCGC
. : . : . : . : . : . :
rJMSF041D06+ GCCGTACTCTTCAAGCTCGGGGGAGAAGCCGGTCCCGCTGCGACACAAATTCTCGAGAGG
rJMFF038D07+ GCCGTACTCTTCAAGCTCGGGGGAGAAGCCGGTCCCGCTGCGACACAAATTCTCGAGAGG
rJMSF025N23+ GCCGTACTCTTCAAGCTCGGGGGAGAAGCCGGTCCCGCTGCGACACAAATTCTCGAGAGG
rJMSF048I05+ GCCGTACTCTTCAAGCTCGGGGGAGAAGCCGGTCCCGCTGCGACACAAATTCTCGAGAGG
rJMFF005D17+ GCCGTACTCTTCAAGCTCGGGGGAGAAGCCGGTCCCGCTGCGACACAAATTCTCGAGAGG
____________________________________________________________
consensus GCCGTACTCTTCAAGCTCGGGGGAGAAGCCGGTCCCGCTGCGACACAAATTCTCGAGAGG
. : . : . : . : . : . :
rJMSF041D06+ TTCCTCTCTCCCAAACAGCAAAAGAGTTCTCTCGGTCTGCCAGAGCCTCCCGAGCCCATC
rJMFF038D07+ TTCCTCTCTCCCAAACAGCAAAAGAGTTCTCTCGGTCTGCCAGAGCCTCCCGAGCCCATC
rJMSF025N23+ TTCCTCTCTCCCAAACAGCAAAAGAGTTCTCTCGGTCTGCCAGAGCCTCCCGAGCCCATC
rJMSF048I05+ TTCCTCTCTCCCAAACAGCAAAAGAGTTCTCTCGGTCTGCCAGAGCCTCCCGAGCCCATC
rJMFF005D17+ TTCCTCTCTCCCAAACAGCAAAAGAGTTCTCTCGGTCTGCCAGAGCCTCCCGAGCCCATC
____________________________________________________________
consensus TTCCTCTCTCCCAAACAGCAAAAGAGTTCTCTCGGTCTGCCAGAGCCTCCCGAGCCCATC
. : . : . : . : . : . :
rJMSF041D06+ CACCAAGAAGAAGTTCGCTGCCGGGCTAAGACAAGGCGTCATTCAAATAACGCCACAATC
rJMFF038D07+ CACCAAGAAGAAGTTCGCTGCCGGGCTAAGACAAGGCGTCATTCAAATAACGCCACAATC
rJMSF025N23+ CACCAAGAAGAAGTTCGCTGCCGGGCTAAGACAAGGCGTCATTCAAATAACGCCACAATC
rJMSF048I05+ CACCAAGAAGAAGTTCGCTGCCGGGCTAAGACAAGGCGTCATTCAAATAACGCCACAATC
rJMFF005D17+ CACCAAGAAGAAGTTCGCTGCCGGGCTAAGACAAGGCGTCATTCAAATAACGCCACAATC
____________________________________________________________
consensus CACCAAGAAGAAGTTCGCTGCCGGGCTAAGACAAGGCGTCATTCAAATAACGCCACAATC
. : . : . : . : . : . :
rJMSF041D06+ ATCTCTAGGATCACCCCCGACTGCCCCGAGCTCTTTCTCGGGATCACCGTGGGCATCTCC
rJMFF038D07+ ATCTCTAGGATCACCCCCGACTGCCCCGAGCTCTTTCTCGGGATCACCGTGGGCATCTCC
rJMSF025N23+ ATCTCTAGGATCACCCCCGACTGCCCCGAGCTCTTTCTCGGGATCACCGTGGGCATCTCC
rJMSF048I05+ ATCTCTAGGATCACCCCCGACTGCCCCGAGCTCTTTCTCGGGATCACCGTGGGCATCTCC
rJMFF005D17+ ATCTCTAGGATCACCCCCGACTGCCCCGAGCTCTTTCTCGGGATCACCGTGGGCATCTCC
____________________________________________________________
consensus ATCTCTAGGATCACCCCCGACTGCCCCGAGCTCTTTCTCGGGATCACCGTGGGCATCTCC
. : . : . : . : . : . :
rJMSF041D06+ AAACTCCGCCGTTCAAGACAAGAGCTCCAACCTCGCAAATGCCAGCAGCACAGGCGCCTC
rJMFF038D07+ AAACTCCGCCGTTCAAGACAAGAGCTCCAACCTCGCAAATGCCAGCAGCACAGGCGCCTC
rJMSF025N23+ AAACTCCGCCGTTCAAGACAAGAGCTCCAACCTCGCAAATGCCAGCAGCACAGGCGCCTC
rJMSF048I05+ AAACTCCGCCGTTCAAGACAAGAGCTCCAACCTCGCAAATGCCAGCAGCACAGGCGCCTC
rJMFF005D17+ AAACTCCGCCGTTCAAGACAAGAGCTCCAACCTCGCAAATGCCAGCAGCACAGGCGCCTC
____________________________________________________________
consensus AAACTCCGCCGTTCAAGACAAGAGCTCCAACCTCGCAAATGCCAGCAGCACAGGCGCCTC
. : . : . : . : . : . :
rJMSF041D06+ GAGCTCCAGCGATTTGCGGGGCAAACAGAAGTCGAGACTCGGGCAGAAACGTGACTCGTT
rJMFF038D07+ GAGCTCCAGCGATTTGCGGGGCAAACAGAAGTCGAGACTCGGGCAGAAACGTGACTCGTT
rJMSF025N23+ GAGCTCCAGCGATTTGCGGGGCAAACAGAAGTCGAGACTCGGGCAGAAACGTGACTCGTT
rJMSF048I05+ GAGCTCCAGCGATTTGCGGGGCAAACAGAAGTCGAGACTCGGGCAGAAACGTGACTCGTT
rJMFF005D17+ GAGCTCCAGCGATTTGCGGGGCAAACAGAAGTCGAGACTCGGGCAGAAACGTGACTCGTT
____________________________________________________________
consensus GAGCTCCAGCGATTTGCGGGGCAAACAGAAGTCGAGACTCGGGCAGAAACGTGACTCGTT
. : . : . : . : . : . :
rJMSF041D06+ CAACATGAAGGTGATGAACCAGTTCTTCTGCTTCGGTACTGAAGGCCTCGCGGTGGATAA
rJMFF038D07+ CAACATGAAGGTGATGAACCAGTTCTTCTGCTTCGGTACTGAAGGCCTCGCGGTGGATAA
rJMSF025N23+ CAACATGAAGGTGATGAACCAGTTCTTCTGCTTCGGTACTGAAGGCCTCGCGGTGGATAA
rJMSF048I05+ CAACATGAAGGTGATGAACCAGTTCTTCTGCTTCGGTACTGAAGGCCTCGCGGTGGATAA
rJMFF005D17+ CAACATGAAGGTGATGAACCAGTTCTTCTGCTTCGGTACTGAAGGCCTCGCGGTGGATAA
____________________________________________________________
consensus CAACATGAAGGTGATGAACCAGTTCTTCTGCTTCGGTACTGAAGGCCTCGCGGTGGATAA
. : . : . : . : . : . :
rJMSF041D06+ CCCGGTGAGATTCAAACCGCAAGATCAGTGCTACAAACATGCAGTTGCAACATGAGTTTA
rJMFF038D07+ CCCGGTGAGATTCAAACCGCAAGATCAGTGCTACAAACATGCAGTTGCAACATGAGTTTA
rJMSF025N23+ CCCGGTGAGATTCAAACCGCAAGATCAGTGCTACAAACATGCAGTTGCAACATGAGTTTA
rJMSF048I05+ CCCGGTGAGATTCAAACCGCAAGATCAGTGCTACAAACATGCAGTTGCAACATGAGTTTA
rJMFF005D17+ CCCGGTGAGATTCAAACCGCAAGATCAGTGCTACAAACATGCAGTTGCAACATGAGTTTA
____________________________________________________________
consensus CCCGGTGAGATTCAAACCGCAAGATCAGTGCTACAAACATGCAGTTGCAACATGAGTTTA
. : . : . : . : . : . :
rJMSF041D06+ TCAAGAGCATTTGACTTACTACACACTGCTGCAATGAAATCAAATGTATATATAACTAGT
rJMFF038D07+ TCAAGAGCATTTGACTTACTACACACTGCTGCAATGAAATCAAATGTATATATAACTAGT
rJMSF025N23+ TCAAGAGCATTTGACTTACTACACACTGCTGCAATGAAATCAAATGTATATATAACTAGT
rJMSF048I05+ TCAAGAGCATTTGACTTACTACACACTGCTGCAATGAAATCAAATGTATATATAACTAGT
rJMFF005D17+ TCAAGAGCATTTGACTTACTACACACTGCTGCAATGAAATCAAATGTATATATAACTAGT
____________________________________________________________
consensus TCAAGAGCATTTGACTTACTACACACTGCTGCAATGAAATCAAATGTATATATAACTAGT
. : . : . : . : . : . :
rJMSF041D06+ TGTTTTCTATGTTGTCTTTTCACCTTAACTGTAATAAAAAGCTGTACTTGGAG
rJMFF038D07+ TGTTTTCTATGTTGTCTTTTCACCTTAACTGTAATAAAAAGCTGTACTTGGAGCTTGCAG
rJMSF025N23+ TGTTTTCTATGTTGTCTTTTCACCTTAACTGTAATAAAAAGCTGTACTTGGAGCTTGCAG
rJMSF048I05+ TGTTTTCTATGTTGTCTTTTCACCTTAACTGTAATAAAAAGCTGTACTTGGAGCTTGCAG
rJMFF005D17+ TGTTTTCTATGTTGTCTTTTCACCTTAACTGTAATAAAAAGCTGTACTTGGAGCTTGCAG
____________________________________________________________
consensus TGTTTTCTATGTTGTCTTTTCACCTTAACTGTAATAAAAAGCTGTACTTGGAGCTTGCAG
. : . : . : . : . : . :
rJMFF038D07+ TTTTTGGACATGTTT
rJMSF025N23+ TTTTTGGACATGTTTTTGAACTA
rJMSF048I05+ TTTTTGGACATGTTTTTGAACTATTGGTTAAATTCAAAT
rJMFF005D17+ TTTTTGGACATGTTTTTGAACTATTGGTTAAATTCAAATGTTAGTAACTGGGAAACCCAT
____________________________________________________________
consensus TTTTTGGACATGTTTTTGAACTATTGGTTAAATTCAAATGTTAGTAACTGGGAAACCCAT