| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP020G02 | Sequence | 341 | 006782 (3) | ref|XP_009630243.1| | 2e-14 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Ni | |||||
| JMFF005C15 | Sequence | 505 | 007650 (3) | ref|XP_009796569.1| | 5e-82 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso | 780 | 006782 (3) | ref|XP_009796563.1| | 5e-58 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso |
| JMSF023A02 | Sequence | 587 | 007650 (3) | ref|XP_010653158.1| | 2e-25 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Vi | 746 | 006782 (3) | ref|XP_009796563.1| | 9e-58 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso |
This contig is upended
. : . : . : . : . : . :
rJMSF023A02+ CATGAAGGCAACCAAAATGCTGAAGCAACCCCAAGTGGCAGCTCTGAGCAATG
rJMFF005C15+ TCCATTGCATGAAGGCANCCAAAATGCTGAAGCAACCCCAAGTGGCAGCTCTGAGCAATG
____________________________________________________________
consensus TCCATTGCATGAAGGCAACCAAAATGCTGAAGCAACCCCAAGTGGCAGCTCTGAGCAATG
. : . : . : . : . : . :
rJMSF023A02+ GAAAGCATTTGAAAATTCCAGTGATTGCTTAGCATCACTGACTGCTCAAAGTAGCGACCA
rJMFF005C15+ GAAAGCATTTGAAAATTCCAGTGATTGCTTAGCATCACTGACTGCTCAAAGTAGCGACCA
____________________________________________________________
consensus GAAAGCATTTGAAAATTCCAGTGATTGCTTAGCATCACTGACTGCTCAAAGTAGCGACCA
. : . : . : . : . : . :
rJMSF023A02+ ACAAGTTTTTACAGACCATCATCCTGTTACTGATCAATATACGGGATTAAGAGGATTAGA
rJMFF005C15+ ACAAGTTTTTACAGACCATCATCCTGTTACTGATCAATATACGGGATTAAGAGGATTAGA
____________________________________________________________
consensus ACAAGTTTTTACAGACCATCATCCTGTTACTGATCAATATACGGGATTAAGAGGATTAGA
. : . : . : . : . : . :
rJMSF023A02+ GAATTTTGCTAATGATGAAATTCAAACAGCTGCAGTGGGAGGTGGCCATCAAATTTCTAG
rJMFF005C15+ GAATTTTGCTAATGATGAAATTCAAACAGCTGCAGTGGGAGGTGGCCATCAAATTTCTAG
____________________________________________________________
consensus GAATTTTGCTAATGATGAAATTCAAACAGCTGCAGTGGGAGGTGGCCATCAAATTTCTAG
. : . : . : . : . : . :
rJMSF023A02+ CATATCATCATATGTGGGAGAACATGAACTTGAAAATAACAAATCTACCAATCCATTTGA
rJMFF005C15+ CATATCATCATATGTGGGAGAACATGAACTTGAAAATAACAAATCTACCAATCCATTTGA
____________________________________________________________
consensus CATATCATCATATGTGGGAGAACATGAACTTGAAAATAACAAATCTACCAATCCATTTGA
. : . : . : . : . : . :
rJMSF023A02+ CCTCCCGTATGAATCTGATATGGAAACCAACAATATGCCTCATTTCTGGGACATGAGCTC
rJMFF005C15+ CCTCCCGTATGAATCTGATATGGAAACCAACAATATGCCTCATTTCTGGGACATGAGCTC
____________________________________________________________
consensus CCTCCCGTATGAATCTGATATGGAAACCAACAATATGCCTCATTTCTGGGACATGAGCTC
. : . : . : . : . : . :
JMCP020G02- AGAGTTGCCAACTTCCTTTGTTGGTGATGTGAGCGG
rJMSF023A02+ GTTACAAGCTGCATTGCCAAATGGAGAGTTGCCAACTTCCTTTGTTGGTGATGTGAGCGG
rJMFF005C15+ GTTACAAGCTGCATTGCCAAATGGAGAGTTGCCAACTTCCTTTGTTGGTGATGTGAGCGG
____________________________________________________________
consensus GTTACAAGCTGCATTGCCAAATGGAGAGTTGCCAACTTCCTTTGTTGGTGATGTGAGCGG
. : . : . : . : . : . :
JMCP020G02- GCCTTGGTTTTCACAGGATTCAGTTGCATCTTATGTTCCTGCTGGATCAGAAGCCACCTT
rJMSF023A02+ GCCTTGGTTTTCACAGGATTCAGTTGCATCTTATGTTCCTGCTGGATCAGAAGCCACCTT
rJMFF005C15+ GCCTTGGTTTTCACAGGATTCAGTTGCATCTTATGTTCCTGCTGGATCAGAAGCCACCTT
____________________________________________________________
consensus GCCTTGGTTTTCACAGGATTCAGTTGCATCTTATGTTCCTGCTGGATCAGAAGCCACCTT
. : . : . : . : . : . :
JMCP020G02- GGGATTCATTTCAGCACAACCTACAGGCAACCCTATATCGAAAGTTCCAACACAAGGGCC
rJMSF023A02+ GGGATTCATTTCAGCACAACCTACAGGCAACCCTATATCGAAAGTTCCAACACAAGGGCC
rJMFF005C15+ GGGATTCATTTCAGCACAACCTACAGGCAACCCTATATCGAAAGTTCCAACACAAGGGCC
____________________________________________________________
consensus GGGATTCATTTCAGCACAACCTACAGGCAACCCTATATCGAAAGTTCCAACACAAGGGCC
. : . : . : . : . : . :
JMCP020G02- TGTTGCTCCAGTTGGTGGAAATCCTTTCGCATGAAGATTTTCTCTGCCACCGTTAGATTT
rJMSF023A02+ TGTTGCTCCAGTTGGTGGAAATCCTTTCGCATGAAGATTTTCTCTGCCACCGTTAGATTT
rJMFF005C15+ TGTTGCTCCAGTTGGTGGAAATCCTTTCGCATGAAGATTTTCTCTGCCACCGTTAGATTT
____________________________________________________________
consensus TGTTGCTCCAGTTGGTGGAAATCCTTTCGCATGAAGATTTTCTCTGCCACCGTTAGATTT
. : . : . : . : . : . :
JMCP020G02- TTATTTTGTACTATCAGAATTGGGGATAGGTTTCTATTTCTCAAGTATGGGATTTTCAGT
rJMSF023A02+ TTATTTTGTACTATCAGAATTGGGGATAGGTTTCTATTTCTCAAGTATGGGATTTTCAGT
rJMFF005C15+ TTATTTTGTACTATCAGAATTGGGGATAGGTTTCTATTTCTCAAGTATGGGATTTTCAGT
____________________________________________________________
consensus TTATTTTGTACTATCAGAATTGGGGATAGGTTTCTATTTCTCAAGTATGGGATTTTCAGT
. : . : . : . : . : . :
JMCP020G02- TTGTATTATTTTTGTGAAATAAGACGCTGTCTAGATATTTTATCTCATATATCTGTGTTG
rJMSF023A02+ TTGTATTATTTTTGTGAAATAAGACGCTGTCTAGATATTTTATCTCATATATCTGTGTTG
rJMFF005C15+ TTGTATTATTTTTGTGAAATAAGACGCTGTCTAGATATTTTATCTCATATATCTGTGTTG
____________________________________________________________
consensus TTGTATTATTTTTGTGAAATAAGACGCTGTCTAGATATTTTATCTCATATATCTGTGTTG
. : . : . : . : . : . :
rJMSF023A02+ CATTCTTGTACTGTTTTATCAAGAATTGAGATA
rJMFF005C15+ CATTCTTGTACTGTTTTATCAAGAATTGAGATACTGTGTTGTACAACACTTATCCAAATG
____________________________________________________________
consensus CATTCTTGTACTGTTTTATCAAGAATTGAGATACTGTGTTGTACAACACTTATCCAAATG