Contig 006774:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003A05Sequence615006774 (7)gb|KDP26237.1|1e-53hypothetical protein JCGZ_22483 [Jatropha curcas]
JMSF032G23Sequence692006774 (7)ref|XP_009781355.1|3e-71PREDICTED: uncharacterized protein LOC104230289 isoform X2 [Nicotiana sylvestri673006774 (7)ref|XP_009616303.1|3e-96PREDICTED: uncharacterized protein LOC104108868 isoform X2 [Nicotiana tomentosi
JMSF039E02Sequence619006774 (7)ref|XP_009781355.1|2e-54PREDICTED: uncharacterized protein LOC104230289 isoform X2 [Nicotiana sylvestri919006774 (7)ref|XP_009616303.1|3e-128PREDICTED: uncharacterized protein LOC104108868 isoform X2 [Nicotiana tomentosi
JMSF051M22Sequence652006774 (7)ref|XP_009781355.1|2e-82PREDICTED: uncharacterized protein LOC104230289 isoform X2 [Nicotiana sylvestri710006774 (7)ref|XP_010063661.1|268PREDICTED: uncharacterized protein LOC104450690 [Eucalyptus grandis] gb|KCW70898

Alignment

This contig is upended


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JMSF039E02-                                                GTTCTTATGGCGACTTCACAGTC
JMSF032G23-                                       GAGATTTTTGTTCTTATGGCGACTTCACAGTC
                      ____________________________________________________________
consensus                                         GAGATTTTTGTTCTTATGGCGACTTCACAGTC
 
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JMSF039E02-           TCTTTCATCCTCCATGGAAGCAATATCGAGCTCCGGTTTCATTCCGAGTTTTTCAGAAAG
JMSF032G23-           TCTTTCATCCTCCATGGAAGCAATATCGAGCTCCGGTTTCATTCCGAGGTTTTCAGAAAG
JMSF051M22-                                                            TTTTCAGAAAG
                      ____________________________________________________________
consensus             TCTTTCATCCTCCATGGAAGCAATATCGAGCTCCGGTTTCATTCCGAGTTTTTCAGAAAG
 
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JMSF039E02-           GCCTTGTGCTGTTCAATCTGTCAAAATGACTGCTGACTGGCTCGGCAGCTGGGGGAATCT
JMSF032G23-           GCCTTGTGCTGTTCAATCTGTCAAAATGACTGCTGACTGGCTCGGCAGCTGGGGGAATCT
JMSF051M22-           GCCTTGTGCTGTTCAATCTGTCAAAATGACTGCTGACTGGCTCGGCAGCTGGGGGAATCT
                      ____________________________________________________________
consensus             GCCTTGTGCTGTTCAATCTGTCAAAATGACTGCTGACTGGCTCGGCAGCTGGGGGAATCT
 
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JMSF039E02-           GAAATCCAGTTTAAGCGTGGCACATGGTATCTCCTCTTCCGTCGGCGGCTCTCGAATTGC
JMSF032G23-           GAAATCCAGTTTAAGCGTGGCACATGGTATCTCCTCTTCCGTCGGCGGCTCTCGAATTGC
JMSF051M22-           GAAATCCAGTTTAAGCGTGGCACATGGTATCTCCTCTTCCGTCGGCGGCTCTCGAATTGC
                      ____________________________________________________________
consensus             GAAATCCAGTTTAAGCGTGGCACATGGTATCTCCTCTTCCGTCGGCGGCTCTCGAATTGC
 
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JMSF039E02-           GGCGCTTCCACGCGAAGAATCGTCTGGTGGAGACGCCAACGAGGAAGAGCAAAATCGTCG
JMSF032G23-           GGCGCTTCCACGCGAAGAATCGTCTGGTGGAGACGCCAACGAGGAAGAGCAAAATCGTCG
JMSF051M22-           GGCGCTTCCACGCGAAGAATCGTCTGGTGGAGACGCCAACGAGGAAGAGCAAAATCGTCG
                      ____________________________________________________________
consensus             GGCGCTTCCACGCGAAGAATCGTCTGGTGGAGACGCCAACGAGGAAGAGCAAAATCGTCG
 
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JMSF039E02-           GCTCAATGACGAAAATGGATTTGGTTTGGCTTCTGAAGGAGCTGTTTCCTGGTCTCAGGG
JMSF032G23-           GCTCAATGACGAAAATGGATTTGGTTTGGCTTCTGAAGGAGCTGTTTCCTGGTCTCAGGG
JMSF051M22-           GCTCAATGACGAAAATGGATTTGGTTTGGCTTCTGAAGGAGCTGTTTCCTGGTCTCAGGG
                      ____________________________________________________________
consensus             GCTCAATGACGAAAATGGATTTGGTTTGGCTTCTGAAGGAGCTGTTTCCTGGTCTCAGGG
 
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JMSF039E02-           TGATTCTGATGGGAAAACAGAAACTTACAAATACAGAATATCGAAAATGGTTACGCCCCT
JMSF032G23-           TGATTCTGATGGGAAAACAGAAACTTACAAATACAGAATATCGAAAATGGTTACGCCCCT
JMSF051M22-           TGATTCTGATGGGAAAACAGAAACTTACAAATACAGAATATCGAAAATGGTTACGCCCCT
                      ____________________________________________________________
consensus             TGATTCTGATGGGAAAACAGAAACTTACAAATACAGAATATCGAAAATGGTTACGCCCCT
 
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JMSF039E02-           TGAAGTATCACATGGAAGCACGGTAGGGGGAGGTACAAGGGCTGGGCTCTTCAGGACACC
JMSF032G23-           TGAAGTATCACATGGAAGCACGGTAGGGGGAGGTACAAGGGCTGGGCTCTTCAGGACACC
JMSF051M22-           TGAAGTATCACATGGAAGCACGGTAGGGGGAGGTACAAGGGCTGGGCTCTTCAGGACACC
                      ____________________________________________________________
consensus             TGAAGTATCACATGGAAGCACGGTAGGGGGAGGTACAAGGGCTGGGCTCTTCAGGACACC
 
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JMSF039E02-           GATATCAGGGGGCGTGCAAAGCGCCACTTCAGCCCATGGTTTACCAAAACCTGCATTAGC
JMSF032G23-           GATATCAGGGGGCGTGCAAAGCGCCACTTCAGCCCATGGTTTACCAAAACCTGCATTAGC
JMSF051M22-           TATATCAGGGGGCGTGCAAAGCGCCACTTCAGCCCATGGTTTACCAAAACCTGCATTAGC
                      ____________________________________________________________
consensus             GATATCAGGGGGCGTGCAAAGCGCCACTTCAGCCCATGGTTTACCAAAACCTGCATTAGC
 
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JMSF039E02-           AGTTCGCAATCTAATGGAGCAGGCTAGGTTTGCCCATCTATGCACTGTGATGTCCCAGAT
JMSF032G23-           AGTTCGCAATCTAATGGAGCAGGCTAGGTTTGCCCATCTATGCACTGTGATGTCCCAGAT
JMSF051M22-           AGTTCGCAATCTAATGGAGCAGGCTAGGTTTGCCCATCTATGCACTGTGATGTCCCAGAT
                      ____________________________________________________________
consensus             AGTTCGCAATCTAATGGAGCAGGCTAGGTTTGCCCATCTATGCACTGTGATGTCCCAGAT
 
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JMSF039E02-           GCATCATCGCCGAGGGGGTTATCCATTTGGTTCCCTTGTAGATTTTGC            
JMSF032G23-           GCATCATCGCCGAGGGGGTTATCCATTTGGTTCCCTTGTAGATTTTGCACCAGATGCCAT
JMSF051M22-           GCATCATCGCCGAGGGGGTTATCCATTTGGTTCCCTTGTAGATTTTGCACCAGATGCCAT
rJMSF039E02+                                         TCCCTTGTAGATTTTGCACCAGATGCCNT
                      ____________________________________________________________
consensus             GCATCATCGCCGAGGGGGTTATCCATTTGGTTCCCTTGTAGATTTTGCACCAGATGCCAT
 
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JMSF032G23-           -GGGGCATCCAATATTTTCATTCTCGCCATTAGCTATTCACACTAGGAATTTGTTAGCTG
JMSF051M22-           -GGGGCATCCAATATTTTCATTCTCGCCATTAGCTATTCACACTAGGAATTTGTTAGCTG
rJMSF039E02+          NGGGGCATCCAATATTTTCATTCTCGCCATTAGCT-TTCACACTAGGAATTTGTTAGCTG
                      ____________________________________________________________
consensus             -GGGGCATCCAATATTTTCATTCTCGCCATTAGCTATTCACACTAGGAATTTGTTAGCTG
 
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JMSF032G23-           A                                                           
JMSF051M22-           ACCCAAGATGTTCGATGGTTGTGCAGATTCCTGGATGG                      
rJMSF039E02+          ACCCAAGATGTTCGATGGTTGTGCAGATTCCTGGATGGAGTGGCTTATCAAATGCAAGGG
                      ____________________________________________________________
consensus             ACCCAAGATGTTCGATGGTTGTGCAGATTCCTGGATGGAGTGGCTTATCAAATGCAAGGG
 
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rJMSF051M22+                                                                     C
rJMSF032G23+                              TATCCTCTCCCAGAAGACCAACAGGATTGGGCTCATAANC
rJMSF039E02+          TAACCATATTTGGTGATGTTTATCCTCTCCCAGAAGACCAACAGGATTGGGCTCATAAAC
                      ____________________________________________________________
consensus             TAACCATATTTGGTGATGTTTATCCTCTCCCAGAAGACCAACAGGATTGGGCTCATAAAC
 
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rJMSF051M22+          AGTACATAGCAAAGCATCACCAAGGTCCTTCACAACAGTGGGGAAATTTTTATTACTTCA
rJMSF032G23+          AGTACATAGCAAAGCATCACCAAGGTCCTTCACAACAGTGGGGAAATTTTTATTACTTCA
rJMSF039E02+          AGTACATAGCAAAGCATCACCAAGGTCCTTCACAACAGTGGGGAAATTTTTATTACTTCA
                      ____________________________________________________________
consensus             AGTACATAGCAAAGCATCACCAAGGTCCTTCACAACAGTGGGGAAATTTTTATTACTTCA
 
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rJMSF051M22+          GGATGCAAAAAATAAGTGACATATACTTCATTGGAGGTTTTGGAACAGTTGCTTGGGTTG
rJMSF032G23+          GGATGCAAAAAATAAGTGACATATACTTCATTGGAGGTTTTGGAACAGTTGCTTGGGTTG
rJMSF039E02+          GGATGCAAAAAATAAGTGACATATACTTCATTGGAGGTTTTGGAACAGTTGCTTGGGTTG
rJMFF003A05+                                                       CAGTTGCTTGGGTTG
                      ____________________________________________________________
consensus             GGATGCAAAAAATAAGTGACATATACTTCATTGGAGGTTTTGGAACAGTTGCTTGGGTTG
 
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rJMSF051M22+          ATGTCAAGGAATATGAAACCCTCGAACCTGACAAAATTGCTGTTGATGGGGGTGAACAAA
rJMSF032G23+          ATGTCAAGGAATATGAAACCCTCGAACCTGACAAAATTGCTGTTGATGGGGGTGAACAAA
rJMSF039E02+          ATGTCAAGGAATATGAAACCCTCGAACCTGACAAAATTGCTGTTGATGGGGGTGAACAAA
rJMFF003A05+          ATGTCAAGGAATATGAAACCCTCGAACCTGACAAAATTGCTGTTGATGGGGGTGAACAAA
                      ____________________________________________________________
consensus             ATGTCAAGGAATATGAAACCCTCGAACCTGACAAAATTGCTGTTGATGGGGGTGAACAAA
 
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rJMSF051M22+          ACCTCAAGGAACTGAATGCACTCTTCTCAAAACCCCTAAAAGATCTTCTGTCACAAGAAG
rJMSF032G23+          ACCTCAAGGAACTGAATGCACTCTTCTCAAAACCCCTAAAAGATCTTCTGTCACAAGAAG
rJMSF039E02+          ACCTCAAGGAACTGAATGCACTCTTCTCAAAACCCCTAAAAGATCTTCTGTCACAAGAAG
rJMFF003A05+          ACCTCAAGGAACTGAATGCACTCTTCTCAAAACCCCTAAAAGATCTTCTGTCACAAGAAG
                      ____________________________________________________________
consensus             ACCTCAAGGAACTGAATGCACTCTTCTCAAAACCCCTAAAAGATCTTCTGTCACAAGAAG
 
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rJMSF051M22+          CTGAGGTGGACGATGTCGCTCTGATATCAATAGACAGTAAAGGCACTGACATTCGTGTCC
rJMSF032G23+          CTGAGGTGGACGATGTCGCTCTGATATCAATAGACAGTAAAGGCACTGACATTCGTGTCC
rJMSF039E02+          CTGAGGTGGACGATGTCGCTCTGATATCAATAGACAGTAAAGGCACTGACATTCGTGTCC
rJMFF003A05+          CTGAGGTGGACGATGTCGCTCTGATATCAATAGACAGTAAAGGCANTGACATTCGTGTCC
                      ____________________________________________________________
consensus             CTGAGGTGGACGATGTCGCTCTGATATCAATAGACAGTAAAGGCACTGACATTCGTGTCC
 
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rJMSF051M22+          GCCAAGGTGCACAGTTCAACATTCAGAGGATATCCTTTGAAGAAGGGCATTTGGTTGAAA
rJMSF032G23+          GCCAAGGTGCACAGTTCAACATTCAGAGGATATCCTTTGAAGAAGGGCATTTGGTTGAAA
rJMSF039E02+          GCCAAGGTGCACAGTTCAACATTCAGAGGATATCCTTTGAAGAAGGGCATTTGGTTGAAA
rJMFF003A05+          GCCAAGGTGCACAGTTCAACATTCAGAGGATATCCTTTGAAGAAGGGCATTTGGTTGAAA
                      ____________________________________________________________
consensus             GCCAAGGTGCACAGTTCAACATTCAGAGGATATCCTTTGAAGAAGGGCATTTGGTTGAAA
 
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rJMSF051M22+          CACTAGAAGAAGCCAAATCAGCGCTCCGGAAACTAATAAATAAAGGCAAAGTTCACAATT
rJMSF032G23+          CACTAGAAGAAGCCAAATCAGCGCTCCGGAAACTAATAAATAAAGGCAAAGTTCACAATT
rJMSF039E02+          CACTAGAAGAAGCCAAATCAGCGCTCCGGAAACTAATAAATAAAGGCAAAGTTCACAATT
rJMFF003A05+          CANTAGAAGAAGCCAAATCAGCGCTCCGGAAANTAATAAATAAAGGCAAAGTTCACAATT
                      ____________________________________________________________
consensus             CACTAGAAGAAGCCAAATCAGCGCTCCGGAAACTAATAAATAAAGGCAAAGTTCACAATT
 
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rJMSF051M22+          TGCAGAAATGAAAACTTTCCATGCTCTTTTCTGGATTTGTGGAGGTTGTGAAACTAGGTT
rJMSF032G23+          TGCAGAAATGAAAACTTTCCATGCTCTTTTCTGGATTTGTGGAGGTTGTGAAACTAGGTT
rJMSF039E02+          TGCAGAAATGAAAACTTTCCATGCTCTTTTCTGGATTTGTGGAGGTTGTGAAACTAGGTT
rJMFF003A05+          TGCAGAAATGAAAACTTTCCATGCTCTTTTCTGGATTTGTGGAGGTTGTGAAACTAGGTT
                      ____________________________________________________________
consensus             TGCAGAAATGAAAACTTTCCATGCTCTTTTCTGGATTTGTGGAGGTTGTGAAACTAGGTT
 
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rJMSF051M22+          TAAGCGGAACTTGTAACATCATGTTTTGGAATTCGCTTGCAAGCTTGTAGCATTAGAAAT
rJMSF032G23+          TAAGCGGAACTTGTAACATCATGTTTTGGAATTCGCTTGCAAGCTTGTAGCATTAGAAAT
rJMSF039E02+          TAAGCGGAACTTGTAACATCATGTTTTGGAATTCGCTTGCAAGCTTGTAGCATTAGAAAT
rJMFF003A05+          TAAGCGGAACTTGTAACATCATGTTTTGGAATTCGCTTGCAAGCTTGTAGCATTAGAAAT
                      ____________________________________________________________
consensus             TAAGCGGAACTTGTAACATCATGTTTTGGAATTCGCTTGCAAGCTTGTAGCATTAGAAAT
 
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rJMSF051M22+          ACTAAGCAATACTATGAGGGTTCACCAGTGAGAGCTTGTAGCATTAGAAATACTAAGCAA
rJMSF032G23+          ACTAAGCAATACTATGAGGGTTCACCAGTGAGAGCTTGTAGCATTAGAAATACTAAGCAA
rJMSF039E02+          ACTAAGCAATACTATGAGGGTTCACCAGTGAGAGCTTGTAGCATTAGAAATACTAAGCAA
rJMFF003A05+          ACTAAGCAATACTATGAGGGTTCACCAGTGAGAGCTTGTAGCATTAGAAATACTAAGCAA
                      ____________________________________________________________
consensus             ACTAAGCAATACTATGAGGGTTCACCAGTGAGAGCTTGTAGCATTAGAAATACTAAGCAA
 
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rJMSF051M22+          TACTATGAGGGTTCTCCAGTGAGAGTTTGCAAAATGAGGTGCTAAAATTTTCCCCTTCTA
rJMSF032G23+          TACTATGAGGGTTCTCCAGTGAGAG                                   
rJMSF039E02+          TACTATGAGGGTTCTCCAGTGAGAGTTTGCAAAATGAGGTGCTAAAATTTTCCCCTTCTA
rJMFF003A05+          TACTATGAGGGTTCTCCAGTGAGAGTTTGCAAAATGAGGTGCTAAAATTTTCCCCTTCTA
                      ____________________________________________________________
consensus             TACTATGAGGGTTCTCCAGTGAGAGTTTGCAAAATGAGGTGCTAAAATTTTCCCCTTCTA
 
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rJMSF051M22+          GCCTAC                                                      
rJMSF039E02+          GCCTAC                                                      
rJMFF003A05+          GCCTACAATAATAATGATAGTGTGATACTGAGACATGATGTCTGTGAGATAGAATAAACT
                      ____________________________________________________________
consensus             GCCTACAATAATAATGATAGTGTGATACTGAGACATGATGTCTGTGAGATAGAATAAACT