Contig 006771:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046B19-                        GGGGTGTGTACGGGAAATCCGATCACCAACATAAAGAGAAATGTTAC
                      ____________________________________________________________
consensus                          GGGGTGTGTACGGGAAATCCGATCACCAACATAAAGAGAAATGTTAC
 
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JMSF046B19-           GATCAGTACTTTTTTGTCCCCACTTCACTCTTCCTTCTTCTTCTTCTTCTTCAGTCACAC
                      ____________________________________________________________
consensus             GATCAGTACTTTTTTGTCCCCACTTCACTCTTCCTTCTTCTTCTTCTTCTTCAGTCACAC
 
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JMFF002K03-                         ACATTTGCTTCTATTTTTTAGTAATCTGCGAACCCCTTTTCTCCAC
JMSF046B19-           CTCTACTCTCTCCTACATTTGCTTCTATTTTTTAGTAATCTGCGAACCCCTTTTCTCCAC
                      ____________________________________________________________
consensus             CTCTACTCTCTCCTACATTTGCTTCTATTTTTTAGTAATCTGCGAACCCCTTTTCTCCAC
 
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JMFF002K03-           ATTCATTTCAGAAGCTAAATTCTGTCATAGTCGATTCACTAATTGCTTTTCCCATCCGAT
JMSF046B19-           ATTCATTTCAGAAGCTAAATTCTGTCATAGTCGATTCACTAATTGCTTTTCCCATCCGAT
                      ____________________________________________________________
consensus             ATTCATTTCAGAAGCTAAATTCTGTCATAGTCGATTCACTAATTGCTTTTCCCATCCGAT
 
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JMFF002K03-           TAAGACTAATCAGGTTTATGGTGGAGATCAATCTCTTCTTCCATTACTGTAGCAACTCAT
JMSF046B19-           TAAGACTAATCAGGTTTATGGTGGAGATCAATCTCTTCTTCCATTACTGTAGCAACTCAT
                      ____________________________________________________________
consensus             TAAGACTAATCAGGTTTATGGTGGAGATCAATCTCTTCTTCCATTACTGTAGCAACTCAT
 
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JMFF002K03-           AACATGAAATCTAGCGCAAGTGAGATGTCCAAAGCACAGAGGTCCAAATCTTTTCAGAGG
JMSF046B19-           AACATGAAATCTAGCGCAAGTGAGATGTCCAAAGCACAGAGGTCCAAATCTTTTCAGAGG
                      ____________________________________________________________
consensus             AACATGAAATCTAGCGCAAGTGAGATGTCCAAAGCACAGAGGTCCAAATCTTTTCAGAGG
 
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JMFF002K03-           GAAGGGCCAAACTGGGTCCTAATTGCTGGCAGTGCTTTAATAAGTACCTTATCAATTCGT
JMSF046B19-           GAAGGGCCAAACTGGGTCCTAATTGCTGGCAGTGCTTTAATAAGTACCTTATCAATTCGT
                      ____________________________________________________________
consensus             GAAGGGCCAAACTGGGTCCTAATTGCTGGCAGTGCTTTAATAAGTACCTTATCAATTCGT
 
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JMFF002K03-           TTGGGCTACAAGCTCAAGCAGGTGCTTGATGAGAAGGAACAGAACAGTGCCGATGATGCT
JMSF046B19-           TTGGGCTACAAGCTCAAGCAGGTGCTTGATGAGAAGGAACAGAACAGTGCCGATGATGCT
                      ____________________________________________________________
consensus             TTGGGCTACAAGCTCAAGCAGGTGCTTGATGAGAAGGAACAGAACAGTGCCGATGATGCT
 
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JMFF002K03-           TTAAAAGGAAATGAAAATCCTACCGAGCAAAAGAAGTCCAGGAATTGCTATTTGCAGTCA
JMSF046B19-           TTAAAAGGAAATGAAAATCCTACCGAGCAAAAGAAGTCCAGGAATTGCTATTTGCAGTCA
                      ____________________________________________________________
consensus             TTAAAAGGAAATGAAAATCCTACCGAGCAAAAGAAGTCCAGGAATTGCTATTTGCAGTCA
 
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JMFF002K03-           GGTTCGAATTGTTTAGTCCAAGATGACGAAAACTGCTACAGCTGCCTTTCAGGAACCAGA
JMSF046B19-           GGTTCGAATTGTTTAGTCCAAGATGACGAAAACTGCTACAGCTGCCTTTCAGGAACCAGA
                      ____________________________________________________________
consensus             GGTTCGAATTGTTTAGTCCAAGATGACGAAAACTGCTACAGCTGCCTTTCAGGAACCAGA
 
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JMFF002K03-           CCCATGGTGAGACAACATTGCAATGACCCAGTGTTGAGAGATCCCAAAATGACACTTCCT
JMSF046B19-           CCCATGGTGAGACAACATTGCAATGACCCAGTGTTGAGAGATCCCAAAATGACACTTCCT
                      ____________________________________________________________
consensus             CCCATGGTGAGACAACATTGCAATGACCCAGTGTTGAGAGATCCCAAAATGACACTTCCT
 
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JMFF002K03-           CTTGTGATGGTTCCTGCTCCCGAGTTCAGTAAAG                          
JMSF046B19-           CTTGTGATGGTTCCTGCTCCCGAGTTCAGTAAAGAGAAATGGTGAGGCCTGGTTGTCCTC
rJMSF046B19+                                                                    TC
                      ____________________________________________________________
consensus             CTTGTGATGGTTCCTGCTCCCGAGTTCAGTAAAGAGAAATGGTGAGGCCTGGTTGTCCTC
 
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JMSF046B19-           CACTGACCGTCTTGATCTGCCACAAAAGCCATTGCACAACTCGAATA             
rJMSF046B19+          CACTGACCGTCTTGATCTGCCACAAAAGCCATTGCACAACTCGAATAGTTGTGAATCACT
rJMFF002K03+                                      CCATTGCACAACTCGAATAGTTGTGAATCACT
                      ____________________________________________________________
consensus             CACTGACCGTCTTGATCTGCCACAAAAGCCATTGCACAACTCGAATAGTTGTGAATCACT
 
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rJMSF046B19+          CTGTGTCTCCGAAGCAGGTTCTGATATTTTCCTCAAGCGAGAAGTGATACAAAAGTTGAG
rJMFF002K03+          CTGTGTCTCCGAAGCAGGTTCTGATATTTTCCTCAAGCGAGAAGTGATACAAAAGTTGAG
                      ____________________________________________________________
consensus             CTGTGTCTCCGAAGCAGGTTCTGATATTTTCCTCAAGCGAGAAGTGATACAAAAGTTGAG
 
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rJMSF046B19+          ACAACAGCTGAAGAGAAGGGATGAAACAATACTAGCGATGCAGGAACAGATTGTCGAGTT
rJMFF002K03+          ACAACAGCTGAAGAGAAGGGATGAAACAATACTAGCGATGCAGGAACAGATTGTCGAGTT
                      ____________________________________________________________
consensus             ACAACAGCTGAAGAGAAGGGATGAAACAATACTAGCGATGCAGGAACAGATTGTCGAGTT
 
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rJMSF046B19+          GCAGAGTTCTCTGAATGCTCAGCTTTGCCATTCTACCCATCTTCAGTCTTTACTGGACGT
rJMFF002K03+          GCAGAGTTCTCTGAATGCTCAGCTTTGCCATTCTACCCATCTTCAGTCTTTACTGGACGT
                      ____________________________________________________________
consensus             GCAGAGTTCTCTGAATGCTCAGCTTTGCCATTCTACCCATCTTCAGTCTTTACTGGACGT
 
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rJMSF046B19+          TGCGAATAGGGAGGTTTTTGAGTCAGAGAGAGAAACACAGAGGCTGAGGAAGGCAATTAC
rJMFF002K03+          TGCGAATAGGGAGGTTTTTGAGTCAGAGAGAGAAACACAGAGGCTGAGGAAGGCAATTAC
                      ____________________________________________________________
consensus             TGCGAATAGGGAGGTTTTTGAGTCAGAGAGAGAAACACAGAGGCTGAGGAAGGCAATTAC
 
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rJMSF046B19+          AGATCATTGTGTTGGACAAGTGGATTCTTCTGGCAATCCCCCAACAGGACGTATATGGCC
rJMFF002K03+          AGATCATTGTGTTGGACAAGTGGATTCTTCTGGCAATCCCCCAACAGGACGTATATGGCC
                      ____________________________________________________________
consensus             AGATCATTGTGTTGGACAAGTGGATTCTTCTGGCAATCCCCCAACAGGACGTATATGGCC
 
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rJMSF046B19+          AGTAGAAGGAAGAAAGGATTTTGCAAATGGCCATCGTGAAGTTGAGAAACATTTGGGATC
rJMFF002K03+          AGTAGAAGGAAGAAAGGATTTTGCAAATGGCCATCGTGAAGTTGAGAAACATTTGGGATC
                      ____________________________________________________________
consensus             AGTAGAAGGAAGAAAGGATTTTGCAAATGGCCATCGTGAAGTTGAGAAACATTTGGGATC
 
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rJMSF046B19+          TTCAGAGAAGGAGAGAGCAGATAGGAAACAGATAGAAATGCTGAAACATGAAGTGGATGG
rJMFF002K03+          TTCAGAGAAGGAGAGAGCAGATAGGAAACAGATAGAAATGCTGAAACATGAAGTGGATGG
                      ____________________________________________________________
consensus             TTCAGAGAAGGAGAGAGCAGATAGGAAACAGATAGAAATGCTGAAACATGAAGTGGATGG
 
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rJMSF046B19+          ATTGAAGGAAGCGATTGAAGGGAAGGAATACCTAATCCGGAATTACAAAGACCAAAAGTC
rJMFF002K03+          ATTGAAGGAAGCGATTGAAGGGAAGGAATACCTAATCCGGAATTACAAAGACCAAAAGTC
                      ____________________________________________________________
consensus             ATTGAAGGAAGCGATTGAAGGGAAGGAATACCTAATCCGGAATTACAAAGACCAAAAGTC
 
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rJMSF046B19+          TGAACTCTCTATGAAGATCAAGGAGTTGCAGGAGAGGTTGGATTCTCAACTCCCAAATAT
rJMFF002K03+          TGAACTCTCTATGAAGATCAAGGAGTTGCAGGAGAGGTTGGATTCTCAACTCCCAAATAT
                      ____________________________________________________________
consensus             TGAACTCTCTATGAAGATCAAGGAGTTGCAGGAGAGGTTGGATTCTCAACTCCCAAATAT
 
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rJMSF046B19+          TTTGTAGGCAGAGCCATAGCTTGTGTATTCTTGTTTGGCTTCCATCCCACTTCTTCTATT
rJMFF002K03+          TTTGTAGGCAGAGCCATAGCTTGTGTATTCTTGTTTGGCTTCCATCCCACTTCTTCTATT
                      ____________________________________________________________
consensus             TTTGTAGGCAGAGCCATAGCTTGTGTATTCTTGTTTGGCTTCCATCCCACTTCTTCTATT
 
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rJMSF046B19+          CCCTTAACTTATTTCAGTTCCCAGACAATCCCTTCGTTT                     
rJMFF002K03+          CCCTTAACTTATTTCAGTTCCCAGACAATCCCTTCGTTTTCTTTGATTTTAATTTTATTT
                      ____________________________________________________________
consensus             CCCTTAACTTATTTCAGTTCCCAGACAATCCCTTCGTTTTCTTTGATTTTAATTTTATTT
 
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rJMFF002K03+          AGCCTTCCATCCATATTTTTTCTCCCTTCTGTTTGGTGTGCATATGTGAAGGGAAATTGA
                      ____________________________________________________________
consensus             AGCCTTCCATCCATATTTTTTCTCCCTTCTGTTTGGTGTGCATATGTGAAGGGAAATTGA