Contig 006766:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-                                                 AAACTATGCGAAGCAAATAAAA
                      ____________________________________________________________
consensus                                                   AAACTATGCGAAGCAAATAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           ACACTGCTGACTTGTTACTCAACTCTCTACTCCAGGGAAATTCTACTAGAAACAGGCGAT
                      ____________________________________________________________
consensus             ACACTGCTGACTTGTTACTCAACTCTCTACTCCAGGGAAATTCTACTAGAAACAGGCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           TCAGCATCCTCATTCCTGGAGGCAAGATTCCAGAGTGGTTTAGTGATCAAAAAATGGGCC
                      ____________________________________________________________
consensus             TCAGCATCCTCATTCCTGGAGGCAAGATTCCAGAGTGGTTTAGTGATCAAAAAATGGGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           GTTCTGTATCGATCCCGTTACCTCCAGATTGGCATGCTAATTTCATTGGATTTGCAATAT
                      ____________________________________________________________
consensus             GTTCTGTATCGATCCCGTTACCTCCAGATTGGCATGCTAATTTCATTGGATTTGCAATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           CAGTTGTGTTTGAACCCATGGCGCAAAACTCAAGAATTGGAATCACATTCAAATTGATCA
                      ____________________________________________________________
consensus             CAGTTGTGTTTGAACCCATGGCGCAAAACTCAAGAATTGGAATCACATTCAAATTGATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           GCCAAAACCACAAAGAGTATACAACTGATAGTATCTCCTCTACCACTATGACAGGTGAGA
JMFF005A09-                                                                      A
                      ____________________________________________________________
consensus             GCCAAAACCACAAAGAGTATACAACTGATAGTATCTCCTCTACCACTATGACAGGTGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           TTTGTGAGTCTGGTCATGTGTGGATGGGATTTTTATCGTTCCGTCTTTTCCAGCTTCTAT
JMFF005A09-           TTTGTGAGTCTGGTCATGTGTGGATGGGATTTTTATCGTTCCGTCTTTTCCAGCTTCTAT
                      ____________________________________________________________
consensus             TTTGTGAGTCTGGTCATGTGTGGATGGGATTTTTATCGTTCCGTCTTTTCCAGCTTCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           TCCCAGACATAGGAGTTGACGATTGTACCAAAATCTTTGGGTGCCTCACTATTGCTGTAA
JMFF005A09-           TCCCAGACATAGGAGTTGACGATTGGACCAAAATCTTTGGGTGCCTCACTATTGCTGTAA
rJMFF001I21+           CCCAGACATAGGAGTTGACGATTGTACCAAAATCTTTGGGTGCCTCACTATTGCTGTAA
                      ____________________________________________________________
consensus             TCCCAGACATAGGAGTTGACGATTGTACCAAAATCTTTGGGTGCCTCACTATTGCTGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           GGAATGAGCCATGGAACAAGCCAAAAAGGTGCGGGATTCGCCTGGTGTACAAGGAAGATA
JMFF005A09-           GGAATGAGCCATGGAACAAGCCAAAAAGGTGCGGGATTCGCCTGGTGTACAAGGAAGATA
rJMFF001I21+          GGAATGAGCCATGGAACAAGCCAAAAAGGTGCGGGATTCGCCTGGTGTACAAGGAAGATA
                      ____________________________________________________________
consensus             GGAATGAGCCATGGAACAAGCCAAAAAGGTGCGGGATTCGCCTGGTGTACAAGGAAGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF001I21-           TAGTTAANGAAACAA                                             
JMFF005A09-           TAGTTGAGGAAACAAAAACCTTAAGTACCAAGGACAAGGAGCAATCAGGAAACCTTGCCC
rJMFF001I21+          TAGTTAAGGAAACAAAAACCTTAAGTACCAAGGACAAGGAGCAATCAGGAAACCTTGCCC
                      ____________________________________________________________
consensus             TAGTTAAGGAAACAAAAACCTTAAGTACCAAGGACAAGGAGCAATCAGGAAACCTTGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005A09-           TTGTGGTTTACACTGGAAAACCAGGAGGAACCGAAAGAATAAAAGAAGACGAAGAGGATA
rJMFF001I21+          TTGTGGTTTACACTGGAAAACCAGGAGGAACCGAAAGAATAAAAGAAGACGAAGAGGATA
                      ____________________________________________________________
consensus             TTGTGGTTTACACTGGAAAACCAGGAGGAACCGAAAGAATAAAAGAAGACGAAGAGGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005A09-           TATCTATTCTTACATCTGGTGTTAATGAATTGGGGTGGGAGGTTGACCCTATTGAGGATG
rJMFF005A09+                      CATCNGGTGTTAATGAATTGGGGTGGGAGGTTGACCCTATTGAGGATG
rJMFF001I21+          TATCTATTCTTACATCTGGTGTTAATGAATTGGGGTGGGAGGTTGACCCTATTGAGGATG
                      ____________________________________________________________
consensus             TATCTATTCTTACATCTGGTGTTAATGAATTGGGGTGGGAGGTTGACCCTATTGAGGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005A09-           ATGTGACACAGTTAGATAATTTAAGAAGACATCTGGCTTTCAAGATTCAGAAGACTATTT
rJMFF005A09+          ATGTGACACAGTTAGATAATTTAAGAAGACATCTGGCTTTCAAGATTCAGAAGACTATTT
rJMFF001I21+          ATGTGACACAGTTAGATAATTTAAGAAGACATCTGGCTTTCAAGATTCAGAAGACTATTT
                      ____________________________________________________________
consensus             ATGTGACACAGTTAGATAATTTAAGAAGACATCTGGCTTTCAAGATTCAGAAGACTATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005A09-           CATTTGATTGCTAGCTATCTTTTGGCCCAAGCTAAATAAAGTTGTTTATGCAGCAACTCT
rJMFF005A09+          CATTTGATTGCTAGCTATCTTTTGGCCCAAGCTAAATAAAGTTGTTTATGCAGCAACTCT
rJMFF001I21+          CATTTGATTGCTAGCTATC-TTTGGCCCAAGCTAAATAAAGTTGTTTATGCAGCAACTCT
                      ____________________________________________________________
consensus             CATTTGATTGCTAGCTATCTTTTGGCCCAAGCTAAATAAAGTTGTTTATGCAGCAACTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005A09-           ATCGGGTATTTGCAGATAC                                         
rJMFF005A09+          ATCGGGTATTTGCAGATACTGGTCTGGTGTTTTGCTGCAAATCTGCAATTGGTATTGGAC
rJMFF001I21+          ATCGGGTATTTGCAGATACTGGTCTGGTGTTTTGCTGCAAATCTGCAATTGGTATTGGAC
                      ____________________________________________________________
consensus             ATCGGGTATTTGCAGATACTGGTCTGGTGTTTTGCTGCAAATCTGCAATTGGTATTGGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005A09+          TGCAAGTTTGTTTCAGTTTGATAGTAATATAGTACTGTTGTTGGGTGTGATTTTGTATTG
rJMFF001I21+          TGCAAGTTTGTTTCAGTTTGATAGTAATATAGTACTGTTGTTGGGTGTGATTTTGTATTG
                      ____________________________________________________________
consensus             TGCAAGTTTGTTTCAGTTTGATAGTAATATAGTACTGTTGTTGGGTGTGATTTTGTATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005A09+          TAGATTCATGGTTGGGTAAAATTGTGTTGTGTCCTTATGCAGCAGCTCAAGTTTGCTTAC
rJMFF001I21+          TAGATTCATGGTTGGGTAAAATTGTGTTGTGTCCTTATGCAGCAGCTCAAG-TTGCTTAC
                      ____________________________________________________________
consensus             TAGATTCATGGTTGGGTAAAATTGTGTTGTGTCCTTATGCAGCAGCTCAAGTTTGCTTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005A09+          TTCATGACTTTTATGTTTTGGTATGTAAAAGGTGTGTTAAAGCGTCCTAGATTGGTATCT
rJMFF001I21+          TTCATGACTTTTATGTTTTGGTATGTAAAAGGTGTGTTAAAGCGTCCTAGATTGGTATCT
                      ____________________________________________________________
consensus             TTCATGACTTTTATGTTTTGGTATGTAAAAGGTGTGTTAAAGCGTCCTAGATTGGTATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005A09+          ATATGGTCTTTGTATTTGATGGTTTGTACTGGTATTGTACTGTTGCATAACTTTATATA 
rJMFF001I21+          ATATGGTCTTTGTATTTGATGGTTTGTACTGGTATTGTACTGTTGCATAACTTTATATAG
                      ____________________________________________________________
consensus             ATATGGTCTTTGTATTTGATGGTTTGTACTGGTATTGTACTGTTGCATAACTTTATATAG