Contig 006764:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046N08-                                                                GATGCTC
                      ____________________________________________________________
consensus                                                                  GATGCTC
 
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JMSF046N08-           ATACAGTCATACCTCAGCACAAAACGACGCCATTTTGAAAGTTTCTTCTATATTTTTCCC
                      ____________________________________________________________
consensus             ATACAGTCATACCTCAGCACAAAACGACGCCATTTTGAAAGTTTCTTCTATATTTTTCCC
 
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JMSF046N08-           CACAGGCACAGAAGCGCCTCTAAACTTCCGTTTCTAAATTCCAATGGCGCCCCTCCTCCC
rJMFF001B17+                                            TAAATTCCAATGGCGCCCNTCCTCCC
                      ____________________________________________________________
consensus             CACAGGCACAGAAGCGCCTCTAAACTTCCGTTTCTAAATTCCAATGGCGCCCCTCCTCCC
 
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JMSF046N08-           C-GGCCGGCTCCTCATCTTCTTCTCCGTCGCCGCCGCGATATTCCTATTTTGCCCTCTCC
rJMSF046N08+                                  CCGTCGCCGCCGCGATATTCCTATTTTGCCCTCTCC
rJMFF001B17+          CGGGCCGGCTCCTCATCTTCTTCTCCGTCGCCGCCGCGATATTCCTATTTTGCCCTCTCC
                      ____________________________________________________________
consensus             CGGGCCGGCTCCTCATCTTCTTCTCCGTCGCCGCCGCGATATTCCTATTTTGCCCTCTCC
 
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JMSF046N08-           GCTCGGCCGCCATCTCCATCCACGATCTCCTGAAGTCGCAGGGCTTGCCTGCCGGACTCT
rJMSF046N08+          GCTCGGCCGCCATCTCCATCCACGATCTCCTGAAGTCGCAGGGCTTGCCTGCCGGACTCT
rJMFF001B17+          GCTCGGCCGCCATCTCCATCCACGATCTCCTGAAGTCGCAGGGCTTGCCTGCCGGACTCT
                      ____________________________________________________________
consensus             GCTCGGCCGCCATCTCCATCCACGATCTCCTGAAGTCGCAGGGCTTGCCTGCCGGACTCT
 
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JMSF046N08-           TCCCCAAGGAAGTGAAGAACTACACGCTGTCGGAGGATGGGGTTCTGGAGGTGTTCCTCG
rJMSF046N08+          TCCCCAAGGAAGTGAAGAACTACACGCTGTCGGAGGATGGGGTTCTGGAGGTGTTCCTCG
rJMFF001B17+          TCCCCAAGGAAGTGAAGAACTACACGCTGTCGGAGGATGGGGTTCTGGAGGTGTTCCTCG
                      ____________________________________________________________
consensus             TCCCCAAGGAAGTGAAGAACTACACGCTGTCGGAGGATGGGGTTCTGGAGGTGTTCCTCG
 
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JMSF046N08-           ACGGCCCCTGCCTCACAAAGTTCGATACCATGGCGTTCTACGAGAGCGTGGTGAGAGCTA
rJMSF046N08+          ACGGCCCCTGCCTCACAAAGTTCGATACCATGGCGTTCTACGAGAGCGTGGTGAGAGCTA
rJMFF001B17+          ACGGCCCCTGCCTCACAAAGTTCGATACCATGGCGTTCTACGAGAGCGTGGTGAGAGCTA
                      ____________________________________________________________
consensus             ACGGCCCCTGCCTCACAAAGTTCGATACCATGGCGTTCTACGAGAGCGTGGTGAGAGCTA
 
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JMSF046N08-           ATCTCTCCCACGGCGGCCTCTCCGGCGTCCAAGGCTTCTCGCAGGAGGAGCTCTTCGTCT
rJMSF046N08+          ATCTCTCCCACGGCGGCCTCTCCGGCGTCCAAGGCTTCTCGCAGGAGGAGCTCTTCGTCT
rJMFF001B17+          ATCTCTCCCACGGCGGCCTCTCCGGCGTCCAAGGCTTCTCGCAGGAGGAGCTCTTCGTCT
                      ____________________________________________________________
consensus             ATCTCTCCCACGGCGGCCTCTCCGGCGTCCAAGGCTTCTCGCAGGAGGAGCTCTTCGTCT
 
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JMSF046N08-           GGCTGCCGGTGAAAGGAGTAATCGTCGACGATCCTGCCTCCGGCCTCATCTTCATTGATA
rJMSF046N08+          GGCTGCCGGTGAAAGGAGTAATCGTCGACGATCCTGCCTCCGGCCTCATCTTCATTGATA
rJMFF001B17+          GGCTGCCGGTGAAAGGAGTAATCGTCGACGATCCTGCCTCCGGCCTCATCTTCATTGATA
                      ____________________________________________________________
consensus             GGCTGCCGGTGAAAGGAGTAATCGTCGACGATCCTGCCTCCGGCCTCATCTTCATTGATA
 
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JMSF046N08-           TCGGCTTGGCTCACAAGCAGCTCTCCCTCTCGCTCTTCGAAGATCCGCCGGATTGCAAAA
rJMSF046N08+          TCGGCTTGGCTCACAAGCAGCTCTCCCTCTCGCTCTTCGAAGATCCGCCGGATTGCAAAA
rJMFF001B17+          TCGGCTTGGCTCACAAGCAGCTCTCCCTCTCGCTCTTCGAAGATCCGCCGGATTGCAAAA
                      ____________________________________________________________
consensus             TCGGCTTGGCTCACAAGCAGCTCTCCCTCTCGCTCTTCGAAGATCCGCCGGATTGCAAAA
 
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JMSF046N08-           ACGACGAGGTTACAGGTGTATTAGAGGAAGCTGGGGAAGAAGAAGAGAGATTCGAAGATG
rJMSF046N08+          ACGACGAGGTTACAGGTGTATTAGAGGAAGCTGGGGAAGAAGAAGAGAGATTCGAAGATG
rJMFF001B17+          ACGACGAGGTTACAGGTGTATTAGAGGAAGCTGGGGAAGAAGAAGAGAGATTCGAAGATG
                      ____________________________________________________________
consensus             ACGACGAGGTTACAGGTGTATTAGAGGAAGCTGGGGAAGAAGAAGAGAGATTCGAAGATG
 
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JMSF046N08-           CATAAAGAGAGAAATATATGTTTTTAAGGAATGCAACCTCGTTTGGTGTTCTTATATATC
rJMSF046N08+          CATAAAGAGAGAAATATATGTTTTTAAGGAATGCAACCTCGTTTGGTGTTCTTATATATC
rJMFF001B17+          CATAAAGAGAGAAATATATGTTTTTAAGGAATGCAACCTCGTTTGGTGTTCTTATATATC
                      ____________________________________________________________
consensus             CATAAAGAGAGAAATATATGTTTTTAAGGAATGCAACCTCGTTTGGTGTTCTTATATATC
 
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JMSF046N08-           ATAGTCTTATCCTAGTATATATGAGTATAACCGTGAATCTATTACTTTGATTCACGATTT
rJMSF046N08+          ATAGTCTTATCCTAGTATATATGAGTATAACCGTGAATCTATTACTTTGATTCACGATTT
rJMFF001B17+          ATAGTCTTATCCTAGTATATATGAGTATAACCGTGAATCTATTACTTTGATTCACGATTT
                      ____________________________________________________________
consensus             ATAGTCTTATCCTAGTATATATGAGTATAACCGTGAATCTATTACTTTGATTCACGATTT
 
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JMSF046N08-           AATCTGTGTATTTTTGAGTAATGCATGGATAA                            
rJMSF046N08+          AATCTGTGTATTTTTGAGTAATGCATGGATAAAATTTTAGTATTAGGTAATGTTGTATTA
rJMFF001B17+          AATCTGTGTATTTTTGAGTAATGCATGGATAAAATTTTAGTATTAGGTAATGTTGTATTA
                      ____________________________________________________________
consensus             AATCTGTGTATTTTTGAGTAATGCATGGATAAAATTTTAGTATTAGGTAATGTTGTATTA
 
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rJMSF046N08+          GTTAGAAATGTAAAGATATCGGGAAC                                  
rJMFF001B17+          GTTAGAAATGTAAAGATATCGGGAACAACAACAGTTTTCAGTTTTATTAAAAGTATTATT
                      ____________________________________________________________
consensus             GTTAGAAATGTAAAGATATCGGGAACAACAACAGTTTTCAGTTTTATTAAAAGTATTATT