Contig 006758:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF052G16-                                       TCGTTTTTNGTTAGTTCCATGCTATGATTCC
                      ____________________________________________________________
consensus                                          TCGTTTTTNGTTAGTTCCATGCTATGATTCC
 
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rJMSF052G16-          ATCTGAAAGCAAGGTAAACTAACAGAATAACAGCTAGAAATGGGTATTTCGATGGGTGAA
                      ____________________________________________________________
consensus             ATCTGAAAGCAAGGTAAACTAACAGAATAACAGCTAGAAATGGGTATTTCGATGGGTGAA
 
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rJMSF052G16-          AAATGATAAATTAGCTACGATCCCACAGGAAATGACTTATTCTTGTGATAATTGCTCACG
                      ____________________________________________________________
consensus             AAATGATAAATTAGCTACGATCCCACAGGAAATGACTTATTCTTGTGATAATTGCTCACG
 
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rJMSF052G16-          GTATAAATAAAATCATGCTAGCACACAGAATAAACCAGAGAATGGTATGATTGAACTGAA
                      ____________________________________________________________
consensus             GTATAAATAAAATCATGCTAGCACACAGAATAAACCAGAGAATGGTATGATTGAACTGAA
 
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rJMSF052G16-          AGGATCTACGCATTTTCTTGGCAGTCTATGCTTTGTGATTCTTTGCCATCTCGTCCACAT
JMSF052G16+                                    CTATGCTTTGTGATTCTTTGCCATCTCGTCCACAT
                      ____________________________________________________________
consensus             AGGATCTACGCATTTTCTTGGCAGTCTATGCTTTGTGATTCTTTGCCATCTCGTCCACAT
 
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rJMSF052G16-          CCAGCTCGACTTCAAGCACAGGTGTACCCTTCTGGATGCTAAAATTGCTGTTGTTAACAG
rJMCP015C07+                                     CCTTCTGGATGCTAAAATTGCTGTTGTTAACAG
JMSF052G16+           CCAGCTCGACTTCAAGCACAGGTGTACCCTTCTGGATGCTAAAATTGCTGTTGTTAACAG
                      ____________________________________________________________
consensus             CCAGCTCGACTTCAAGCACAGGTGTACCCTTCTGGATGCTAAAATTGCTGTTGTTAACAG
 
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rJMSF052G16-          GGCCATGATCAACAGCTGATTTTAGACAGTAAATAACTCTACCGATTATATCAGCCATGC
rJMCP015C07+          GGCCATGATCAACAGCTGATTTTAGACAGTAAATAACTCTACCGATTATATCAGCCATGC
JMSF052G16+           GGCCATGATCAACAGCTGATTTTAGACAGTAAATAACTCTACCGATTATATCAGCCATGC
                      ____________________________________________________________
consensus             GGCCATGATCAACAGCTGATTTTAGACAGTAAATAACTCTACCGATTATATCAGCCATGC
 
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rJMSF052G16-          AAACGGGGCCAAATGTTCGGCTATCATTTGCATCCTTGGGCTTTATGTTTTCATTGTCAG
rJMCP015C07+          AAACGGGGCCAAATGTTCGGCTATCATTTGCATCCTTGGGCTTTATGTTTTCATTGTCAG
JMSF052G16+           AAACGGGGCCAAATGTTCGGCTATCATTTGCATCCTTGGGCTTTATGTTTTCATTGTCAG
                      ____________________________________________________________
consensus             AAACGGGGCCAAATGTTCGGCTATCATTTGCATCCTTGGGCTTTATGTTTTCATTGTCAG
 
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rJMSF052G16-          CTACTACCCAGCACTGATCTTCTTCAAGTACAAATGGTTCATCTTTTTCATCAGTGGAAG
rJMCP015C07+          CTACTACCCAGCACTGATCTTCTTCAAGTACAAATGGTTCATCTTTTTCATCAGTGGAAG
JMSF052G16+           CTACTACCCAGCACTGATCTTCTTCAAGTACAAATGGTTCATCTTTTTCATCAGTGGAAG
                      ____________________________________________________________
consensus             CTACTACCCAGCACTGATCTTCTTCAAGTACAAATGGTTCATCTTTTTCATCAGTGGAAG
 
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rJMSF052G16-          CCATCTCATATCCTTCAATGGCAGCCAATCTCCGCACCAGAAAATTGTCATGCTTAACAG
rJMCP015C07+          CCATCTCATATCCTTCAATGGCAGCCAATCTCCGCACCAGAAAATTGTCATGCTTAACAG
JMFN037F16+                                                CAGAAAATTGTCATGCTTAACAG
JMSF052G16+           CCATCTCATATCCTTCAATGGCAGCCAATCTCCGCACCAGAAAATTGTCATGCTTAACAG
                      ____________________________________________________________
consensus             CCATCTCATATCCTTCAATGGCAGCCAATCTCCGCACCAGAAAATTGTCATGCTTAACAG
 
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rJMSF052G16-          GGTCCCTAAGGACTACAACATCTCCTACAAAAACTTTCATTGGATTTGGCATAGGTATCT
rJMCP015C07+          GGTCCCTAAGGACTACAACATCTCCTACAAAAACTTTCATTGGATTTGGCATAGGTATCT
JMFN037F16+           GGTCCGTAAGGACTACAACATCTCCTACAAAAACTTTCATTGGATTTGGCATAGGTATCT
JMSF052G16+           GGTCCCTAAGGACTACAACATCTCCTACAAAAACTTTCATTGGATTTGGCATAGGTATCT
                      ____________________________________________________________
consensus             GGTCCCTAAGGACTACAACATCTCCTACAAAAACTTTCATTGGATTTGGCATAGGTATCT
 
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rJMSF052G16-          TCCGCACAAGTAGGGTTCCACCCTGAGCTCCTACTGTTGGTGCCATCTCTTCTCCTCCTT
rJMCP015C07+          TCCGCACAAGTAGGGTTCCACCCTGAGCTCCTACTGTTGGTGCCATCTCTTCTCCTCCTT
JMFN037F16+           TCCGCACAAGTAGGGTTCCACCCTGAGCTCCTACTGTTGGTGCCATCTCTTCTCCTCCTT
JMSF052G16+           TCCGCACAAGTAGGGTTCCACCCTGAGCTCCTACTGTTGGTGCCATCTCTTCTCCTCCTT
                      ____________________________________________________________
consensus             TCCGCACAAGTAGGGTTCCACCCTGAGCTCCTACTGTTGGTGCCATCTCTTCTCCTCCTT
 
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rJMSF052G16-          TATTGAAGTGCACGAATGTTAACTTTCCTTGAAAGAAATGCTTAAATATGGCATCACCAG
rJMCP015C07+          TATTGAAGTGCACGAATGTTAACTTTCCTTGAAAGAAATGCTTAAATATGGCATCACCAG
JMFN037F16+           TATTGAAGTGCACGAATGTTAACTTTCCTTGAAAGAAATGCTTAAATATGGCATCACCAG
JMSF052G16+           TATTGAAGTGCACGAATGTTAACTTTCCTTGAAAGAAATGCTTAAATATGGCATCACCAG
                      ____________________________________________________________
consensus             TATTGAAGTGCACGAATGTTAACTTTCCTTGAAAGAAATGCTTAAATATGGCATCACCAG
 
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rJMSF052G16-          CTTCTCTCTCTGTGATATTTCCTGCAGTGTAGTTCTTCCAGCAGAGATGATACGCATACT
rJMCP015C07+          CTTCTCTCTCTGTGATATTTCCTGCAGTGTAGTTCTTCCAGCAGAGATGATACGCATACT
JMFN037F16+           CTTCTCTCTCTGTGATATTTCCTGCAGTGTAGTTCTTCCAGCAGAGATGATACGCATACT
JMSF052G16+           CTTCTCTCTCTGTGATATTTCCTGCAGTGTAGTTCTTCCAGCAGAGATGATACGCATACT
                      ____________________________________________________________
consensus             CTTCTCTCTCTGTGATATTTCCTGCAGTGTAGTTCTTCCAGCAGAGATGATACGCATACT
 
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rJMSF052G16-          CGGCTTTGTTAGCTAGGTAGCGGATCCAGGTAGATGTGGAAACCATCGCCGATNGGGTTG
rJMCP015C07+          CGGCTTTGTTAGCTAGGTAGCGGATCCAGGTAGATGTGGAAACCATCGCCGATTGGGTTG
JMFN037F16+           CGGCTTTGTTAGCTAGGTAGCGGATCCAGGTAGATGTGGAAACCATCGCCGATTGGGTTG
JMSF052G16+           CGGCTTTGTTAGCTAGGTAGCGGATCCAGGTAGATGTGGAAACCATCGCCGATTGGGTTG
                      ____________________________________________________________
consensus             CGGCTTTGTTAGCTAGGTAGCGGATCCAGGTAGATGTGGAAACCATCGCCGATTGGGTTG
 
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rJMSF052G16-          CGTTCTTGCCGTAGCTCAAATGTCGTCG                                
rJMCP015C07+          CGTTCTTGCCGTAGCTCAAATGTCGTCGTCTTC                           
JMFN037F16+           CGTTCTTGCCGTAGCTCAAATGTCGTCGTCTTCGCCGGAGTCGG                
JMSF052G16+           CGTTCTTGCCGTAGCTCAAATGTCGTCGTCTTCGCCGGAGTCGGGTTTTAGGCTTTCAGC
                      ____________________________________________________________
consensus             CGTTCTTGCCGTAGCTCAAATGTCGTCGTCTTCGCCGGAGTCGGGTTTTAGGCTTTCAGC