Contig 006756:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039M05Sequence609006756 (3)gb|AFU52654.1|4e-78beta-1,3-glucanase 21 [Solanum tuberosum]741007256 (4)ref|XP_009631831.1|2e-63PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana tomentosiformis] ref|XP
JMSF052E10Sequence702006756 (3)gb|AFU52654.1|5e-93beta-1,3-glucanase 21 [Solanum tuberosum]907007256 (4)ref|XP_009631831.1|2e-83PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana tomentosiformis] ref|XP
JMSF052P03Sequence703006756 (3)gb|AFU52654.1|2e-96beta-1,3-glucanase 21 [Solanum tuberosum]953007256 (4)ref|XP_009631831.1|2e-84PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana tomentosiformis] ref|XP

Alignment

This contig is upended


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JMSF052P03+                           ATCAGATTTAACATATTCATAATACGGATAAGCATTTAGCATGT
JMSF052E10+                           ATCAGATTTAACATATTCATAATACGGATAAGCATTTAGCATGT
                      ____________________________________________________________
consensus                             ATCAGATTTAACATATTCATAATACGGATAAGCATTTAGCATGT
 
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JMFF039M05+                                                             TTCGACGAGA
JMSF052P03+           AGTACGAATTCGTGTTCTGCAGAAACTGAAGGATCTGGAAAACAGTGGAGTTCGACGAGA
JMSF052E10+           AGTACGAATTCGTGTTCTGCAGAAACTGAAGGATCTGGAAAACAGTGGAGTTCGACGAGA
                      ____________________________________________________________
consensus             AGTACGAATTCGTGTTCTGCAGAAACTGAAGGATCTGGAAAACAGTGGAGTTCGACGAGA
 
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JMFF039M05+           AGTTGAAAGTGGGCTGTGGATGGGGGGAAGATCTTAGCAATTAGGTCGGTCGATTGAGGT
JMSF052P03+           AGTTGAAAGT-GGCTGTGGATGGGGGGAAGATCTTAGCAATTAGGTCGGTCGATTGAGGT
JMSF052E10+           AGTTGAAAGT-GGCTGTGGATGGGGGGAAGATCTTAGCAATTAGGTCGGTCGATTGAGGT
                      ____________________________________________________________
consensus             AGTTGAAAGT-GGCTGTGGATGGGGGGAAGATCTTAGCAATTAGGTCGGTCGATTGAGGT
 
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JMFF039M05+           GTCGAGACTTTGACTTGACTATTCAGGTTTGCGGAAACTAAGGCTTTATGTAGGTAATTC
JMSF052P03+           GTCGAGACTTTGACTTGACTATTCAGGTTTGCGGAAACTAAGGCTTTATGTAGGTAATTC
JMSF052E10+           GTCGAGACTTTGACTTGACTATTCAGGTTTGCGGAAACTAAGGCTTTATGTAGGTAATTC
                      ____________________________________________________________
consensus             GTCGAGACTTTGACTTGACTATTCAGGTTTGCGGAAACTAAGGCTTTATGTAGGTAATTC
 
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JMFF039M05+           ATAGCAGGGACTAGAACGGGTGCAGCATTCGGAATCGAAGTAAGGACTTCACTTCCCACC
JMSF052P03+           ATAGCAGGGACTAGAACGGGTGCAGCATTCGGAATCGAAGTAAGGACTTCACTTCCCACC
JMSF052E10+           ATAGCAGGGACTAGAACGGGTGCAGCATTCGGAATCGAAGTAAGGACTTCACTTCCCACC
                      ____________________________________________________________
consensus             ATAGCAGGGACTAGAACGGGTGCAGCATTCGGAATCGAAGTAAGGACTTCACTTCCCACC
 
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JMFF039M05+           GCAATAGCTGTAATGTTAGTCGATGGTAGATAAGCTGCCACATTCTTGTTTACCCACGCT
JMSF052P03+           GCAATAGCTGTAATGTTAGTCGATGGTAGATAAGCTGCCACATTCTTGTTTACCCACGCT
JMSF052E10+           GCAATAGCTGTAATGTTAGTCGATGGTAGATAAGCTGCCACATTCTTGTTTACCCACGCT
                      ____________________________________________________________
consensus             GCAATAGCTGTAATGTTAGTCGATGGTAGATAAGCTGCCACATTCTTGTTTACCCACGCT
 
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JMFF039M05+           GCCGCCTGAGAAGAGGATTGGCCAATACCTAAGACCTCGTTATTTGTGACGCCAACAATA
JMSF052P03+           GCCGCCTGAGAAGAGGATTGGCCAATACCTAAGACCTCGTTATTTGTGACGCCAACAATA
JMSF052E10+           GCCGCCTGAGAAGAGGATTGGCCAATACCTAAGACCTCGTTATTTGTGACGCCAACAATA
                      ____________________________________________________________
consensus             GCCGCCTGAGAAGAGGATTGGCCAATACCTAAGACCTCGTTATTTGTGACGCCAACAATA
 
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JMFF039M05+           ACTTCAATCCCGGTGTTCGATAGAGCACTCAGCATATGAGCATCAGCATCAAATAGACGG
JMSF052P03+           ACTTCAATCCCGGTGTTCGATAGAGCACTCAGCATATGAGCATCAGCATCAAATAGACGG
JMSF052E10+           ACTTCAATCCCGGTGTTCGATAGAGCACTCAGCATATGAGCATCAGCATCAAATAGACGG
                      ____________________________________________________________
consensus             ACTTCAATCCCGGTGTTCGATAGAGCACTCAGCATATGAGCATCAGCATCAAATAGACGG
 
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JMFF039M05+           GCATGCTTTATCTGACGAGCTTTAAGAAGTTCAACCACATCCTTAGCTGACGGTAGGTTA
JMSF052P03+           ACATGCTTTATCTGACGAGCTTTAAGAAGTTCAACCACATCCTTAGCTGACGGTAGGTTA
JMSF052E10+           ACATGCTTTATCTGACGAGCTTTAAGAAGTTCAACCACATCCTTAGCTGACGGTAGGTTA
                      ____________________________________________________________
consensus             ACATGCTTTATCTGACGAGCTTTAAGAAGTTCAACCACATCCTTAGCTGACGGTAGGTTA
 
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JMFF039M05+           GAGACATCGGTGCCAATGTTTATCCCCACAAACGCACCTACGAAATTGGACAATAACCCG
JMSF052P03+           GAGACATCGGTGCCAATGTTTATCCCCACAAACGCACCTACGAAATTGGACAATAACCCG
JMSF052E10+           GAGACATCGGTGCCAATGTTTATCCCCAC-AACGCACCTACGAAATTGGACAATAACCCG
                      ____________________________________________________________
consensus             GAGACATCGGTGCCAATGTTTATCCCCACAAACGCACCTACGAAATTGGACAATAACCCG
 
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JMFF039M05+           CATATAAGCAGGGAAATTCCTAGCCATAG                               
JMSF052P03+           CATATAAGCAGGGAAATTCCTAGCCATAG                               
JMSF052E10+           CATATAAGCAGGGAAATTCCTAGCCATAGCCATAGTTTAAGCATTGTTAGCTGCAGCAAA
                      ____________________________________________________________
consensus             CATATAAGCAGGGAAATTCCTAGCCATAGCCATAGTTTAAGCATTGTTAGCTGCAGCAAA
 
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JMSF052E10+           ATAATCAATTTCGTTTCTCCTCTATTTAGCGACACCCAGCTGTAGTAGAGAAACAAGGCC
                      ____________________________________________________________
consensus             ATAATCAATTTCGTTTCTCCTCTATTTAGCGACACCCAGCTGTAGTAGAGAAACAAGGCC