Contig 006752:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF007D04-                                   AATTTCACCATAGTACTAAGCAGTGAAGCACTGCA
                      ____________________________________________________________
consensus                                      AATTTCACCATAGTACTAAGCAGTGAAGCACTGCA
 
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rJMSF007D04-          GCCTAGATGTGGTCCCATAAACACCTATACAGAACTTAATCACAGGCTTTAATCTTCAAG
                      ____________________________________________________________
consensus             GCCTAGATGTGGTCCCATAAACACCTATACAGAACTTAATCACAGGCTTTAATCTTCAAG
 
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rJMSF007D04-          AAAACCAAGACCACACTTAACAGAATAAAAATTTGCATTTCCACTGAATCACAACCTGAC
                      ____________________________________________________________
consensus             AAAACCAAGACCACACTTAACAGAATAAAAATTTGCATTTCCACTGAATCACAACCTGAC
 
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rJMSF007D04-          AAATTAGACCTCCAAGAAGATACTTCCAATTCTCGGCAAGAAGCTTGATCTCAGCTGTAG
                      ____________________________________________________________
consensus             AAATTAGACCTCCAAGAAGATACTTCCAATTCTCGGCAAGAAGCTTGATCTCAGCTGTAG
 
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rJMSF006D04-               GCACAAATTCTCTTCCATAGCCTCTCCACAGAACAGAAATAACAAGTGAATCAAG
rJMSF007D04-          TCTCTGCACAAATTCTCTTCCATAGCCTCTCCACAGAACAGAAATAACAAGTGAATCAAG
                      ____________________________________________________________
consensus             TCTCTGCACAAATTCTCTTCCATAGCCTCTCCACAGAACAGAAATAACAAGTGAATCAAG
 
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rJMSF006D04-          AAAATGCCTTATTTTTGTTAAACGAGAGAATAAAATATGGAATTTAAATCAAAGAAGTAT
rJMSF007D04-          AAAATGCCTTATTTTTGTTAAACGAGAGAATAAAATATGGAATTTAAATCAAAGAAGTAT
                      ____________________________________________________________
consensus             AAAATGCCTTATTTTTGTTAAACGAGAGAATAAAATATGGAATTTAAATCAAAGAAGTAT
 
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rJMSF006D04-          CTTGAAGCANTATAGCAGAG                                        
rJMSF007D04-          CTTGAAGCAATATAGCAGAGAAAAAAGACGAACCTTTGAAGCCTCGCGACCAATGTAAAG
JMSF051O01+                                            CTTTGAAGCCTCGCGACCAATGTAAAG
                      ____________________________________________________________
consensus             CTTGAAGCAATATAGCAGAGAAAAAAGACGAACCTTTGAAGCCTCGCGACCAATGTAAAG
 
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rJMSF007D04-          CGACATCTTCTTCGTCTGTGTGCACCACTACCACCACTTCCATATTACATCAGAAACCTA
JMSF051O01+           CGACATCTTCTTCGTCTGTGTGCACCACTACCACCACTTCCATATTACATCAGAAACCTA
                      ____________________________________________________________
consensus             CGACATCTTCTTCGTCTGTGTGCACCACTACCACCACTTCCATATTACATCAGAAACCTA
 
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rJMSF007D04-          CTGCGAAGGTCAACATCGCTCATCCCGAGCCCCCCTTTCTTCCTCGGAAAACAACGCAAT
JMFF033G14+                  GGTCAACATCGCTCATCCCGAGCCCCCCTTTCTTCCTCGGAAAACAACGCAAT
JMSF051O01+           CTGCGAAGGTCAACATCGCTCATCCCGAGCCCCCCTTTCTTCCTCGGAAAACAACGCAAT
                      ____________________________________________________________
consensus             CTGCGAAGGTCAACATCGCTCATCCCGAGCCCCCCTTTCTTCCTCGGAAAACAACGCAAT
 
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rJMSF007D04-          TCCAATTCCGACGACCCGAACTCGGCCACGATCGCCAAAAAGGAAAATCCCGGGAACCGG
JMSF007D04+                                                                  ACCGG
JMFF033G14+           TCCAATTCCGACGACCCGAACTCGGCCACGATCGCCAAAAAGGAAAATCCCGGGAACCGG
JMSF051O01+           TCCAATTCCGACGACCCGAACTCGGCCACGATCGCCAAAAAGGAAAATCCCGGGAACCGG
                      ____________________________________________________________
consensus             TCCAATTCCGACGACCCGAACTCGGCCACGATCGCCAAAAAGGAAAATCCCGGGAACCGG
 
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rJMSF007D04-          CGGCAAACGACAAGGAATCCGAGGATTCCCTCGACGTAAAAT-CAAACTACGGGATCTCA
JMSF007D04+           CGGCAAACGACAAGGAATCCGAGGATTCCCTCGACGTAAAAT-CAAACTACGGGATCTCA
JMFF033G14+           CGGCAAACGACAAGGAATCCGAGGATTCCCTCGACGTAAAAT-CAAACTACGGGATCTCA
JMSF006D04+                                 GGATTCCCTCGACGTAAAATCCAAACTACGGGATCTCA
JMSF051O01+           CGGCAAACGACAAGGAATCCGAGGATTCCCTCGACGTAAAAT-CAAACTACGGGATCTCA
                      ____________________________________________________________
consensus             CGGCAAACGACAAGGAATCCGAGGATTCCCTCGACGTAAAAT-CAAACTACGGGATCTCA
 
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rJMSF007D04-          ATTCGAGAAACGACCAAATTAAATGACAACCCAAATCCCACAATCGCAGAACAAAGTCTG
JMSF007D04+           ATTCGAGAAACGACCAAATTAAATGACAACCCAAATCCCACAATCGCAGAACAAAGTCTG
JMFF033G14+           ATTCGAGAAACGACCAAATTAAATGACAACCCAAATCCCACAATCGCAGAACAAAGTCTG
JMSF006D04+           ATTCGAGAAACGACCAAATTAAATGACAACCCAAATCCCACAATCGCAGAACAAAGTCTG
JMSF051O01+           ATTCGAGAAACGACCAAATTAAATGACAACCCAAATCCCACAATCGCAGAACAAAGTCTG
                      ____________________________________________________________
consensus             ATTCGAGAAACGACCAAATTAAATGACAACCCAAATCCCACAATCGCAGAACAAAGTCTG
 
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rJMSF007D04-          AGGAAAATCAATTCCACAATGGCAATTCAAAG                            
JMSF007D04+           AGGAAAATCAATTCCACAATGGCAATTCAAAGACATAAAGAAATTGACCGATCGATTCCT
JMSF010P07+                                GCAATTCAAAGACATAAAGAAATTGACCGATCGATTCCT
JMFF033G14+           AGGAAAATCAATTCCACAATGGCAATTCAAAGACATAAAGAAATTGACCGATCGATTCCT
JMSF006D04+           AGGAAAATCAATTCCACAATGGCAATTCAAAGACATAAAGAAATTGACCGATCGATTCCT
JMSF051O01+           AGGAAAATCAATTCCACAATGGCAATTCAAAGACATAAAGAAATTGACCGATCGATTCCT
                      ____________________________________________________________
consensus             AGGAAAATCAATTCCACAATGGCAATTCAAAGACATAAAGAAATTGACCGATCGATTCCT
 
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JMSF007D04+           CTATCTACATACTGTGTTTACGCGTGTATTTTTTTTA--TTTTTTATTTTTCTCTTCAGT
JMSF010P07+           CTATCTACATACTGTGTTTACGCGTGTATTTTTTTTATTTTTTTTATTTTTCTCTTCAGT
JMFF033G14+           CTATCTACATACTGTGTTTACGCGTGTATTTTTTTTA-TTTTTTTATTTTTCTCTTCAGT
JMSF006D04+           CTATCTACATACTGTGTTTACGCGTGTATTTTTTTTA--TTTTTTATTTTTCTCTTCAGT
JMSF051O01+           CTATCTACATACTGTGTTTACGCGTGTATTTTTTTTA-TTTTTTTATTTTTCTCTTCAGT
                      ____________________________________________________________
consensus             CTATCTACATACTGTGTTTACGCGTGTATTTTTTTTA-TTTTTTTATTTTTCTCTTCAGT
 
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JMSF007D04+           TCTCTCTCTATATAAATGTATATTTTATCTGCGTCTCGGGGTGATTCGTCTCCTTAGATG
JMSF010P07+           TCTCTCTCTATATAAATGTATATTTTATCTGCGTCTCGGGGTGATTCGTCTCCTTAGATG
JMFF033G14+           TCTCTCTCTATATAAATGTATATTTTATCTGCGTCTCGGGGTGATTCGTCTCCTTAGATG
JMSF006D04+           TCTCTCTCTATATAAATGTATATTTTATCTGCGTCTCGGGGTGATTCGTCTCCTTAGATG
JMSF051O01+           TCTCTCTCTATATAAATGTATATTTTATCTGCGTCTCGGGGTGATTCGTCTCCTTAGATG
                      ____________________________________________________________
consensus             TCTCTCTCTATATAAATGTATATTTTATCTGCGTCTCGGGGTGATTCGTCTCCTTAGATG
 
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JMSF007D04+           CTAAGACTGCTAAAAACGCGAGTCGAACACGGAGCGGCAGTTGAGT              
JMSF010P07+           CTAAGACTGCTAAAAACGCGAGTCGAACACGGAGCGGCAGTTGAGT              
JMFF033G14+           CTAAGACTGCTAAAAACGCGAGTCGAACACGGAGCGGCAGTTGAGTTCCAGAGAGAGAGA
JMSF006D04+           CTAAGACTGCTAAAAACGCGAGTCGAACACGGAGCGGCAGTTGAGT              
JMSF051O01+           CTAAGACTGCTAAAAACGCGAGTCGAACACGGAGCGGCAGTTGAGTTCCAGAGAGAGAGA
                      ____________________________________________________________
consensus             CTAAGACTGCTAAAAACGCGAGTCGAACACGGAGCGGCAGTTGAGTTCCAGAGAGAGAGA
 
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JMFF033G14+           GGGGAGGGAGAAACAAGAGAGCCTTTTTAAAACACTGGGAAAAGGAAAATCGCCGGTACG
JMSF051O01+           GGGGAGGGAGAAACAAGAGAGCCTTTTTAAAACACTGGGAAAAGGAAAATCGCCGGTACG
                      ____________________________________________________________
consensus             GGGGAGGGAGAAACAAGAGAGCCTTTTTAAAACACTGGGAAAAGGAAAATCGCCGGTACG
 
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JMFF033G14+           AGAAAAACTGTCTCCCTTTGCGAAAATTTGCTGGAAATTCGAG                 
JMSF051O01+           AGAAAAACTGTCTCCCTTTGCGAAAATTTGCTGGAAATTCGAGACTGAAAATGAACCCCC
                      ____________________________________________________________
consensus             AGAAAAACTGTCTCCCTTTGCGAAAATTTGCTGGAAATTCGAGACTGAAAATGAACCCCC