| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022K20 | Sequence | 496 | 006749 (6) | emb|CDP10179.1| | 6e-55 | unnamed protein product [Coffea canephora] | 682 | 006749 (6) | ref|NP_001275630.1| | 6e-53 | uncharacterized protein LOC102597373 [Solanum tuberosum] ref|XP_004249187.1| PRE |
| JMFF048K08 | Sequence | 412 | 006749 (6) | ref|NP_001275630.1| | 1e-49 | uncharacterized protein LOC102597373 [Solanum tuberosum] ref|XP_004249187.1| PRE | |||||
| JMFN031H11 | Sequence | 625 | 006749 (6) | emb|CDP10179.1| | 7e-81 | unnamed protein product [Coffea canephora] | |||||
| JMSF051G03 | Sequence | 670 | 006749 (6) | emb|CDP10179.1| | 3e-77 | unnamed protein product [Coffea canephora] | 713 | 006749 (6) | ref|NP_001275630.1| | 5e-78 | uncharacterized protein LOC102597373 [Solanum tuberosum] ref|XP_004249187.1| PRE |
This contig is upended
. : . : . : . : . : . :
rJMFF022K20- ACATTAAAGATTCAAACTTTC
____________________________________________________________
consensus ACATTAAAGATTCAAACTTTC
. : . : . : . : . : . :
rJMFF022K20- AATGAAAATGGTCAAGCAAAGATAAAACATTTTCCATGAACGTAGTTTCTATGAAACAAA
rJMSF051G03- A
____________________________________________________________
consensus AATGAAAATGGTCAAGCAAAGATAAAACATTTTCCATGAACGTAGTTTCTATGAAACAAA
. : . : . : . : . : . :
rJMFF022K20- CTATGTCCCCGAGATAAAATTATTGCTATCATCAAAGTGTAAACCAAAAATCTGAAACAG
rJMSF051G03- CTATGTCCCCGAGATAAAATTATTGCTATCATCAAAGTGTAAACCAAAAATCTGAAACAG
____________________________________________________________
consensus CTATGTCCCCGAGATAAAATTATTGCTATCATCAAAGTGTAAACCAAAAATCTGAAACAG
. : . : . : . : . : . :
rJMFF022K20- CTATTTCTAATAGCAAAAACTCAAAATAGATTCAAAAAGGTAAACTGGAAAAATAAATTA
rJMSF051G03- CTATTTCTAATAGCAAAAACTCAAAATAGATTCAAAAAGGTAAACTGGAAAAATAAATTA
____________________________________________________________
consensus CTATTTCTAATAGCAAAAACTCAAAATAGATTCAAAAAGGTAAACTGGAAAAATAAATTA
. : . : . : . : . : . :
rJMFF022K20- TTAATAAGACAAGAATTTGGATCACCGGGATCAATTGGTCTTTGGATCAGGCATAGGGAA
rJMSF051G03- TTAATAAGACAAGAATTTGGATCACCGGGATCAATTGGTCTTTGGATCAGGCATAGGGAA
JMFN031H11+ GGAA
____________________________________________________________
consensus TTAATAAGACAAGAATTTGGATCACCGGGATCAATTGGTCTTTGGATCAGGCATAGGGAA
. : . : . : . : . : . :
rJMFF022K20- GAGGCCAGCTCCAGCAGCTCCGCGCGGTGGTGCGAACCCTAAGAACTTCTGAAGATTTGT
rJMSF051G03- GAGGCCAGCTCCAGCAGCTCCGCGCGGTGGTGCGAACCCTAAGAACTTCTGAAGATTTGT
JMFN031H11+ GAGGCCAGCTCCAGCAGCTCCGCGCGGTGGTGCGAACCCTAAGAACTTCTGAAGATTTGT
JMSF051G03+ GAAGATTTGT
____________________________________________________________
consensus GAGGCCAGCTCCAGCAGCTCCGCGCGGTGGTGCGAACCCTAAGAACTTCTGAAGATTTGT
. : . : . : . : . : . :
rJMFF022K20- GCGAATACTAATTGAGCAAAGGAAGTACAAAAATGCCATTGAACAATCCGTCATATCCTC
rJMSF051G03- GCGAATACTAATTGAGCAAAGGAAGTACAAAAATGCCATTGAACAATCCGTCATATCCTC
JMFN031H11+ GCGAATACTAATTGAGCAAAGGAAGTACAAAAATGCCATTGAACAATCCGTCATATCCTC
JMSF051G03+ GCGAATACTAATTGAGCAAAGGAAGTACAAAAATGCCATTGAACAATCCGTCATATCCTC
____________________________________________________________
consensus GCGAATACTAATTGAGCAAAGGAAGTACAAAAATGCCATTGAACAATCCGTCATATCCTC
. : . : . : . : . : . :
rJMFF022K20- CCCGGGCAACCCTCGGTGGCTCATCTTCTGAACGAGCCGAATGGGCACAAAGGGCAATTT
rJMSF051G03- CCCGGGCAACCCTCGGTGGCTCATCTTCTGAACGAGCCGAATGGGCACAAAGGGCAATTT
JMFN031H11+ CCCGGGCAACCCTCGGTGGCTCATCTTCTGAACGAGCCGAATGGGCACAAAGGGCAATTT
JMFF022K20+ TCTTCTGAACGAGCCGAATGGGCACAAAGGGCAATTT
JMSF051G03+ CCCGGGCAACCCTCGGTGGCTCATCTTCTGAACGAGCCGAATGGGCACAAAGGGCAATTT
____________________________________________________________
consensus CCCGGGCAACCCTCGGTGGCTCATCTTCTGAACGAGCCGAATGGGCACAAAGGGCAATTT
. : . : . : . : . : . :
rJMFF022K20- CGCCACTGGCTTCCCCTCAAACAGGTTGTTGAGAAACCCGAAGACCAGAAAGAGAACCAC
rJMSF051G03- CGCCACTGGCTTCCCCTCAAACAGGTTGTTGAGAAACCCGAAGACCAGAAAGAGAACCAC
JMFF048K08+ GAGAACCAC
JMFN031H11+ CGCCACTGGCTTCCCCTCAAACAGGTTGTTGAGAAACCCGAAGACCAGAAAGAGAACCAC
JMFF022K20+ CGCCACTGGCTTCCCCTCAAACAGGTTGTTGAGAAACCCGAAGACCAGAAAGAGAACCAC
JMSF051G03+ CGCCACTGGCTTCCCCTCAAACAGGTTGTTGAGAAACCCGAAGACCAGAAAGAGAACCAC
____________________________________________________________
consensus CGCCACTGGCTTCCCCTCAAACAGGTTGTTGAGAAACCCGAAGACCAGAAAGAGAACCAC
. : . : . : . : . : . :
rJMFF022K20- CGCCACTACAAACCCTGATTTGAACTTGAAGAGTGAGAGGTCGCGACTGGACTCCTTGAG
rJMSF051G03- CGCCACTACAAACCCTGATTTGAACTTGAAGAGTGAGAGGTCGCGACTGGACTCCTTGAG
JMFF048K08+ CGCCACTACAAACCCTGATTTGAACTTGAAGAGTGAGAGGTCGCGACTGGACTCCTTGAG
JMFN031H11+ CGCCACTACAAACCCTGATTTGAACTTGAAGAGTGAGAGGTCGCGACTGGACTCCTTGAG
JMFF022K20+ CGCCACTACAAACCCTGATTTGAACTTGAAGAGTGAGAGGTCGCGACTGGACTCCTTGAG
JMSF051G03+ CGCCACTACAAACCCTGATTTGAACTTGAAGAGTGAGAGGTCGCGACTGGACTCCTTGAG
____________________________________________________________
consensus CGCCACTACAAACCCTGATTTGAACTTGAAGAGTGAGAGGTCGCGACTGGACTCCTTGAG
. : . : . : . : . : . :
rJMFF022K20- TGAGGTCTCGACGCGATCGATTTTCTTAGTTTTGGACTTTTTAGTGGTCAAGAAAGCAGC
rJMSF051G03- TGAGGTCTCGACGCAATCGATTTTCTTAGTTTTGGACTTTTTAGTGGTCAAGAAAGCAGC
JMFF048K08+ TGAGGTCTCGACGCGATCGATTTTCTTAGTTTTGGACTTTTTAGTGGTCAAGAAAGCAGC
JMFN031H11+ TGAGGTCTCGACGCGATCGATTTTCTTAGTTTTGGACTTTTTAGTGGTCAAGAAAGCAGC
JMFF022K20+ TGAGGTCTCGACGCGATCGATTTTCTTAGTTTTGGACTTTTTAGTGGTCAAGAAAGCAGC
JMSF051G03+ TGAGGTCTCGACGCAATCGATTTTCTTAGTTTTGGACTTTTTAGTGGTCAAGAAAGCAGC
____________________________________________________________
consensus TGAGGTCTCGACGCGATCGATTTTCTTAGTTTTGGACTTTTTAGTGGTCAAGAAAGCAGC
. : . : . : . : . : . :
rJMFF022K20- GGGATTGGATAATTCAAGGGTTTTCATGGTCTCAAGCTTCTTGGAGGCCTTGTCGATGGT
rJMSF051G03- GGGATTGGATAATTCAAGGGTTTTCATGGTCTCAAGCTTCTTGGAGGCCTTGTCGATGGT
JMFF048K08+ GGGATTGGATAATTCAAGGGTTTTCATGGTCTCAAGCTTCTTGGAGGCCTTGTCGATGGT
JMFN031H11+ GGGATTGGATAATTCAAGGGTTTTCATGGTCTCAAGCTTCTTGGAGGCCTTGTCGATGGT
JMFF022K20+ GGGATTGGATAATTCAAGGGTTTTCATGGTCTCAAGCTTCTTGGAGGCCTTGTCGATGGT
JMSF051G03+ GGGATTGGATAATTCAAGGGTTTTCATGGTCTCAAGCTTCTTGGAGGCCTTGTCGATGGT
____________________________________________________________
consensus GGGATTGGATAATTCAAGGGTTTTCATGGTCTCAAGCTTCTTGGAGGCCTTGTCGATGGT
. : . : . : . : . : . :
rJMFF022K20- G
rJMSF051G03- GGATTTCAGAGATTTGTAAGAGTTGGTGCGGTAGATTAGAAGCCATGAGATAGCTTCGCA
JMFF048K08+ GGATTTCAGAGATTTGTAAGAGTTGGTGCGGTAGATTAGAAGCCATGAGATAGCTTCGCA
JMFN031H11+ GGATTTCAGAGATTTGTAAGAGTTGGTGCGGTAGATTAGAAGCCATGAGATAGCTTCGCA
JMFF022K20+ GGATTTCAGAGATTTGTAAGAGTTGGTGCGGTAGATTAGAAGCCATGAGATAGCTTCGCA
JMSF051G03+ GGATTTCAGAGATTTGTAAGAGTTGGTGCGGTAGATTAGAAGCCATGAGATAGCTTCGCA
____________________________________________________________
consensus GGATTTCAGAGATTTGTAAGAGTTGGTGCGGTAGATTAGAAGCCATGAGATAGCTTCGCA
. : . : . : . : . : . :
rJMSF051G03- GATTACTGCAGTGCAGATTGAGATGCCGACGACGGTGAGGCTGTCGGAGTAC
JMFF048K08+ GATTACTGCAGTGCAGATTGAGATGCCGACGACGGTGAGGCTGTCGGAGTACCGGAGGTG
JMFN031H11+ GATTACTGCAGTGCAGATTGAGATGCCGACGACGGTGAGGCTGTCGGAGTACCGGAGGTG
JMFF022K20+ GATTACTGCAGTGCAGATTGAGATGCCGACGACGGTGAGGCTGTCGGAGTACCGGAGGTG
JMSF051G03+ GATTACTGCAGTGCAGATTGAGATGCCGACGACGGTGAGGCTGTCGGAGTACCGGAGGTG
____________________________________________________________
consensus GATTACTGCAGTGCAGATTGAGATGCCGACGACGGTGAGGCTGTCGGAGTACCGGAGGTG
. : . : . : . : . : . :
JMFF048K08+ GGAGAACGTTGTCGCCGCCATCTGTGTCGCCGAGATATTGAAGGGAATAGCGAAGAAAAC
JMFN031H11+ GGAGAACGTTGTCGCCGCCATCTGTGTCGCCGAGATATTGAAGGGAATAGCGAAGAAAAC
JMFF022K20+ GGAGAACGTTGTCGCCGCCATCTGTGTCGCCGAGATATTGAAGGGAATAGCGAAGAAAAC
JMSF051G03+ GGAGAACGTTGTCGCCGCCATCTGTGTCGCCGAGATATTGAAGGGAATAGCGAAGAAAAC
____________________________________________________________
consensus GGAGAACGTTGTCGCCGCCATCTGTGTCGCCGAGATATTGAAGGGAATAGCGAAGAAAAC
. : . : . : . : . : . :
JMFF048K08+ TTC
JMFN031H11+ TTCTTTCAAATGAAAGA
JMFF022K20+ TTCTTTCAAATGAAAGATGGGGGAGTTCTTTTTATGGGC
JMSF051G03+ TTCTTTCAAATGAAAGATGGGGGAGTTCTTTTTATGGGCAAAGTTTGACTTCCAGACTAT
____________________________________________________________
consensus TTCTTTCAAATGAAAGATGGGGGAGTTCTTTTTATGGGCAAAGTTTGACTTCCAGACTAT
. : . : . : . : . : . :
JMSF051G03+ AACCTCATAACTTAATGAAAAGGGAATTCCATTGAGAGTTGTGGTTCGTTTATTCCATCC
____________________________________________________________
consensus AACCTCATAACTTAATGAAAAGGGAATTCCATTGAGAGTTGTGGTTCGTTTATTCCATCC