| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004K21 | Sequence | 367 | 006747 (8) | ref|XP_009622729.1| | 1e-28 | PREDICTED: phosphoinositide phospholipase C 4-like [Nicotiana tomentosiformis] | 736 | 012471 (7) | ref|NP_001234181.1| | 4e-99 | PI-phospholipase C PLC4 [Solanum lycopersicum] gb|ABW81000.1| PI-phospholipase C |
| JMFF021J16 | Sequence | 574 | 006747 (8) | ref|XP_009622729.1| | 1e-86 | PREDICTED: phosphoinositide phospholipase C 4-like [Nicotiana tomentosiformis] | 738 | 012471 (7) | ref|NP_001234181.1| | 5e-97 | PI-phospholipase C PLC4 [Solanum lycopersicum] gb|ABW81000.1| PI-phospholipase C |
| JMFF027L14 | Sequence | 509 | 006747 (8) | emb|CAA65127.1| | 9e-59 | phosphoinositide-specific phospholipase C [Nicotiana rustica] | 733 | 012471 (7) | ref|NP_001234181.1| | 4e-99 | PI-phospholipase C PLC4 [Solanum lycopersicum] gb|ABW81000.1| PI-phospholipase C |
| JMFF048O09 | Sequence | 600 | 006747 (8) | ref|XP_009622729.1| | 5e-90 | PREDICTED: phosphoinositide phospholipase C 4-like [Nicotiana tomentosiformis] | 512 | 012471 (7) | ref|NP_001234181.1| | 4e-70 | PI-phospholipase C PLC4 [Solanum lycopersicum] gb|ABW81000.1| PI-phospholipase C |
| JMFF049I17 | Sequence | 545 | 006747 (8) | emb|CAA65127.1| | 1e-69 | phosphoinositide-specific phospholipase C [Nicotiana rustica] | 581 | 012471 (7) | emb|CDP09195.1| | 3e-52 | unnamed protein product [Coffea canephora] |
| JMSF015C10 | Sequence | 227 | 006747 (8) | 751 | 012471 (7) | ref|NP_001234181.1| | 5e-108 | PI-phospholipase C PLC4 [Solanum lycopersicum] gb|ABW81000.1| PI-phospholipase C | |||
| JMSF033M17 | Sequence | 675 | 006747 (8) | emb|CAA65127.1| | 6e-116 | phosphoinositide-specific phospholipase C [Nicotiana rustica] | 708 | 012471 (7) | ref|NP_001234181.1| | 3e-103 | PI-phospholipase C PLC4 [Solanum lycopersicum] gb|ABW81000.1| PI-phospholipase C |
| JMSF050O21 | Sequence | 621 | 006747 (8) | ref|XP_009622729.1| | 3e-73 | PREDICTED: phosphoinositide phospholipase C 4-like [Nicotiana tomentosiformis] | 752 | 016220 | ref|NP_001234181.1| | 1e-124 | PI-phospholipase C PLC4 [Solanum lycopersicum] gb|ABW81000.1| PI-phospholipase C |
This contig is upended
. : . : . : . : . : . :
JMSF033M17+ TCTTCCAGTGTTATTACAACTGGG
____________________________________________________________
consensus TCTTCCAGTGTTATTACAACTGGG
. : . : . : . : . : . :
JMSF033M17+ TAGGGAGAGGCAACAAAGGCATTCTCCTTTATTGACTTCAGACATTTTATGAGTTCCACA
____________________________________________________________
consensus TAGGGAGAGGCAACAAAGGCATTCTCCTTTATTGACTTCAGACATTTTATGAGTTCCACA
. : . : . : . : . : . :
JMSF033M17+ GGAGTTGTCACTGTCCTTCCATGAAGAACAATCACATCATCCTTTGCTGAGTTTGGCCAT
JMFF048O09+ GAAGAACAATCACATCATCCTNTGCTGAGTTGGGCCAT
JMFF021J16+ GGCCAT
____________________________________________________________
consensus GGAGTTGTCACTGTCCTTCCATGAAGAACAATCACATCATCCTTTGCTGAGTTTGGCCAT
. : . : . : . : . : . :
JMSF033M17+ ATATCAAGCTCTATAACCCTTACACCTCTCTTCAGTGCCTTAATTATTGGAACATCACTG
JMFF048O09+ ATATCAAGCTCTATAACCCTTACACCTCTCTTCAGTGCCTTAATTATTGGAACATCACTG
JMFF021J16+ ATATCAAGCTCTATAACCCTTACACCTCTCTTCAGTGCCTTAATTATTGGAACATCACTG
JMFF049I17+ CTG
JMSF050O21+ TTAATTATTGGAACATCACTG
____________________________________________________________
consensus ATATCAAGCTCTATAACCCTTACACCTCTCTTCAGTGCCTTAATTATTGGAACATCACTG
. : . : . : . : . : . :
JMSF033M17+ CAATCACTTGTCAGCTGATTTCCAGTCAAGTACGAATTATGCCCAGTGAATATATAATAA
JMFF048O09+ CAATCACTTGTCAGCTGATTTCCAGTCAAGTACGAATTATGCCCAGTGAATATATAATAA
JMFF021J16+ CAATCACTTGTCAGCTGATTTCCAGTCAAGTACGAATTATGCCCAGTGAATATATAATAA
JMFF027L14+ GAATTATGCCCAGTGAATATATAATAA
JMFF049I17+ CAATCACTTGTCAGCTGATTTCCAGTCAAGTACGAATTATGCCCAGTGAATATATAATAA
JMSF050O21+ CAATCACTTGTCAGCTGATTTCCAGTCAAGTACGAATTATGCCCAGTGAATATATAATAA
____________________________________________________________
consensus CAATCACTTGTCAGCTGATTTCCAGTCAAGTACGAATTATGCCCAGTGAATATATAATAA
. : . : . : . : . : . :
JMSF033M17+ TGGGATAAGGGAGCTGTCATATCATGATGAACCTTTGAAATGATTGGGGGGTTGAGGTCG
JMFF048O09+ TGGGATAAGGGAGCTGTCATATCATGATGAACCTTTGAAATGATTGGGGGGTTGAGGTCG
JMFF021J16+ TGGGATAAGGGAGCTGTCATATCATGATGAACCTTTGAAATGATTGGGGGGTTGAGGTCG
JMFF027L14+ TGGGATAAGGGAGCTGTCATATCATGANGAACCTTTGAAATGATTGGGGGGTTGAGGTCG
JMFF049I17+ TGGGATAAGGGAGCTGTCATATCATGATGAACCTTTGAAATGATTGGGGGGTTGAGGTCG
JMSF050O21+ TGGGATAAGGGAGCTGTCATATCATGATGAACCTTTGAAATGATTGGGGGGTTGAGGTCG
____________________________________________________________
consensus TGGGATAAGGGAGCTGTCATATCATGATGAACCTTTGAAATGATTGGGGGGTTGAGGTCG
. : . : . : . : . : . :
JMSF033M17+ GCGTTGAAGAGGAAATGGTGGAAATCGTCGAGAGCGAGATTGCGACGAGTTAACTTGGAA
JMFF048O09+ GCGTTGAAGAGGAAATGGTGGAAATCGTCGAGAGCGAGATTGCGACGAGTTAACTTGGAA
JMFF021J16+ GCGTTGAAGAGGAAATGGTGGAAATCGTCGAGAGCGAGATTGCGACGAGTTAACTTGGAA
JMFF027L14+ GCGTTGAAGAGGAAATGGTGGAAATCGTCGAGAGCGAGATTGCGACGAGTTAACTTGGAA
JMFF049I17+ GCGTTGAAGAGGAAATGGTGGAAATCGTCGAGAGCGAGATTGCGACGAGTTAACTTGGAA
JMFF004K21+ TGGAA
JMSF050O21+ GCGTTGAAGAGGAAATGGTGGAAATCGTCGAGAGCGAGATTGCGACGAGTTAACTTGGAA
____________________________________________________________
consensus GCGTTGAAGAGGAAATGGTGGAAATCGTCGAGAGCGAGATTGCGACGAGTTAACTTGGAA
. : . : . : . : . : . :
JMSF033M17+ ATGGGGTGGCGTTTGTGGAGGATCTGCTGCACGATCGCTTCCGCCTCCGCGAGAGTGGCT
JMFF048O09+ ATGGGGTGGCGTTTGTGGAGGATCTGCTGCACGATCGCTTCCGCCTCCGCGAGAGTGGCT
JMFF021J16+ ATGGGGTGGCGTTTGTGGAGGATCTGCTGCACGATCGCTTCCGCCTCCGCGAGAGTGGCT
JMFF027L14+ ATGGGGTGGCGTTTGTGGAGGATCTGCTGCACGATCGCTTCCGCCTCCGCGAGAGTGGCT
JMFF049I17+ ATGGGGTGGCGTTTGTGGAGGATCTGCTGCACGATCGCTTCCGCCTCCGCGAGAGTGGCT
JMFF004K21+ ATGGGGTGGCGTTTGTGGAGGATCTGNTGCACGATCGCTTCCGCCTCCGCGAGAGTGGCT
JMSF050O21+ ATGGGGTGGCGTTTGTGGAGGATCTGCTGCACGATCGCTTCCGCCTCCGCGAGAGTGGCT
____________________________________________________________
consensus ATGGGGTGGCGTTTGTGGAGGATCTGCTGCACGATCGCTTCCGCCTCCGCGAGAGTGGCT
. : . : . : . : . : . :
JMSF033M17+ TCCTTTTGTCCCTGCTCCTCCGTGAGGAAGCGCAGCAGCTGCTCCGAGCTCATCTGGCTC
JMFF048O09+ TCCTTTTGTCCCTGCTCCTCCGTGAGGAAGCGCAGCAGCTGCTCCGAGCTCATCTGGCTC
JMFF021J16+ TCCTTTTGTCCCTGCTACTCCGTGAGGAAGCGCAGCAGCTGCTCCGAGCTCATCTGGCTC
JMFF027L14+ TCCTTTTGTCCCTGCTCCTCCGTGAGGAAGCGCAGCAGCTGCTCCGAGCTCATCTGGCTC
JMFF049I17+ TCCTTTTGTCCCTGCTCCTCCGTGAGGAAGCGCAGCAGCTGCTCCGAGCTCATCTGGCTC
JMFF004K21+ TCCTTTTGTCCCTGCTCCTCCGTGAGGAAGCGCAGCAGCTGCTCCGAGCTCATCTGGCTC
JMSF050O21+ TCCTTTTGTCCCTGCTCCTCCGTGATGAAGCGCAGCAGCTGCTCCGAGCTCATCTGGCTC
____________________________________________________________
consensus TCCTTTTGTCCCTGCTCCTCCGTGAGGAAGCGCAGCAGCTGCTCCGAGCTCATCTGGCTC
. : . : . : . : . : . :
JMSF033M17+ CCTTCCTCCGCATACTTCTTGAACGCCTCCTTCACGTCCGCCGCCGGCTGCGCCTCCGTC
JMFF048O09+ CCTTCCTCCGCATACTTCTTGAACGCCTCCTTCACGTCCGCCGCCGGCTGCGCCTCCGTC
JMFF021J16+ CCTTCCTCCGCATACTTCTTGAACGCCTCCTTCACGTCCGCCGCCGGCTGCGCCTCCGTC
JMFF027L14+ CCTTCCTCCGCATACTTCTTGAACGCCTCCTTCACGTCCGCCGCCGGCTGCGCCTCCGTC
JMFF049I17+ CCTTCCTCCGCATACTTCTTGAACGCCTCCTTCACGTCCGCCGCCGGCTGCGCCTCCGTC
JMFF004K21+ CCTTCCTCCGCATACTTCTTGAACGCCTCCTTCACGTCCGCCGCCGGCTGCGCCTCCGTC
JMSF050O21+ CCTTCCTCCGCATACTTCTTGAACGCCTCCTTCACGTCCGCCGCCGGCTGCGCCTCCGTC
____________________________________________________________
consensus CCTTCCTCCGCATACTTCTTGAACGCCTCCTTCACGTCCGCCGCCGGCTGCGCCTCCGTC
. : . : . : . : . : . :
JMSF033M17+ ACCTTAAACTTCCTCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATC--GA
JMFF048O09+ ACCTTAAACTTCCTCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATCCAAA
JMFF021J16+ ACCTTAAACTTCCTCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATCCAAA
JMFF027L14+ ACCTTAAACTTCCTCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATCCAAA
JMFF049I17+ ACCTTAAACTTCCTCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATCCAAA
JMFF004K21+ ACCTTAAACTTCCTCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATCCAAA
JMSF015C10+ TCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATCCAAA
JMSF050O21+ ACCTTAAACTTCCTCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATCCAAA
____________________________________________________________
consensus ACCTTAAACTTCCTCGTGAAACACATACAAACTCTGTAACTCCCCATTCCCAAATCCAAA
. : . : . : . : . : . :
JMSF033M17+ TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTC
JMFF048O09+ TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTCACGCCCGGAT
JMFF021J16+ TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTCACGCCCGGAT
JMFF027L14+ TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTCACGCCCGGAT
JMFF049I17+ TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTCACGCCCGGAT
JMFF004K21+ TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTCACGCCCGGAT
JMSF015C10+ TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTCACGCCCGGAT
JMSF050O21+ TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTCACGCCCGGAT
____________________________________________________________
consensus TCCCTCAAGAAACGAAGAAAGAAGATGAATTGTTAGACACTTCACAGTTCACGCCCGGAT
. : . : . : . : . : . :
JMFF048O09+ TTCAAATTTCCGACGCTGCTT
JMFF021J16+ TTCAAATTTCCGACGCTGCTTCAT
JMFF027L14+ TTCAAATTTCCGAAGCTGCTTCATACTACGACTGCCGCTATAGAGAATGCATATATACAC
JMFF049I17+ TTCAAATTTCCGACGCTGCTTCATACTACGACTGCCGCTATAGAGAATGCATATATACAC
JMFF004K21+ TTCAAATTTCCGAAGCTGCTTCATACTACGACTGCCGCTATAGAGAATGCATATATACAC
JMSF015C10+ TTCAAATTTCCGACGCTGCTTCATACTACGACTGCCGCTATAGAGAATGCATATATACAC
JMSF050O21+ TTCAAATTTCCGACGCTGCTTCATACTACGACTGCCGCTATAGAGAATGCATATATACAC
____________________________________________________________
consensus TTCAAATTTCCGACGCTGCTTCATACTACGACTGCCGCTATAGAGAATGCATATATACAC
. : . : . : . : . : . :
JMFF027L14+ A
JMFF049I17+ A
JMFF004K21+ A
JMSF015C10+ ACACAATATACGTTAGTGTGTGTGAAGATTTTGGTGTGTAGTTTCCGTGTCTGATC
JMSF050O21+ ACACAATATACGTTAGTGTGTGTGAAGATTTTGGTGTGTAGTTTCCGTGTCTGATCCCCC
____________________________________________________________
consensus ACACAATATACGTTAGTGTGTGTGAAGATTTTGGTGTGTAGTTTCCGTGTCTGATCCCCC