Contig 006745:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050M13+                                                     TGACAACCTTTTTCTTCT
                      ____________________________________________________________
consensus                                                       TGACAACCTTTTTCTTCT
 
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JMFF029O20+                          TCTTTGACATATCCTCACTGTCGGTAGGAAGTTGAGAAACCATCA
JMSF050M13+           TTTTCACTGGTTGTGTCTTTGACATATCCTCACTGTCGGTAGGAAGTTGAGAAACCATCA
                      ____________________________________________________________
consensus             TTTTCACTGGTTGTGTCTTTGACATATCCTCACTGTCGGTAGGAAGTTGAGAAACCATCA
 
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JMFF029O20+           TGTGCTTGTTCTCTCTGTGCTCATCAGCTGAAGATTCTTGTGGTGTAACAGCAATCAGAC
JMSF050M13+           TGTGCTTGTTCTCTCTGTGCTCATCAGCTGAAGATTCTTGTGGTGTAACAGCAATCAGAC
                      ____________________________________________________________
consensus             TGTGCTTGTTCTCTCTGTGCTCATCAGCTGAAGATTCTTGTGGTGTAACAGCAATCAGAC
 
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JMFF029O20+           TGTTCTGGGCAAACGAGTGGCCATCATCATCCCCCGGTCCAATTTCCAAATCAATCTCTT
JMSF050M13+           TGTTCTGGGCAAACGAGTGGCCATCATCATCCCCCGGTCCAATTTCCAAATCAATCTCTT
                      ____________________________________________________________
consensus             TGTTCTGGGCAAACGAGTGGCCATCATCATCCCCCGGTCCAATTTCCAAATCAATCTCTT
 
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JMFF029O20+           CTATCTCCCTTACCACCAGGTGATGCCTCTGAGCCTGCTGAATCAAATTCATGTCATCCA
JMSF050M13+           CTATCTCCCTTACCACCAGGTGATGCCTCTGAGCCTGCTGAATCAAATTCATGTCATCCA
                      ____________________________________________________________
consensus             CTATCTCCCTTACCACCAGGTGATGCCTCTGAGCCTGCTGAATCAAATTCATGTCATCCA
 
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JMFF029O20+           TTGTAGAATTCATCCCACCCCCACCGATGGGAAGCAGCATTCAGCATGACAATTTAGGAA
JMSF050M13+           TTGTAGAATTCATCCCACCCCCACCGATGGGAAGCAGCATTCAGCATGACAATTTAGGAA
                      ____________________________________________________________
consensus             TTGTAGAATTCATCCCACCCCCACCGATGGGAAGCAGCATTCAGCATGACAATTTAGGAA
 
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JMFF029O20+           CAACTTGATTTTAACAGTCTGGAATTAAATTCCAAAGTCTGAGCTGCCCACGAGTCAGAA
JMSF050M13+           CAACTTGATTTTAACAGTCTGGAATTAAATTCCAAAGTCTGAGCTGCCCACGAGTCAGAA
                      ____________________________________________________________
consensus             CAACTTGATTTTAACAGTCTGGAATTAAATTCCAAAGTCTGAGCTGCCCACGAGTCAGAA
 
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JMFF029O20+           GTCAGAACCCAGTCTTGCGGCGCCGTGTTCCCACGGGCCAATCGAGGAAAAGAAACCGAA
JMSF050M13+           GTCAGAACCCAGTCTTGCGGCGCCGTGTTCCCACGGGCCAATCGAGGAAAAGAAACCGAA
                      ____________________________________________________________
consensus             GTCAGAACCCAGTCTTGCGGCGCCGTGTTCCCACGGGCCAATCGAGGAAAAGAAACCGAA
 
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JMFF029O20+           AAAAAGCTTGATTGAGTATGATCAGAAAATCCCCTGGAGCTGGGTGTATGAGTAGAAGGA
JMSF050M13+           AAAAAGCTTGATTGAGTATGATCAGAAAATCCCCTGGAGCTGGGTGTATGAGTAGAAGGA
                      ____________________________________________________________
consensus             AAAAAGCTTGATTGAGTATGATCAGAAAATCCCCTGGAGCTGGGTGTATGAGTAGAAGGA
 
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JMFF029O20+           AGAGTAA                                                     
JMSF050M13+           AGAGTAATTAGAAAAGGAGAGTGATTGTGTGTGCATGCATGTTAGATGAATTGAGTGTAT
                      ____________________________________________________________
consensus             AGAGTAATTAGAAAAGGAGAGTGATTGTGTGTGCATGCATGTTAGATGAATTGAGTGTAT
 
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JMSF050M13+           CGTCACTGCGGGTGAAAGAGACAAAGGTGGATGGATTCACAGACTTCAACTGTAACTCTC
                      ____________________________________________________________
consensus             CGTCACTGCGGGTGAAAGAGACAAAGGTGGATGGATTCACAGACTTCAACTGTAACTCTC