Contig 006743:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004N07Sequence234006743 (3)emb|CDP11286.1|3e-24unnamed protein product [Coffea canephora]
JMSF050L03Sequence685006743 (3)ref|XP_011078428.1|3e-63PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570776005850 (2)ref|XP_006358123.1|2e-39PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570
JMSF052F06Sequence720006743 (3)emb|CDP06347.1|1e-63unnamed protein product [Coffea canephora]958005850 (2)ref|XP_009604301.1|2e-77PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570

Alignment

This contig is upended


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JMSF052F06+                                                                     AA
                      ____________________________________________________________
consensus                                                                       AA
 
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JMSF052F06+           ATGAAGATTCCCTTGTAAACTCAAATATTCCAAGGTGGGAAATGTTGGAGATTGTGGATG
JMSF050L03+                                                GGAAATGTTGGAGATTGTGGATG
                      ____________________________________________________________
consensus             ATGAAGATTCCCTTGTAAACTCAAATATTCCAAGGTGGGAAATGTTGGAGATTGTGGATG
 
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JMSF052F06+           GGATAGGGCCAGATAATTTATTAAAATCCAAAACTAGCTTCTTGAGAAAATGAAGCTTGC
JMSF050L03+           GGATAGGGCCAGATAATTTATTAAAATCCAAAACTAGCTTCTTGAGAAAATGAAGCTTGC
                      ____________________________________________________________
consensus             GGATAGGGCCAGATAATTTATTAAAATCCAAAACTAGCTTCTTGAGAAAATGAAGCTTGC
 
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JMSF052F06+           CAATATCCTTAGGAATATGGCCTTCTATAAGATTGGATGTGAAGTTTAAGGCTTCAAGAT
JMSF050L03+           CAATATCCTTAGGAATATGGCCTTCTATAAGATTGGATGTGAAGTTTAAGGCTTCAAGAT
                      ____________________________________________________________
consensus             CAATATCCTTAGGAATATGGCCTTCTATAAGATTGGATGTGAAGTTTAAGGCTTCAAGAT
 
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JMSF052F06+           TTGACAAGTTTAGAAACGAAAGTGGGATAGAACCTGTAAACCCATTATGACCAAGATTCA
JMSF050L03+           TTGACAAGTTTAGAAACGAAAGTGGGATAGAACCTGTAAACCCATTATGACCAAGATTCA
                      ____________________________________________________________
consensus             TTGACAAGTTTAGAAACGAAAGTGGGATAGAACCTGTAAACCCATTATGACCAAGATTCA
 
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JMSF052F06+           ATATTTGGAGATTGGATAGGAACCCAAACCACGAAGGGACTTCTCCAGAAAGATTGTTGG
JMSF050L03+           ATATTTGGAGATTGGATAGGAACCCAAACCACGAAGGGACTTCTCCAGAAAGATTGTTGG
                      ____________________________________________________________
consensus             ATATTTGGAGATTGGATAGGAACCCAAACCACGAAGGGACTTCTCCAGAAAGATTGTTGG
 
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JMSF052F06+           CACTAAAATCAAAAGCTCTCAATCTACGCAAATGATTTAATTCACTAGGTAAAACCCCAA
JMSF050L03+           CACTAAAATCAAAAGCTCTCAATCTACGCAAATGATTTAATTCACTAGGTAAAACCCCAA
                      ____________________________________________________________
consensus             CACTAAAATCAAAAGCTCTCAATCTACGCAAATGATTTAATTCACTAGGTAAAACCCCAA
 
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JMSF004N07+                               TTGAGAGAGACGAGAAACGAGAGATTTCCAAACTAGGAAG
JMSF052F06+           CAAAATTATTGCCACTTGCATTGAGAGAGACGAGAAACGAGAGATTTCCAAACTAGGAAG
JMSF050L03+           CAAAATTATTGCCACTTGCATTGAGAGAGACGAGAAACGAGAGATTTCCAAACTAGGAAG
                      ____________________________________________________________
consensus             CAAAATTATTGCCACTTGCATTGAGAGAGACGAGAAACGAGAGATTTCCAAACTAGGAAG
 
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JMSF004N07+           GAATGGTTCCAGAAAGTCCCATTTGAGAGATATCTAAAGCAGTCACTCGTCGATGACGAG
JMSF052F06+           GAATGGTTCCAGAAAGTCCCATTTGAGAGATATCTAAAGCAGTCACTCGTCGATGACGAG
JMSF050L03+           GAATGGTTCCAGAAAGTCCCATTTGAGAGATATCTAAAGCAGTCACTCGTCGATGACGAG
                      ____________________________________________________________
consensus             GAATGGTTCCAGAAAGTCCCATTTGAGAGATATCTAAAGCAGTCACTCGTCGATGACGAG
 
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JMSF004N07+           AGCCACATGTGACTCCAACCCACTCACACACTGAGGAAGCATTAGACCAGTTGGTCATTA
JMSF052F06+           AGCCACATGTGACTCCAACCCACTCACACACTGAGGAAGCATTAGACCAGTTGGTCATTA
JMSF050L03+           AGCCACATGTGACTCCAACCCACTCACACACTGAGGAAGCACTAGACCAGTTGGTCATTA
                      ____________________________________________________________
consensus             AGCCACATGTGACTCCAACCCACTCACACACTGAGGAAGCATTAGACCAGTTGGTCATTA
 
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JMSF004N07+           TGATGGGACTAGTGTGTATGTTAATAGTAGATTTCAAGGCAAGAAGAGAAGACGCATCAG
JMSF052F06+           TGATGGGACTAGTGTGTATGTTAATAGTAGATTTCAAGGCAAGAAGAGAAGACGCATCAG
JMSF050L03+           TGATGGGACTAGTGTGTATGTTAATAGTAGATTTCAAGGCAAGAAGAGAAGACGCATCAG
                      ____________________________________________________________
consensus             TGATGGGACTAGTGTGTATGTTAATAGTAGATTTCAAGGCAAGAAGAGAAGACGCATCAG
 
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JMSF004N07+           CAGTAATGTTCA                                                
JMSF052F06+           CAGTAATGTTCATGGCTGAGCAAACCGTTACAGAGAATAATAATAAAGCCAGAGGAAATA
JMSF050L03+           CAGTAATGTTCATGGCTGAGCAAACCGTTACAGAGAATAATAATAAAGCCAGAGGAAATA
                      ____________________________________________________________
consensus             CAGTAATGTTCATGGCTGAGCAAACCGTTACAGAGAATAATAATAAAGCCAGAGGAAATA
 
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JMSF052F06+           ATGAAAAACATAGCTTCATCATCATTGAGAGCAATAATTGTGCGGTGTAGATAAGCAG  
JMSF050L03+           ATGAAAAACATAGCTTCATCATCATTGAGAGCAATAATTGTGCGGTGTAGATAAGCAGCC
                      ____________________________________________________________
consensus             ATGAAAAACATAGCTTCATCATCATTGAGAGCAATAATTGTGCGGTGTAGATAAGCAGCC