Contig 006738:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS038A07Sequence488006738 (3)ref|XP_009785004.1|89.4PREDICTED: uncharacterized protein LOC104233313 [Nicotiana sylvestris]
JMSF050G12Sequence529006738 (3)ref|XP_009785004.1|89.4PREDICTED: uncharacterized protein LOC104233313 [Nicotiana sylvestris]470006738 (3)ref|XP_009785004.1|89.4PREDICTED: uncharacterized protein LOC104233313 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS038A07+                               TAAATGAAGTAAAAATTTATTGATTTATTTATGTTGTTCA
JMSF050G12+                      TTTTTTTTTTAAATGAAGTAAAAATTTATTGATTTATTTATGTTGTTCA
                      ____________________________________________________________
consensus                        TTTTTTTTTTAAATGAAGTAAAAATTTATTGATTTATTTATGTTGTTCA
 
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JMFS038A07+           TGAAAATTAAAACAGAGCATATAATAAGAGTATAAAGTACAGATTTTTGAAGTAGAAATG
rJMSF050G12-                    AACAGAGCATATAATAAGAGTATAAAGTACAGATTTTTGAAGTAGAAATG
JMSF050G12+           TGAAAATTAAAACAGAGCATATAATAAGAGTATAAAGTACAGATTTTTGAAGTAGAAATG
                      ____________________________________________________________
consensus             TGAAAATTAAAACAGAGCATATAATAAGAGTATAAAGTACAGATTTTTGAAGTAGAAATG
 
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JMFS038A07+           TGTGAATAACAAAACAGTAACGCCTAGGTTCTCTTGACGGGGTCAAAGTTTGAGACGCCG
rJMSF050G12-          TGTGAATAACAAAACAGTAACGCCTAGGTTCTCTTGACGGGGTCAAAGTTTGAGACGCCG
JMSF050G12+           TGTGAATAACAAAACAGTAACGCCTAGGTTCTCTTGACGGGGTCAAAGTTTGAGACGCCG
                      ____________________________________________________________
consensus             TGTGAATAACAAAACAGTAACGCCTAGGTTCTCTTGACGGGGTCAAAGTTTGAGACGCCG
 
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JMFS038A07+           ATAATGGCGCCAAGAATGGCGGCGAGAACAACGCCGCCGGCCACGATGCTGAGCAAGAAG
rJMSF050G12-          ATAATGGCGCCAAGAATGGCGGCGAGAACAACGCCGCCGGCCACGATGCTGAGCAAGAAG
JMSF050G12+           ATAATGGCGCCAAGAATGGCGGCGAGAACAACGCCGCCGGCCACGATGCTGAGCAAGAAG
                      ____________________________________________________________
consensus             ATAATGGCGCCAAGAATGGCGGCGAGAACAACGCCGCCGGCCACGATGCTGAGCAAGAAG
 
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JMFS038A07+           TTCTTGAGGGACGGCGACACGGCGGCCTCCGCCACGTCGGGGACCACCATGGACGCCGTC
rJMSF050G12-          TTCTTGAGGGACGGCGACACGGCGGCCTCCGCCACGTCGGGGACCACCATGGACGCCGTC
JMSF050G12+           TTCTTGAGGGACGGCGACACGGCGGCCTCCGCCACGTCGGGGACCACCATGGACGCCGTC
                      ____________________________________________________________
consensus             TTCTTGAGGGACGGCGACACGGCGGCCTCCGCCACGTCGGGGACCACCATGGACGCCGTC
 
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JMFS038A07+           AACGCCGCTGCCGTCAGACCCGTGATTGCCTTTTCCTTCAAAGAAGCCGAAACTCGGAGC
rJMSF050G12-          AACGCCGCTGCCGTCAGACCCGTGATTGCCTTTTCCTTCAAAGAAGCCGAAACTCGGAGC
JMSF050G12+           AACGCCGCTGCCGTCAGACCCGTGATTGCCTTTTCCTTCAAAGAAGCCGAAACTCGGAGC
                      ____________________________________________________________
consensus             AACGCCGCTGCCGTCAGACCCGTGATTGCCTTTTCCTTCAAAGAAGCCGAAACTCGGAGC
 
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JMFS038A07+           TTCTTGCCGGAGGTTTGGTTCAGAGACGCAGCCTTTGACGGCCTCACCGGTACGGGGCTG
rJMSF050G12-          TTCTTGCCGGAGGTTTGGTTCAGAGACGCAGCCTTTGACGGCCTCACCGGTACCGGGCTG
JMSF050G12+           TTCTTGCCGGAGGTTTGGTTCAGAGACGCAGCCTTTGACGGCCTCACCGGTACCGGGCTG
                      ____________________________________________________________
consensus             TTCTTGCCGGAGGTTTGGTTCAGAGACGCAGCCTTTGACGGCCTCACCGGTACCGGGCTG
 
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JMFS038A07+           AGGAATGCGGCGGCGCTCCGCCGCAACTGCGGCTTCTGGGTGACCGTGATTGGCGCAACC
rJMSF050G12-          AGGAATGCGGCGGCGCTCCGCCGCAACTGCGGCTTCTGGGTGACCGTGATTGGCGCAACC
JMSF050G12+           AGGAATGCGGCGGCGCTCCGCCGCAACTGCGGCTTCTGGGTGACCGTGATTGGCGCAACC
                      ____________________________________________________________
consensus             AGGAATGCGGCGGCGCTCCGCCGCAACTGCGGCTTCTGGGTGACCGTGATTGGCGCAACC
 
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JMFS038A07+           GTCATCGAAGCAGAGGCCATTTCG                                    
rJMSF050G12-          GTCATCGAAGCAGAGGCCATTTCGTATATTTTTCGTTAACAAAAATCAAACCTTTTTTCC
JMSF050G12+           GTCATCGAAGCAGAGGCCATTTCGTATATTTTTCGTTAACAAAAATCAAACCTTTTTTCC
                      ____________________________________________________________
consensus             GTCATCGAAGCAGAGGCCATTTCGTATATTTTTCGTTAACAAAAATCAAACCTTTTTTCC