Contig 006735:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF049O18Sequence624006735 (2)ref|XP_006353279.1|127PREDICTED: uncharacterized protein LOC102584298 [Solanum tuberosum]738006735 (2)ref|XP_006353279.1|102PREDICTED: uncharacterized protein LOC102584298 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF049O18-                           GCATCAAATTTCGCATTCTAACCAACAGAAAGACTACATTACA
                      ____________________________________________________________
consensus                              GCATCAAATTTCGCATTCTAACCAACAGAAAGACTACATTACA
 
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rJMSF049O18-          GAGCCTAGAACTAAAGAACAGGGAAAACTCAAAAAGGCTGCCATAGCCCATAGCACAATA
                      ____________________________________________________________
consensus             GAGCCTAGAACTAAAGAACAGGGAAAACTCAAAAAGGCTGCCATAGCCCATAGCACAATA
 
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rJMSF049O18-          TGCTCCAAGATTTTCCCTTTCTTAGCACATGTTTAATCATCCTTTCTTGAAATTCCATCC
                      ____________________________________________________________
consensus             TGCTCCAAGATTTTCCCTTTCTTAGCACATGTTTAATCATCCTTTCTTGAAATTCCATCC
 
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rJMSF049O18-          TAAATTACCCTACAATTGAACATAATCGCTTACCTTAACTCTCACCCCCTTCCCCATCAA
                      ____________________________________________________________
consensus             TAAATTACCCTACAATTGAACATAATCGCTTACCTTAACTCTCACCCCCTTCCCCATCAA
 
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rJMSF049O18-          CTTCTTTGAGCTCTTGGCTGCCATTTTTTGTTTCTTCATTCCCACGAACTTCCCATCATT
                      ____________________________________________________________
consensus             CTTCTTTGAGCTCTTGGCTGCCATTTTTTGTTTCTTCATTCCCACGAACTTCCCATCATT
 
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rJMSF049O18-          GGAATCAATTCTCTGAGCTTTTCCATAATCACCATTTGTGAATATTATACCCTCAAACGA
                      ____________________________________________________________
consensus             GGAATCAATTCTCTGAGCTTTTCCATAATCACCATTTGTGAATATTATACCCTCAAACGA
 
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rJMSF049O18-          CATAACCTCTAAGCAATCATACTCGCCCTTATCAAGCACTTCCGGCGGCGGCGGCTGGCA
                      ____________________________________________________________
consensus             CATAACCTCTAAGCAATCATACTCGCCCTTATCAAGCACTTCCGGCGGCGGCGGCTGGCA
 
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rJMSF049O18-          GACCGCCGGATTAAAAGCTCTTCCACACTTGGCATTCTGACACTTGATGCAATACTTTTC
JMSF049O18+                                               CTGACACTTGATGCAATACTTTTC
                      ____________________________________________________________
consensus             GACCGCCGGATTAAAAGCTCTTCCACACTTGGCATTCTGACACTTGATGCAATACTTTTC
 
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rJMSF049O18-          GTACTCCTCAGGATACTCATATAAATAATAGCAGTAAGTACACACCGTCCAGAAGGTTCG
JMSF049O18+           GTACTCCTCAGGATACTCATATAAATAATAGCAGTAAGTACACACCGTCCAGAAGGTTCG
                      ____________________________________________________________
consensus             GTACTCCTCAGGATACTCATATAAATAATAGCAGTAAGTACACACCGTCCAGAAGGTTCG
 
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rJMSF049O18-          AAATTCCGACCCGTTCCCACCGTTGAGCTTTATATCCAGCTCTTGGTCGTACTGGGATTT
JMSF049O18+           AAATTCCGACCCGTTCCCACCGTTGAGCTTTATATCCAGCTCTTGGTCGTACTGGGATTT
                      ____________________________________________________________
consensus             AAATTCCGACCCGTTCCCACCGTTGAGCTTTATATCCAGCTCTTGGTCGTACTGGGATTT
 
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rJMSF049O18-          CCGGTCCGGGTCCGAGAGCACCCGCCAAGCCTTGGTGACGAGGCCGTAGGCCTGCTTGGA
JMSF049O18+           CCGGTCCGGGTCCGAGAGCACCCGCCAAGCCTTGGTGACGAGGCCGTAGGCCTGCTTGGA
                      ____________________________________________________________
consensus             CCGGTCCGGGTCCGAGAGCACCCGCCAAGCCTTGGTGACGAGGCCGTAGGCCTGCTTGGA
 
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rJMSF049O18-          CAAATCGTACGGATTCTCGTTAGGGTTTAAGAGGAGGGCGAGCTTCTCGTAATTGGATTT
JMSF049O18+           CAAATCGTACGGATTCTCGTTAGGGTTTAAGAGGAGGGCGAGCTTCTCGTAATTGGATTT
                      ____________________________________________________________
consensus             CAAATCGTACGGATTCTCGTTAGGGTTTAAGAGGAGGGCGAGCTTCTCGTAATTGGATTT
 
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rJMSF049O18-          GATGAGCTGACGATCGGCGGTGAAGCGAGGAACGC                         
JMSF049O18+           GATGAGCTGACGATCGGCGGTGAAGCGAGGAACGCCGAGGATCGCGTAGTAATCGGATTT
                      ____________________________________________________________
consensus             GATGAGCTGACGATCGGCGGTGAAGCGAGGAACGCCGAGGATCGCGTAGTAATCGGATTT
 
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JMSF049O18+           CTTATTCGATCCCTCGCCGGCGCCGCTGCTGATGGTGGCGGAGAAGGCGGATATCACATC
                      ____________________________________________________________
consensus             CTTATTCGATCCCTCGCCGGCGCCGCTGCTGATGGTGGCGGAGAAGGCGGATATCACATC
 
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JMSF049O18+           TGCTATGGCGATGAGCTGGCCGGGGCCCGGGTGGTCCGGGTCGGATTCCTGAGCTCGAAG
                      ____________________________________________________________
consensus             TGCTATGGCGATGAGCTGGCCGGGGCCCGGGTGGTCCGGGTCGGATTCCTGAGCTCGAAG
 
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JMSF049O18+           AGCATGTTTACGGCACTCTTCGTAGTTCTGCTTGTCGAGGAAGGACTCGGAGGATTTGAG
                      ____________________________________________________________
consensus             AGCATGTTTACGGCACTCTTCGTAGTTCTGCTTGTCGAGGAAGGACTCGGAGGATTTGAG
 
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JMSF049O18+           GAAGGCCTGAGCTCTGGAATCGGGTACGGGTCGGGCCTTGCTCCCCATCTTTGCTCTGGA
                      ____________________________________________________________
consensus             GAAGGCCTGAGCTCTGGAATCGGGTACGGGTCGGGCCTTGCTCCCCATCTTTGCTCTGGA
 
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JMSF049O18+           ATTGCAGCAGTGAGGATTGGAGGATTTGGAAATTATGGACGGTTTCGGGTCCTGAAGTTC
                      ____________________________________________________________
consensus             ATTGCAGCAGTGAGGATTGGAGGATTTGGAAATTATGGACGGTTTCGGGTCCTGAAGTTC