Contig 006733:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF042G22+                             TGAGCTGCATGGTGCCTAGCAGCTTGAGTTAGAAGACTGCGG
                      ____________________________________________________________
consensus                               TGAGCTGCATGGTGCCTAGCAGCTTGAGTTAGAAGACTGCGG
 
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JMSF042G22+           GATTGTCCTTGTCGGAGGGACTTCATGCGCAATACAAAGACATTTGCTCCCTCATCATAT
                      ____________________________________________________________
consensus             GATTGTCCTTGTCGGAGGGACTTCATGCGCAATACAAAGACATTTGCTCCCTCATCATAT
 
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JMSF042G22+           TCATCATAAGCTGCTTGCAGTTGGTGAGAAGAAAAACACTCCCCTTTGGCTGCTCTTAGA
                      ____________________________________________________________
consensus             TCATCATAAGCTGCTTGCAGTTGGTGAGAAGAAAAACACTCCCCTTTGGCTGCTCTTAGA
 
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JMSF042G22+           TTTCCCTTCTCTGTATACTTTTTGAACAATTGATCATATGATTCTCTTTTTTCATCACAC
                      ____________________________________________________________
consensus             TTTCCCTTCTCTGTATACTTTTTGAACAATTGATCATATGATTCTCTTTTTTCATCACAC
 
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JMSF042G22+           TGTCTCTTCATGTCCTCAACAACGTTTAGTTCATTGATGAGGGAATCTGAAGGGACTGTG
JMSF049L20+                      GTCCTCAACAACGTTTAGTTCATTGATGAGGGAATCTGAAGGGACTGTG
                      ____________________________________________________________
consensus             TGTCTCTTCATGTCCTCAACAACGTTTAGTTCATTGATGAGGGAATCTGAAGGGACTGTG
 
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JMSF042G22+           ATTGTCTGGTTAATATGTGAGCGATAACTATCTAAAAGTTTGTGGAGCCGAAACTGCACT
JMSF049L20+           ATTGTCTGGTTAATATGTGAGCGATAACTATCTAAAAGTTTGTGGAGCCGAAACTGCACT
                      ____________________________________________________________
consensus             ATTGTCTGGTTAATATGTGAGCGATAACTATCTAAAAGTTTGTGGAGCCGAAACTGCACT
 
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JMSF042G22+           TTGCCCAGCATCAGCAACACTTTACCAGTTTCTTCGTCATCACTCAATGATGTCTTTTCA
JMSF049L20+           TTGCCCAGCATCAGCAACACTTTACCAGTTTCTTCGTCATCACTCAATGATGTCTTTTCA
                      ____________________________________________________________
consensus             TTGCCCAGCATCAGCAACACTTTACCAGTTTCTTCGTCATCACTCAATGATGTCTTTTCA
 
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JMSF042G22+           AGAATACATTCACCCATTTCTTGTAGTGACTCTGAAAATTCATATACACTGTTTGTTGTT
JMSF049L20+           AGAATACATTCACCCATTTCTTGTAGTGACTCTGAAAATTCATATACACTGTTTGTTGTT
                      ____________________________________________________________
consensus             AGAATACATTCACCCATTTCTTGTAGTGACTCTGAAAATTCATATACACTGTTTGTTGTT
 
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JMSF042G22+           GCAGCAGCAGCAGAAAGCAATCCATCATAGCAGTCTCTCATGTCTACCATATCCTGTGTA
JMSF049L20+           GCAGCAGCAGCAGAAAGCAATCCATCATAGCAGTCTCTCATGTCTACCATATCCTGTGTA
                      ____________________________________________________________
consensus             GCAGCAGCAGCAGAAAGCAATCCATCATAGCAGTCTCTCATGTCTACCATATCCTGTGTA
 
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JMSF042G22+           GCTTGAGCTAACTCATCTGCTTGAGTCAACGATCGAATCCTACGTTCTCTTCTCTCGTGC
JMSF049L20+           GCTTGAGCTAACTCATCTGCTTGAGTCAACGATCGAATCCTACGTTCTCTTCTCTCGTGC
                      ____________________________________________________________
consensus             GCTTGAGCTAACTCATCTGCTTGAGTCAACGATCGAATCCTACGTTCTCTTCTCTCGTGC
 
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JMSF042G22+           CTAGTCGCAGCAAATCCTCGCAGTGTCTTCAATGGCGTCTTCATCATCTTCTTCTTCTTC
JMSF049L20+           CTAGTCGCAGCAAATCCTCGCAGTGTCTTCAATGGCGTCTTCATCATCTTCTTCTTCTTC
                      ____________________________________________________________
consensus             CTAGTCGCAGCAAATCCTCGCAGTGTCTTCAATGGCGTCTTCATCATCTTCTTCTTCTTC
 
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JMSF042G22+           TCTAAACGCGCACAGACCGAGACTGCGTGTGCGTCTGTGTGTGTATATATAATATCTACT
JMSF049L20+           TCTAAACGCGCACAGACCGAGACTGCGTGTGCGTCTGTGTGTGTATATATAATATCTACT
                      ____________________________________________________________
consensus             TCTAAACGCGCACAGACCGAGACTGCGTGTGCGTCTGTGTGTGTATATATAATATCTACT
 
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JMSF042G22+           CCGATTCGTATAATTATACAAGTATGTGTCAAAATCGGAACAGCGGAACAGGGAATTGCA
JMSF049L20+           CCGATTCGTATAATTATACAAGTATGTGTCAAAATCGGAACAGCGGAACAGGGAATTGCA
                      ____________________________________________________________
consensus             CCGATTCGTATAATTATACAAGTATGTGTCAAAATCGGAACAGCGGAACAGGGAATTGCA
 
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JMSF042G22+           GGCCGGTTGAATGATATCT                                         
JMSF049L20+           GGCCGGTTGAATGATATCTAAACTGTTTCGAAAATGAAAACCTAACTATAGAGACAGAGA
                      ____________________________________________________________
consensus             GGCCGGTTGAATGATATCTAAACTGTTTCGAAAATGAAAACCTAACTATAGAGACAGAGA
 
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JMSF049L20+           CCATGAAGACTTGAAGGGTCAAAAAGATGGATGCTTCGTTTACAACTGCCAACTCGTCTC
                      ____________________________________________________________
consensus             CCATGAAGACTTGAAGGGTCAAAAAGATGGATGCTTCGTTTACAACTGCCAACTCGTCTC