Contig 006732:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023D04Sequence294006732 (5)ref|XP_009624787.1|3e-08PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom
JMFS049E11Sequence610006732 (5)ref|XP_009776048.1|3e-29PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana syl
JMFS154D11Sequence615006732 (5)ref|XP_009776048.1|3e-29PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana syl
JMSF014H10Sequence564006732 (5)ref|XP_011070551.1|1e-18PREDICTED: putative late blight resistance protein homolog R1B-14 [Sesamum indi790012770 (2)ref|XP_009778116.1|2e-31PREDICTED: putative late blight resistance protein homolog R1B-14 [Nicotiana sy
JMSF049G04Sequence683006732 (5)ref|XP_009776048.1|1e-38PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana syl718012770 (2)ref|XP_009778116.1|2e-22PREDICTED: putative late blight resistance protein homolog R1B-14 [Nicotiana sy

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF049G04+ AATTNGTAGATAGACATCCCTTT
                      ____________________________________________________________
consensus AATTNGTAGATAGACATCCCTTT
 
. : . : . : . : . : . :
JMFS049E11+ ATGAAATGATATTCGATTTCCT
JMFS154D11+ ATGAAATGATATTCGATTTCCT
JMSF049G04+ TCTTGTAGAACTGGGAAACATATATCCAAACACGATACATGAAATGATATTCGATTTCCT
                      ____________________________________________________________
consensus TCTTGTAGAACTGGGAAACATATATCCAAACACGATACATGAAATGATATTCGATTTCCT
 
. : . : . : . : . : . :
JMFS049E11+ CCGACTTGAACACCTTGTTGGCCAATGTGGTTTTTCCAAGGCCAGGCATACCAAAAACTG
JMSF014H10+ CCAGGCATACCAAAAACTG
JMFS154D11+ CCGACTTGAACACCTTGTTGGCCAATGTGGTTTTTCCAAGGCCAGGCATACCAAAAACTG
JMSF049G04+ CCGACTTGAACACCTTGTTGGCCAATGTGGTTTTTCCAAGGCCAGGCATACCAAAAACTG
                      ____________________________________________________________
consensus CCGACTTGAACACCTTGTTGGCCAATGTGGTTTTTCCAAGGCCAGGCATACCAAAAACTG
 
. : . : . : . : . : . :
JMFS049E11+ AAATAACTCCATAACTGGATCCCTCCCTAAGACGTTGGATAATTATTTTTGCCTCTTCAT
JMSF014H10+ AAATAACTCCATAACTGGATCCCTCCNTAAGACGTTGGATAATTATTTTTGCCTCTTCAT
JMFS154D11+ AAATAACTCCATAACTGGATCCCTCCCTAAGACGTTGGATAATTATTTTTGCCTCTTCAT
JMSF049G04+ AAATAACTCCATAACTGGATCCCTCCCTAAGACGTTGGATAATTATTTTTGCCTCTTCAT
                      ____________________________________________________________
consensus AAATAACTCCATAACTGGATCCCTCCCTAAGACGTTGGATAATTATTTTTGCCTCTTCAT
 
. : . : . : . : . : . :
JMFS049E11+ CAAACCCTACCACATACTCTTCTTCAACTCTGGGTACCTTCTGCTGCTGCTGCAGCACAG
JMSF014H10+ CAAACCCTACCACATACTCTTCTTCAACTCTGGGTACCTTCTGCTGCTGCTGCAGCACAG
JMFS154D11+ CAAACCCTACCACATACTCTTCTTCAACTCTGGGTACCTTCTGCTGCTGCTGCAGCACAG
JMSF049G04+ CAAACCCTACCACATACTCTTCTTCAACTCTGGGTACCTTCTGCTGCTGCTGCAGCACAG
                      ____________________________________________________________
consensus CAAACCCTACCACATACTCTTCTTCAACTCTGGGTACCTTCTGCTGCTGCTGCAGCACAG
 
. : . : . : . : . : . :
JMFS049E11+ ACTGGGCAAGTTCTCGGGGCAACACTTTATCTTCGATCACTTTCTGATACTCCTTCTTGT
JMSF014H10+ ACTGGGCAAGTTCTCGGGGCAACACTTTATCTTCGATCACTTTCTGATACTCCTTCTTGT
JMFS154D11+ ACTGGGCAAGTTCTCGGGGCAACACTTTATCTTCGATCACTTTCTGATACTCCTTCTTGT
JMSF049G04+ ACTGGGCAAGTTCTCGGGGCAACACTTTATCTTCGATCACTTTCTGATACTCCTTCTTGT
                      ____________________________________________________________
consensus ACTGGGCAAGTTCTCGGGGCAACACTTTATCTTCGATCACTTTCTGATACTCCTTCTTGT
 
. : . : . : . : . : . :
JMFS049E11+ CCTGGATTACCTTGATTTCCTCGAGAATTGCTTTGATCTTTCTGGCGACCTCTCTTTTCA
JMSF014H10+ CCTGGATTACCTTGATTTCCTCGAGAATTGCTTTGATCTTTCTGGCGACCTCTCTTTTCA
JMFS154D11+ CCTGGATTACCTTGATTTCCTCGAGAATTGCTTTGATCTTTCTGGCGACCTCTCTTTTCA
JMSF049G04+ CCTGGATTACCTTGATTTCCTCGAGAATTGCTTTGATCTTTCTGGCGACCTCTCTTTTCA
                      ____________________________________________________________
consensus CCTGGATTACCTTGATTTCCTCGAGAATTGCTTTGATCTTTCTGGCGACCTCTCTTTTCA
 
. : . : . : . : . : . :
JMFS049E11+ AGGGGTAATCGAGGAAACTGGTGAACCTCTCGGCGTGGATCTTGGCGTCGACCACGTATT
JMSF014H10+ AGGGGTAATCGAGGAAACTGGTGAACCTCTCGGCGTGGATCTTGGCGTCGACCACGTATT
JMFS154D11+ AGGGGTAATCGAGGAAACTGGTGAACCTCTCGGCGTGGATCTTGGCGTCGACCACGTATT
JMFS023D04+ CGTGGACCTTGGCGTCCACCACGTATT
JMSF049G04+ AGGGGTAATCGAGGAAACTGGTGAACCTCTCGGCGTGGATCTTGGCGTCGACCACGTATT
                      ____________________________________________________________
consensus AGGGGTAATCGAGGAAACTGGTGAACCTCTCGGCGTGGATCTTGGCGTCGACCACGTATT
 
. : . : . : . : . : . :
JMFS049E11+ GGTCGATGAGGTTTTCGGAGCGGTAGACGACGTCCATGATCTCCTTCTCCAGCTGCTTCA
JMSF014H10+ GGTCGATGAGGTTTTCGGAGCGGTAGACGACGTCCATGATCTCCTTCTCCAGCTGCTTCA
JMFS154D11+ GGTCGATGAGGTTTTCGGAGCGGTAGACGACGTCCATGATCTCCTTCTCCAGCTGCTTCA
JMFS023D04+ GGTCGATGAGGTTTTCCGACCGGTACACGACGTCCATGATGTCCTTCATCAGCTGCTTAA
JMSF049G04+ GGTCGATGAGGTTTTCGGAGCGGTAGACGACGTCCATGATCTCCTTCTCCAGCTGCTTCA
                      ____________________________________________________________
consensus GGTCGATGAGGTTTTCGGAGCGGTAGACGACGTCCATGATCTCCTTCTCCAGCTGCTTCA
 
. : . : . : . : . : . :
JMFS049E11+ CGATGTCATTTTCCGTCCGGATTTTTCGGGATTCTTTGAGGAAGGACTTGAAGCCATTGA
JMSF014H10+ CGATGCCATTTTCCGTCCGGATTTTTCGGGATTCTTTGAGGAAGGACTTGAAGCCTTTGA
JMFS154D11+ CGATGTCATTTTCCGTCCGGATTTTTCGGGATTCTTTGAGGAAGGACTTGAAGCCATTGA
JMFS023D04+ CGATGTCGTTTTTGGTCCGGATTTTCCGGTACTCTTTCAGGAATGACTTGAAGCCGTTGA
JMSF049G04+ CGATGTCATTTTCCGTCCGGATTTTTCGGGATTCTTTGAGGAAGGACTTGAAGCCATTGA
                      ____________________________________________________________
consensus CGATGTCATTTTCCGTCCGGATTTTTCGGGATTCTTTGAGGAAGGACTTGAAGCCATTGA
 
. : . : . : . : . : . :
JMFS049E11+ CGAAGCGGAGGAGCTTCTTCACGTCGTCTTCTACGTCGGAGATTAGCTGGAAGTTCTCGT
JMSF014H10+ CGAAGCGGAGGAGCTTCTTCACGTCGTCTTCTACGTCGGAGATTAGCTGGAAGTTCTCGT
JMFS154D11+ CGAAGCGGAGGAGCTTCTTCACGTCGTCTTCTACGTCGGAGATTAGCTGGAAGTTCTCGT
JMFS023D04+ CGTAGCGGAGGAGCTTTTTGACGTCGTCTTTTATGTCGGAGATTAGCTGGAAGTTCTTGT
JMSF049G04+ CGAAGCGGAGGAGCTTCTTCACGTCGTCTTCTACGTCGGAGATTAGCTGGAAGTTCTCGT
                      ____________________________________________________________
consensus CGAAGCGGAGGAGCTTCTTCACGTCGTCTTCTACGTCGGAGATTAGCTGGAAGTTCTCGT
 
. : . : . : . : . : . :
JMFS049E11+ ACAGTAACTCCGTCAAGTTCTCCACCAACACGTTCACCACTGCCTCCA
JMSF014H10+ ACAGTAACTCCGTCAAGTTCTCCACCAACACGTTCACCACTGCCTCC
JMFS154D11+ ACAGTAACTCCGTCAAGTTCTCCACCAACACGTTCACCACTGCCTCCA
JMFS023D04+ ACAGTAACTCCGTCAAGTTCTCCACCAGCAAGTTCACTACCGCCTCCATT
JMSF049G04+ ACAGTAACTCCGTCAAGTTCTCCACCAACACGTTCACCACTGCCTCCATTATCTCCCTCC
                      ____________________________________________________________
consensus ACAGTAACTCCGTCAAGTTCTCCACCAACACGTTCACCACTGCCTCCATTATCTCCCTCC