Contig 006731:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF038O15Sequence680006731 (4)ref|XP_006351242.1|229PREDICTED: uncharacterized protein LOC102590318 [Solanum tuberosum]848006731 (4)ref|XP_006351242.1|238PREDICTED: uncharacterized protein LOC102590318 [Solanum tuberosum]
JMSF049F18Sequence706006731 (4)ref|XP_006351242.1|246PREDICTED: uncharacterized protein LOC102590318 [Solanum tuberosum]750006731 (4)ref|XP_007220414.1|3e-64hypothetical protein PRUPE_ppa011494mg [Prunus persica] gb|EMJ21613.1| hypotheti

Alignment

This contig is upended


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rJMSF049F18-                         ATTTGATTGGTCCATACATAGATTACATAATAAAAGTCTGAATAT
rJMSF038O15-                        AATTTGATTGGTCCATACATAGATTACATAATAAAAGTCTGAATAT
                      ____________________________________________________________
consensus                           AATTTGATTGGTCCATACATAGATTACATAATAAAAGTCTGAATAT
 
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rJMSF049F18-          TAAACAATTAGATCAACTAAGCACAAAATAGTTCATAGCCAACAAAAAATTTCCTCATTG
rJMSF038O15-          TAAACAATTAGATCAACTAAGCACAAAATAGTTCATAGCCAACAAAAAATTTCCTCATTG
                      ____________________________________________________________
consensus             TAAACAATTAGATCAACTAAGCACAAAATAGTTCATAGCCAACAAAAAATTTCCTCATTG
 
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rJMSF049F18-          TTTTCCTTGTTCACATGTAGCGTGTGCAAAATAATATTACTATTGTCTTGGTCTCCAGCA
rJMSF038O15-          TTTTCCTTGTTCACATGTAGCGTGTGCAAAATAATATTACTATTGTCTTGGTCTCCAGCA
                      ____________________________________________________________
consensus             TTTTCCTTGTTCACATGTAGCGTGTGCAAAATAATATTACTATTGTCTTGGTCTCCAGCA
 
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rJMSF049F18-          ACCCAATCCTGGACAACCTCAACATAGAGAAATTTCTCTGAAGATTGAATCTGAGATTGG
rJMSF038O15-          ACCCAATCCTGGACAACCTCAACATAGAGAAATTTCTCTGAAGATTGAATCTGAGATTGG
                      ____________________________________________________________
consensus             ACCCAATCCTGGACAACCTCAACATAGAGAAATTTCTCTGAAGATTGAATCTGAGATTGG
 
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rJMSF049F18-          AACGCTATGATGCAGCTACAGCAGATGACTTCATTTTCTTCGGTGGTGGATTACCCCCAG
rJMSF038O15-          AACGCTATGATGCAGCTACAGCAGATGACTTCATTTTCTTCGGTGGTGGATTACCCCCAG
                      ____________________________________________________________
consensus             AACGCTATGATGCAGCTACAGCAGATGACTTCATTTTCTTCGGTGGTGGATTACCCCCAG
 
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rJMSF049F18-          ATATAACCACATAGAAGTAAAAGCACAACATTGCAGCACTTATGGCAGCATAAAGGCCAG
rJMSF038O15-          ATATAACCACATAGAAGTAAAAGCACAACATTGCAGCACTTATGGCAGCATAAAGGCCAG
JMSF038O15+                                                   TATGGCAGCATAAAGGCCAG
JMSF049F18+                         AAGTAAAAGCACAACATTGCAGCACTTATGGCAGCATAAAGGCCAG
                      ____________________________________________________________
consensus             ATATAACCACATAGAAGTAAAAGCACAACATTGCAGCACTTATGGCAGCATAAAGGCCAG
 
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rJMSF049F18-          TTGGAAACACTTTCTTAGTCAATGAATAGGTCTGCACATTCTTCCATAGAAGAAAGCCAG
rJMSF038O15-          TTGGAAACACTTTCTTAGTCAATGAATAGGTCTGCACATTCTTCCATAGAAGAAAGCCAG
JMSF038O15+           TTGGAAACACTTTNTTAGTCAATGAATAGGTCTGCACATTCTTCCATAGAAGAAAGCCAG
JMSF049F18+           TTGGAAACACTTTNTTAGTCAATGAATAGGTCTGCACATTCTTCCATAGAAGAAAGCCAG
                      ____________________________________________________________
consensus             TTGGAAACACTTTCTTAGTCAATGAATAGGTCTGCACATTCTTCCATAGAAGAAAGCCAG
 
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rJMSF049F18-          CGAGTACTGCTTGGCCTAGTATAAATGGCAAGCTAGATTTTCCTTGTCTCCACACCTTCA
rJMSF038O15-          CGAGTACTGCTTGGCCTAGTATAAATGGCAAGCTAGATTTTCCTTGTCTCCACACCTTCA
JMSF038O15+           CGAGTACTGCTTGGCCTAGTATAAATGGCAAGCTAGATTTTCCTTGTCTCCACACCTTCA
JMSF049F18+           CGAGTACTGCTTGGCCTAGTATAAATGGCAAGCTAGATTTTCCTTGTCTCCACACCTTCA
                      ____________________________________________________________
consensus             CGAGTACTGCTTGGCCTAGTATAAATGGCAAGCTAGATTTTCCTTGTCTCCACACCTTCA
 
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rJMSF049F18-          AGCTAACAGTGCTGAGAGCCAGCAAAGCACCTCCAAATAGCACACCGTTACCTAGAGTAG
rJMSF038O15-          AGCTAACAGTGCTGAGAGCCAGCAAAGCACCTCCAAATAGCACACCGTTACCTAGAGTAG
JMSF038O15+           AGCTAACAGTGCTGAGAGCCAGCAAAGCACCTCCAAATAGCACACCGTTACCTAGAGTAG
JMSF049F18+           AGCTAACAGTGCTGAGAGCCAGCAAAGCACCTCCAAATAGCACACCGTTACCTAGAGTAG
                      ____________________________________________________________
consensus             AGCTAACAGTGCTGAGAGCCAGCAAAGCACCTCCAAATAGCACACCGTTACCTAGAGTAG
 
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rJMSF049F18-          TAATATTTCTTGAGAAAATAAAACCAAGCAGTCCCCCACTTAGAACAAAAGTGCCAAAGG
rJMSF038O15-          TAATATTTCTTGAGAAAATAAAACCAAGCAGTCCCCCACTTAGAACAAAAGTGCCAAAGG
JMSF038O15+           TAATATTTCTTGAGAAAATAAAACCAAGCAGTCCCCCACTTAGAACAAAAGTGCCAAAGG
JMSF049F18+           TAATATTTCTTGAGAAAATAAAACCAAGCAGTCCCCCACTTAGAACAAAAGTGCCAAAGG
                      ____________________________________________________________
consensus             TAATATTTCTTGAGAAAATAAAACCAAGCAGTCCCCCACTTAGAACAAAAGTGCCAAAGG
 
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rJMSF049F18-          GAATTCCAAAACAGAAATCATGAATTTTTGCAGCCCTTTTAGGTTGAGAGGTGATATCTT
rJMSF038O15-          GAATTCCAAAACAGAAATCATGAATTTTTGCAGCCCTTTTAGGTTGAGAGGTGATATCTT
JMSF038O15+           GAATTCCAAAACAGAAATCATGAATTTTTGCAGCCCTTTTAGGTTGAGAGGTGATATCTT
JMSF049F18+           GAATTCCAAAACAGAAATCATGAATTTTTGCAGCCCTTTTAGGTTGAGAGGTGATATCTT
                      ____________________________________________________________
consensus             GAATTCCAAAACAGAAATCATGAATTTTTGCAGCCCTTTTAGGTTGAGAGGTGATATCTT
 
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rJMSF049F18-          CTCCTGCCAGGTCACTTGTTCCTTGTAATGGATCACTTGAATTTTTTCCAGTTGCAGATT
rJMSF038O15-          CTCCTGCCAGGTCACTTGTTCCTTGTAATGGATCACTTGAATTTTTTCCAGTTGCAGATT
JMSF038O15+           CTCCTGCCAGGTCACTTGTTCCTTGTAATGGATCACTTGAATTTTTTCCAGTTGCAGATT
JMSF049F18+           CTCCTGCCAGGTCACTTGTTCCTTGTAATGGATCACTTGAATTTTTTCCAGTTGCAGATT
                      ____________________________________________________________
consensus             CTCCTGCCAGGTCACTTGTTCCTTGTAATGGATCACTTGAATTTTTTCCAGTTGCAGATT
 
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rJMSF049F18-          CTTCTAAAGCTGAAAGCGGGTTTTCTGGTCTTCCATCCTGTGGT                
rJMSF038O15-          CTTCTAAAGCTGAAAGCGGGTTTTCTGGTCTTCCATCCTGTGGTTTTAATGGATCTGTAG
JMSF038O15+           CTTCTAAAGCTGAAAGCGGGTTTTCTGGTCTTCCATCCTGTGGTTTTAATGGATCTGTAG
JMSF049F18+           CTTCTAAAGCTGAAAGCGGGTTTTCTGGTCTTCCATCCTGTGGTTTTAATGGATCTGTAG
                      ____________________________________________________________
consensus             CTTCTAAAGCTGAAAGCGGGTTTTCTGGTCTTCCATCCTGTGGTTTTAATGGATCTGTAG
 
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rJMSF038O15-          TATAGCTTAGAGCAGACTTACCCTCTACACTGGATACATCTGTGCCTCGCCCATCATTAC
JMSF038O15+           TATAGCTTAGAGCAGACTTACCCTCTACACTGGATACATCTGTGCCTCGCCCATCATTAC
JMSF049F18+           TATAGCTTAGAGCAGACTTACCCTCTACACTGGATACATCTGTGCCTCGCCCATCATTAC
                      ____________________________________________________________
consensus             TATAGCTTAGAGCAGACTTACCCTCTACACTGGATACATCTGTGCCTCGCCCATCATTAC
 
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rJMSF038O15-          TCAAACATTTAAAAACCTTGGG                                      
JMSF038O15+           TCAAACATTTAAAAACCTTGGGGCGAAGAGCAGGGGAAGGAGAGAATCGGGTGCGGAGCT
JMSF049F18+           TCAAACATTTAAAAACCTTGGGGCGAAGAGCAGGGGAAGGAGAGAATCGGGTGCGGAGCT
                      ____________________________________________________________
consensus             TCAAACATTTAAAAACCTTGGGGCGAAGAGCAGGGGAAGGAGAGAATCGGGTGCGGAGCT
 
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JMSF038O15+           GTGCACGGCGAGTTACGGAAGAGAAGCAAGACAGCTGAGAAATCGCCGACGACGACATTG
JMSF049F18+           GTGCACGGCGAGTTACGGAAGAGAAGCAAGACAGCTGAGAAATCGCCGACGACGACATTG
                      ____________________________________________________________
consensus             GTGCACGGCGAGTTACGGAAGAGAAGCAAGACAGCTGAGAAATCGCCGACGACGACATTG
 
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JMSF038O15+           CTACTGCTCTCTAAGGTCTTCGGTGGCTGCCGATCCTTCTGGGAGGAAGATCAATC    
JMSF049F18+           CTACTGCTCTCTAAGGTCTTCGGTGGCTGCCGATCCTTCTGGGAGGAAGATCAATCGCCC
                      ____________________________________________________________
consensus             CTACTGCTCTCTAAGGTCTTCGGTGGCTGCCGATCCTTCTGGGAGGAAGATCAATCGCCC