Contig 006730:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF011F19-                                             TAGATTGCAATATATCTTAATTTTT
rJMSF049C07-                                                                  TTTT
                      ____________________________________________________________
consensus                                                TAGATTGCAATATATCTTAATTTTT
 
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rJMSF011F19-          ACAATTAATAACAAAATTGTAACCAAATATCTATCCAAGAAAACATACAAAATACCAGCA
rJMSF049C07-          TCAATTAATAACAAAATTGTAACCAAATATCTATCCAAGAAAACATACAAAATACCAGCA
                      ____________________________________________________________
consensus             TCAATTAATAACAAAATTGTAACCAAATATCTATCCAAGAAAACATACAAAATACCAGCA
 
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rJMSF011F19-          CGGACTTAACTCAATGATTTAGTGGGTAGTATTTGGAATTTGGTGTAAGAAAACAAACAA
rJMSF049C07-          CGGACTTAACTCAATGATTTAGTGGGTAGTATTTGGAATTTGGTGTAAGAAAACAAACAA
                      ____________________________________________________________
consensus             CGGACTTAACTCAATGATTTAGTGGGTAGTATTTGGAATTTGGTGTAAGAAAACAAACAA
 
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rJMSF011F19-          AATTAACGTAGATCTACGATCCAAGACCCTAAAATTATTTATGCATATATATATGTGTCT
rJMSF049C07-          AATTAACCTAGATCTACGATCCAAGACCCTAAAATTATTTATGCATATATATATGTGTCT
                      ____________________________________________________________
consensus             AATTAACGTAGATCTACGATCCAAGACCCTAAAATTATTTATGCATATATATATGTGTCT
 
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rJMSF011F19-          GTATGTATAGGTGTGGGTAAATTCTTAAGCAGATCCAAGTTTACGAGGTCCAAGCCAATG
rJMSF049C07-          GTATGTATAGGTGTGGGTAAATTCTTAAGCAGATCCAAGTTTACGAGATCCAAGCCAATG
                      ____________________________________________________________
consensus             GTATGTATAGGTGTGGGTAAATTCTTAAGCAGATCCAAGTTTACGAGGTCCAAGCCAATG
 
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rJMSF011F19-          TGGTATACCCCAAAAGCGCGACGGCACAGGAGAAGGCAAGAACGCCGCCTCTTTCCCGGA
rJMSF049C07-          TGGTATACCCCAAAAGCGCGACGGCACAGGAGAAGGCAAGAACGCCGCCTCTTTCCCGGA
                      ____________________________________________________________
consensus             TGGTATACCCCAAAAGCGCGACGGCACAGGAGAAGGCAAGAACGCCGCCTCTTTCCCGGA
 
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rJMSF011F19-          GAACAACCTTGGCCAAGTACAGTGCCACGTCGGAAGTAATTTTGTCGCCGTCCTTTGCGA
rJMSF049C07-          GAACAACCTTGGCCAAGTACAGTGCCACGTCGGAAGTAATTTTGTCGCCGTCCTTTGCGA
                      ____________________________________________________________
consensus             GAACAACCTTGGCCAAGTACAGTGCCACGTCGGAAGTAATTTTGTCGCCGTCCTTTGCGA
 
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rJMSF011F19-          GGACCCGTCGGCGTTTTCCGGCGAGCGCCAGCAGCACAATGACCGTGATCCAGGTCACTA
rJMSF049C07-          GGACCCGTCGGCGTTTTCCGGCGAACGCCAGCAGCACAATGACCGTGATCCAGGTCACTA
                      ____________________________________________________________
consensus             GGACCCGTCGGCGTTTTCCGGCGAGCGCCAGCAGCACAATGACCGTGATCCAGGTCACTA
 
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rJMSF011F19-          TGGTGGTCCGGACGGCGAGAACGAGCAGCGCCGCCAGAAGGACCGCCGCCCCACACACGA
rJMSF049C07-          TGGTGGTCCGGACGGCGAGAACGAGCAGCGCCGCCAGAAGGACCGCCGCCCCACACACGA
                      ____________________________________________________________
consensus             TGGTGGTCCGGACGGCGAGAACGAGCAGCGCCGCCAGAAGGACCGCCGCCCCACACACGA
 
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rJMSF011F19-          CGGCGGCGGCGGCGCTGGATTTTTCGTAGGCGGCGGAAGAGTAGAGGATTATGGAGAAGG
rJMSF049C07-          CGGCGGCGGCGGCGCTGGATTTTTCGTAGGCGGCGGAAGAGTAGAGGATTATGGAGAAGG
                      ____________________________________________________________
consensus             CGGCGGCGGCGGCGCTGGATTTTTCGTAGGCGGCGGAAGAGTAGAGGATTATGGAGAAGG
 
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rJMSF011F19-          AAAGCAGGAGGAAGAGGAAACACGTTGTAGTCGTCGTCGTCGTTGTCTTGGTGGGTTTGG
JMSF011F19+                                              GTCGTCGTTGTCTTGGTGGGTTTGG
rJMSF049C07-          AAAGCAGGAGGAAGAGGAAACACGTTGTAGTCGTCGTCGTCGTTGTCTTGGTGGGTTTGG
JMSF049C07+                                                  TCGTTGTCTTGGTGGGTTTGG
                      ____________________________________________________________
consensus             AAAGCAGGAGGAAGAGGAAACACGTTGTAGTCGTCGTCGTCGTTGTCTTGGTGGGTTTGG
 
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rJMSF011F19-          AGGTTTTGAGGTCGGACATTGGAATCCTCTGTCGGAGAACCGCAGGATGTTTC-AGAGAG
JMSF011F19+           AGGTTTTGAGGTCNGACANTGGAATCCTCTGTCGGAGAACCGCANGATGTTTCAAGAGAG
rJMSF049C07-          AGGTTTTGAGGTCGGACATTGGAATCCTCTGTCGGAGAACCGCAGGATGTTTCAAGAGAG
JMSF049C07+           AGGTTTTGAGGTCGGACANTGGAATCCTCTGTCGGAGAACCGCANGATGTTTCAAGAGAG
                      ____________________________________________________________
consensus             AGGTTTTGAGGTCGGACATTGGAATCCTCTGTCGGAGAACCGCAGGATGTTTCAAGAGAG
 
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rJMSF011F19-          AGAGAGAGAGAGAGAGAGAGAGAGGGTGTGTT                            
JMSF011F19+           AGAGAGAGAGAGAGAGAGAGAGAGGGTGTGTTTGGTTGGGAGTGGTTTGATGGAAT    
rJMSF049C07-          AGAGAGAGAGANANANAGAGAGAGGGTGTGTTTGGTTGGGAGTGNTTTGATGGAATGAAT
JMSF049C07+           AGAGAGAGAGAGAGAGAGAGAGAGGGTGTGTTTGGTTGGGAGTGGTTTGATGGAATGAAT
                      ____________________________________________________________
consensus             AGAGAGAGAGAGAGAGAGAGAGAGGGTGTGTTTGGTTGGGAGTGGTTTGATGGAATGAAT
 
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rJMSF049C07-          AATAGTGTGT                                                  
JMSF049C07+           AATAGTGTGTAGGCAATTGGAAGGATAGTGAGCATGTGGTTGCACATGGCAAGCCTGGCC
                      ____________________________________________________________
consensus             AATAGTGTGTAGGCAATTGGAAGGATAGTGAGCATGTGGTTGCACATGGCAAGCCTGGCC