Contig 006713:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS157H11+                    TTCAGTTTAACAGGAAACTGAAACATGATCCGATTAAAGAGATCCGCGCAA
JMSF035O15+             TTTCCGGTTCAGTTTAACAGGAAACTGAAACATGATCCGATTAAAGAGATCCGCGCAA
                      ____________________________________________________________
consensus               TTTCCGGTTCAGTTTAACAGGAAACTGAAACATGATCCGATTAAAGAGATCCGCGCAA
 
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JMFS157H11+           CACAAGTCCACACAGTGTACTTTGATCATACCTTTCTCGTTTAGGGTTTAGGGTTTAGTT
JMSF035O15+           CACAAGTCCACACAGTGTACTTTGATCATACCTTTCTCGTTTAGGGTTTAGGGTTTAGTT
                      ____________________________________________________________
consensus             CACAAGTCCACACAGTGTACTTTGATCATACCTTTCTCGTTTAGGGTTTAGGGTTTAGTT
 
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JMFS157H11+           GTCAACAAAAACGAGGCTCAGATCTGTGAAATAGGGCGGAGGAGAAGCCGCACCGCCATG
JMSF035O15+           GTCAACAAAAACGAGGCTCAGATCTGTGAAATAGGGCGGAGGAGAAGCCGCACCGCCATG
                      ____________________________________________________________
consensus             GTCAACAAAAACGAGGCTCAGATCTGTGAAATAGGGCGGAGGAGAAGCCGCACCGCCATG
 
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JMFS157H11+           GCTGCAGACCTACCGGTCGCCCCGCCAAGATACGGGGCGGATCATTCCCCCACCCGGTGA
JMSF005G18+                               CCCGCCAAGATACGGGGCGGATCATTCCCCCACCCGGTGA
JMSF035O15+           GCTGCAGACCTACCGGTCGCCCCGCCAAGATACGGGGCGGATCATTCCCCCACCCGGTGA
JMSF046M01+           GCTGCAGACNTATCGGTCGCCCCGCCAAGATACGGGGCGGATCNTTCCCCCACCCGGTGA
                      ____________________________________________________________
consensus             GCTGCAGACCTACCGGTCGCCCCGCCAAGATACGGGGCGGATCATTCCCCCACCCGGTGA
 
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JMFS157H11+           ACTGAACAAAAATCCGTTTATCATCACAGCCTACACAAACATCATCACCATCAACATCAA
JMSF002D10+                                CATCACAGCCTACACAAACATCATCACCATCAACATCAA
JMSF005G18+           ACTGAACAAAAATCCGTTTATCATCACAGCCTACACAAACATCATCACCATCAACATCAA
JMSF035O15+           ACTGAACAAAAATCCGTTTATCATCACAGCCTACACAAACATCATCACCATCAACATCAA
JMSF046M01+           NCTGAACAAAAATCCGTTTATCATCACAGCCTACACAAACATCATCACCATCAACATCAA
                      ____________________________________________________________
consensus             ACTGAACAAAAATCCGTTTATCATCACAGCCTACACAAACATCATCACCATCAACATCAA
 
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JMFS157H11+           CAACAATAACAACAGAACAATAATTATATGAAGCAGCATATACAGAACTATAGAGTTAAT
JMSF002D10+           CAACAATAACAACAGAACAATAATTATATGAAGCAGCATATACAGAACTATAGAGTTAAT
JMSF005G18+           CAACAATAACAACAGAACAATAATTATATGAAGCAGCATATACAGAACTATAGAGTTAAT
JMSF010C13+               AATAACAACAGANCAATAATTATATGAAGCAGCATATACAGAACTATAGAGTTAAT
JMSF035O15+           CAACAATAACAACAGAACAATAATTATATGAAGCAGCATATACAGAACTATAGAGTTAAT
JMSF046M01+           CAACAATAACAACAGAACAATAATTATATGAAGCAGCATATACAGAACTATAGAGTTAAT
                      ____________________________________________________________
consensus             CAACAATAACAACAGAACAATAATTATATGAAGCAGCATATACAGAACTATAGAGTTAAT
 
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JMFS157H11+           TCCACTTCAGATCCCAGAGGTTGAAGTTCACAAGAACGTTTTTTCTTGGCATGAAAATGA
JMSF002D10+           TCCACTTCAGATCCCAGAGGTTGAAGTTCACAAGAACGTTTTTTCTTGGCATGAAAATGA
JMSF005G18+           TCCACTTCAGATCCCAGAGGTTGAAGTTCACAAGAACGTTTTTTCTTGGCATGAAAATGA
JMSF010C13+           TCCACTTCAGATCCCAGAGGTTGAAGTTCACAAGAACGTTTTTTCTTGGCATGAAAATGA
JMSF035O15+           TCCACTTCAGATCCCAGAGGTTGAAGTTCACAAGAACGTTTTTTCTTGGCATGAAAATGA
JMSF046M01+           TCCACTTCAGATCCCAGAGGTTGAAGTTCACAAGAACGTTTTTTCNTGGCATGAAANTGA
                      ____________________________________________________________
consensus             TCCACTTCAGATCCCAGAGGTTGAAGTTCACAAGAACGTTTTTTCTTGGCATGAAAATGA
 
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JMFS157H11+           TAAATCAAGAAGCAGAGATGAAGAAGAAGAAGAAGAAGATGAAATGGTTTCATTGTTTCA
JMSF002D10+           TAAATCAAGAAGCAGAGATGAAGAAGAAGAAGAAGAAGATGAAATGGTTTCATTGTTTCA
JMSF005G18+           TAAATCAAGAAGCAGAGATGAAGAAGAAGAAGAAGAAGATGAAATGGTTTCATTGTTTCA
JMSF010C13+           TAAATCAAGAAGCAGAGATGAAGAAGAAGAAGAAGAAGATGAAATGGTTTCATTGTTTCA
JMSF035O15+           TAAATCAAGAAGCAGAGATGAAGAAGAAGAAGAAGAAGATGAAATGGTTTCATTGTTTCA
JMSF046M01+           TAAATCAAGAAGCAGAGATGAAGAAGAAGAAGAAGAAGANGAAATGGTTTCATTGTTTCA
                      ____________________________________________________________
consensus             TAAATCAAGAAGCAGAGATGAAGAAGAAGAAGAAGAAGATGAAATGGTTTCATTGTTTCA
 
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JMFS157H11+           CAGCCAAGAAGGGTTGTTGAGTTTTGGAATTAGAAATCATCGGCATGGGAAGACGGTCAA
JMSF002D10+           CAGCCAAGAAGGGTTGTTGAGTTTTGGAATTAGAAATCATCGGCATGGGAAGACGGTCAA
JMSF005G18+           CAGCCAAGAAGGGTTGTTGAGTTTTGGAATTAGAAATCATCGGCATGGGAAGACGGTCAA
JMSF010C13+           CAGCCAAGAAGGGTTGTTGAGTTTTGGAATTAGAAATCATCGGCATGGGAAGACGGTCAA
JMSF035O15+           CAGCCAAGAAGGGTTGTTGAGTTTTGGAATTAGAAATCATCGGCATGGGAAGACGGTCAA
JMSF046M01+           CAGCCAAGAAGGGTTGTTGAGTTTTGGAATTAGAAATCATCGGCATGGGAAGACGGTCAA
                      ____________________________________________________________
consensus             CAGCCAAGAAGGGTTGTTGAGTTTTGGAATTAGAAATCATCGGCATGGGAAGACGGTCAA
 
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JMFS157H11+           CCACCCTGGAAATCCCCATCGCTCTCCCCACCCTCA                        
JMSF002D10+           CCACCCTGGAAATCCCCATCGCTCTCCCCACC-CTCATTCTCTATGCACCTCAG      
JMSF005G18+           CCACCCTGGAAATCCCCATCGCTCTCCCCACC-CTCATTCTCTATGCACCTCAGTTC   
JMSF010C13+           CCACCCTGGAAATCCCCATCGCTCTCCCCACC-CTCATTCTCTATGCACCTCAGTTC   
JMSF035O15+           CCACCCTGGAAATCCCCATCGCTCTCCCCACC-CTCATTCTCTATGCACCTCAGTTC   
JMSF046M01+           CCACCCTGGAAATCCCCATCGCTCTCCCCACCGCTCATTCTCTATGCACCTCAGTTCACC
                      ____________________________________________________________
consensus             CCACCCTGGAAATCCCCATCGCTCTCCCCACC-CTCATTCTCTATGCACCTCAGTTCACC