Contig 006711:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008L12Sequence134006711 (2)733011419 (2)ref|XP_009766110.1|1e-119PREDICTED: cationic amino acid transporter 1-like [Nicotiana sylvestris]
JMSF046I05Sequence758006711 (2)ref|XP_011085217.1|4e-91PREDICTED: cationic amino acid transporter 1-like isoform X3 [Sesamum indicum]842011419 (2)ref|XP_009766110.1|6e-109PREDICTED: cationic amino acid transporter 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF046I05+                                 TGATGAGAAAAGAATCGGGATGCTGGTTGCAGAGAGTG
                      ____________________________________________________________
consensus                                   TGATGAGAAAAGAATCGGGATGCTGGTTGCAGAGAGTG
 
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JMSF046I05+           GCCAAGTAAGATGTCCAGGANCGAGCCACTGCCGCTCCGCCGATCACATATTCCAGAAGG
                      ____________________________________________________________
consensus             GCCAAGTAAGATGTCCAGGANCGAGCCACTGCCGCTCCGCCGATCACATATTCCAGAAGG
 
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JMSF046I05+           ATGTTTCCGGCGGCTATGAAGGCCACAAAGTCACCTAACTCTACCCTTAGATACGCAAAT
                      ____________________________________________________________
consensus             ATGTTTCCGGCGGCTATGAAGGCCACAAAGTCACCTAACTCTACCCTTAGATACGCAAAT
 
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JMSF046I05+           GAACCACCNGCAACAGGGATCTCGANGGNGAACTCAGTATAGCAGAAGACAGAGAGCAAA
                      ____________________________________________________________
consensus             GAACCACCNGCAACAGGGATCTCGANGGNGAACTCAGTATAGCAGAAGACAGAGAGCAAA
 
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JMSF046I05+           GCAGAGATACCGGAGANGACGTAAGAGAGGACAACGGNGGGTCCAGCATCATCNCGCGCN
                      ____________________________________________________________
consensus             GCAGAGATACCGGAGANGACGTAAGAGAGGACAACGGNGGGTCCAGCATCATCNCGCGCN
 
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JMSF046I05+           TCCAGTCCGGTGAGAAAGAATATTCNGGCGCCGATCACGGCCCCCANGCCGAACCATATC
                      ____________________________________________________________
consensus             TCCAGTCCGGTGAGAAAGAATATTCNGGCGCCGATCACGGCCCCCANGCCGAACCATATC
 
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JMSF046I05+           AGATCCCACCATGTGAGANTCTTNTTCATGTCGTGGNTGCTCCGGGACTTGGCGGCCAGN
                      ____________________________________________________________
consensus             AGATCCCACCATGTGAGANTCTTNTTCATGTCGTGGNTGCTCCGGGACTTGGCGGCCAGN
 
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JMSF046I05+           TCCGCCTTGTNGTNGGAGCGGCTCAAAACCCGATCCACCAGCCGCGANGGAGTNTGTTTC
                      ____________________________________________________________
consensus             TCCGCCTTGTNGTNGGAGCGGCTCAAAACCCGATCCACCAGCCGCGANGGAGTNTGTTTC
 
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JMSF046I05+           AGCGCATTCACGTAGTTGCCCCAGCTCNTGAANGATTCCTCGGGGAGAAAATNGTCCTTT
                      ____________________________________________________________
consensus             AGCGCATTCACGTAGTTGCCCCAGCTCNTGAANGATTCCTCGGGGAGAAAATNGTCCTTT
 
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JMSF008L12+                                                       TGATTCTCCATTTTCT
JMSF046I05+           GTGCATGAACAAAACCGAGATNTCCTCCTCACTCNTGATGATTCTGATTCTCCATTTTCT
                      ____________________________________________________________
consensus             GTGCATGAACAAAACCGAGATNTCCTCCTCACTCNTGATGATTCTGATTCTCCATTTTCT
 
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JMSF008L12+           CCCCCCATTTTTCTCACCATTTTACTAACTGCCAAATGAACACTCGATATGATCGATCCT
JMSF046I05+           CCCCCCATTTTTCTCACCATTTTACTAACTGCCAAATGAACACTCGATATGATCGATCCT
                      ____________________________________________________________
consensus             CCCCCCATTTTTCTCACCATTTTACTAACTGCCAAATGAACACTCGATATGATCGATCCT
 
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JMSF008L12+           CTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGTGTGTGTTTATCAGAATCAGAAAC   
JMSF046I05+           CTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGTGTGTGTTTATCAGAATCAGAAACGAA
                      ____________________________________________________________
consensus             CTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGTGTGTGTTTATCAGAATCAGAAACGAA
 
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JMSF046I05+           GATACAAGTTTCTCTCCAGAAAGTATAAGAACGACTCACGTATGGAGACCAGAAGAGCTC
                      ____________________________________________________________
consensus             GATACAAGTTTCTCTCCAGAAAGTATAAGAACGACTCACGTATGGAGACCAGAAGAGCTC