| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF047J07 | Sequence | 636 | 006709 (6) | ref|XP_006360495.1| | 6e-94 | PREDICTED: mRNA cap guanine-N7 methyltransferase 2-like isoform X2 [Solanum tub | 577 | 015976 | emb|CDO99843.1| | 3e-29 | unnamed protein product [Coffea canephora] |
| JMSF016E01 | Sequence | 304 | 006709 (6) | gb|EYU19767.1| | 1e-13 | hypothetical protein MIMGU_mgv1a008792mg [Erythranthe guttata] | 737 | 007077 (3) | emb|CDO99843.1| | 4e-46 | unnamed protein product [Coffea canephora] |
| JMSF046C20 | Sequence | 746 | 006709 (6) | ref|XP_006360495.1| | 1e-96 | PREDICTED: mRNA cap guanine-N7 methyltransferase 2-like isoform X2 [Solanum tub | 801 | 006709 (6) | emb|CDO99843.1| | 4e-94 | unnamed protein product [Coffea canephora] |
| JMSF049M14 | Sequence | 689 | 006709 (6) | ref|XP_010312581.1| | 2e-116 | PREDICTED: mRNA cap guanine-N7 methyltransferase 2 isoform X3 [Solanum lycopers | 761 | 007077 (3) | emb|CDO99843.1| | 2e-56 | unnamed protein product [Coffea canephora] |
| JMSF052I11 | Sequence | 677 | 006709 (6) | ref|XP_006360495.1| | 5e-104 | PREDICTED: mRNA cap guanine-N7 methyltransferase 2-like isoform X2 [Solanum tub | 939 | 007077 (3) | emb|CDO99843.1| | 6e-78 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF046C20- AAATTCATTATTTGC
____________________________________________________________
consensus AAATTCATTATTTGC
. : . : . : . : . : . :
rJMSF046C20- TGAACAGATTATATTTTTGTTTCTTTGGCCCACCCTCAGAAGAAAACTCGGGTTGTCCCA
____________________________________________________________
consensus TGAACAGATTATATTTTTGTTTCTTTGGCCCACCCTCAGAAGAAAACTCGGGTTGTCCCA
. : . : . : . : . : . :
rJMSF046C20- GGATCAGATAGACAAAGTTAAAGGCAAAAGCACTTCCAAGCAGACTGGCACCTATTTGCT
____________________________________________________________
consensus GGATCAGATAGACAAAGTTAAAGGCAAAAGCACTTCCAAGCAGACTGGCACCTATTTGCT
. : . : . : . : . : . :
rJMSF046C20- TGGTTAAAGGTTTGTTCCCAAGTCAGCATTTATTTCAAGACCCAAAAAGACTGCCGAACT
____________________________________________________________
consensus TGGTTAAAGGTTTGTTCCCAAGTCAGCATTTATTTCAAGACCCAAAAAGACTGCCGAACT
. : . : . : . : . : . :
rJMSF046C20- AGCTAACGAAATAGAACCTTCTTTTTCAATTAAGCCTACTAGAATCATACTGATGTATCA
____________________________________________________________
consensus AGCTAACGAAATAGAACCTTCTTTTTCAATTAAGCCTACTAGAATCATACTGATGTATCA
. : . : . : . : . : . :
rJMSF046C20- GTTATGAGATTGATAATTCCAAGAATGGCTCACTTGCAAGATGTGCTTTGTACTGTGGTA
____________________________________________________________
consensus GTTATGAGATTGATAATTCCAAGAATGGCTCACTTGCAAGATGTGCTTTGTACTGTGGTA
. : . : . : . : . : . :
rJMSF046C20- TTCACTTGCCTCATCATCATTGTTTCTTCTTACTATGAATGGAGTCATCAGAGGTGGAGT
____________________________________________________________
consensus TTCACTTGCCTCATCATCATTGTTTCTTCTTACTATGAATGGAGTCATCAGAGGTGGAGT
. : . : . : . : . : . :
rJMSF046C20- AATGTCGGGATCAGGCTTTTGAAATACAAAGGTAGTGAACAGACCTAAAACATCATAGGC
____________________________________________________________
consensus AATGTCGGGATCAGGCTTTTGAAATACAAAGGTAGTGAACAGACCTAAAACATCATAGGC
. : . : . : . : . : . :
rJMSF046C20- TCTGGGAAGAAGTCTGCCCCTAGGATCAATGAGATTATGGTTCACATCTTGTAGCATTCC
____________________________________________________________
consensus TCTGGGAAGAAGTCTGCCCCTAGGATCAATGAGATTATGGTTCACATCTTGTAGCATTCC
. : . : . : . : . : . :
rJMSF046C20- TACAAATTGTGGCCTATAATCATCATAGAAATCTGTCAAGTTTTGAATCTCAATGTAATC
____________________________________________________________
consensus TACAAATTGTGGCCTATAATCATCATAGAAATCTGTCAAGTTTTGAATCTCAATGTAATC
. : . : . : . : . : . :
rJMSF046C20- AAGGCCAGCCTCTCTAGCCAACCTGATCAAGCTTGGGAAATGAACCAGACACTGAGTTTC
____________________________________________________________
consensus AAGGCCAGCCTCTCTAGCCAACCTGATCAAGCTTGGGAAATGAACCAGACACTGAGTTTC
. : . : . : . : . : . :
rJMSF046C20- TGCAGATATATCATTCGCAAACTTCATCTGGTACTTCTTTCCAAAAAAAGGAAACTTCTC
JMSF049M14+ AAAAAAGGAAACTTCTC
____________________________________________________________
consensus TGCAGATATATCATTCGCAAACTTCATCTGGTACTTCTTTCCAAAAAAAGGAAACTTCTC
. : . : . : . : . : . :
rJMSF046C20- TTCCTCAACTTCAAAAGCTATTGTGTAACTCTCAGATCTAATGCAATTGGGGACAATGTT
JMSF049M14+ TTCCTCAACTTCAAAAGCTATTGTGTAACTCTCAGATCTAATGCAATTGGGGACAATGTT
JMFF047J07+ TGTGTAACTCTCAGATCTAATGCAATTGGGGACAATGTT
JMSF052I11+ TGTGTAACTCTCAGATCTAATGCAATTGGGGACAATGTT
JMSF046C20+ GGGGACAATGTT
____________________________________________________________
consensus TTCCTCAACTTCAAAAGCTATTGTGTAACTCTCAGATCTAATGCAATTGGGGACAATGTT
. : . : . : . : . : . :
rJMSF046C20- GGG-TTTCATTCCACTGCCCTTGTTGTGGTAGGCTTCAACATTCTTCTGATACTTAGCCC
JMSF049M14+ GGG-TTTCATTCCACTGCCCTTGTTGTGGTAGGCTTCAACATTCTTCTGATACTTAGCCC
JMFF047J07+ GGGTTTTCATTCCACTGCCCTTGTTGTGGTAGGCTTCAACATTCTTCTGATACTTAGCCC
JMSF052I11+ GGG-TTTCATTCCACTGCCCTTGTTGTGGTAGGCTTCAACATTCTTCTGATACTTAGCCC
JMSF046C20+ GGG-TTTCATTCCACTGCCCTTGTTGTGGTAGGCTTCAACATTCTTNTGATACTTAGCCC
____________________________________________________________
consensus GGG-TTTCATTCCACTGCCCTTGTTGTGGTAGGCTTCAACATTCTTCTGATACTTAGCCC
. : . : . : . : . : . :
rJMSF046C20- ATATAGT
JMSF049M14+ ATATAGTAGATGAGTCAGTTGTGATACCAAGAAAATAACCACCAGGTTTCAACAAAGATG
JMFF047J07+ ATATAGTAGATGAGTCAGTTGTGATACCAAGAAAATAACCACCAGGTTTCAACAAAGATG
JMSF052I11+ ATATAGTAGATGAGTCAGTTGTGATACCAAGAAAATAACCACCAGGTTTCAACAAAGATG
JMSF046C20+ ATATAGTAGATGAGTCAGTTGTGATACCAAGAAAATAACCACCAGGTTTCAACAAAGATG
____________________________________________________________
consensus ATATAGTAGATGAGTCAGTTGTGATACCAAGAAAATAACCACCAGGTTTCAACAAAGATG
. : . : . : . : . : . :
JMSF049M14+ AAACATTATGCAATAGTTTCCTCGCTTTTTCTTCACTTTCAAAACACAGCTGTAAATTGT
JMFF047J07+ AAACATTATGCAATAGTTTCCTCGCTTTTTCTTCACTTTCAAAACACAGCTGTAAATTGT
JMSF052I11+ AAACATTATGCAATAGTTTCCTCGCTTTTTCTTCACTTTCAAAACACAGCTGTAAATTGT
JMSF046C20+ AAACATTATGCAATAGTTTCCTCGCTTTTTCTTCACTTTCAAAACACAGCTGTAAATTGT
____________________________________________________________
consensus AAACATTATGCAATAGTTTCCTCGCTTTTTCTTCACTTTCAAAACACAGCTGTAAATTGT
. : . : . : . : . : . :
JMSF049M14+ GCATGCAAAAAACAATATCAGCCTGATTGTCCTTATCCTGAAGATGCGTTTTTAAGTCTT
JMFF047J07+ GCATGCAAAAAACAATATCAGCCTGATTGTCCTTATCCTGAAGATGCGTTTTTAAGTCTT
JMSF052I11+ GCATGCAAAAAACAATATCAGCCTGATTGTCCTTATCCTGAAGATGCGTTTTTAAGTCTT
JMSF046C20+ GCATGCAAAAAACAATATCAGCCTGATTGTCCTTATCCTGAAGATGCGTTTTTAAGTCTT
____________________________________________________________
consensus GCATGCAAAAAACAATATCAGCCTGATTGTCCTTATCCTGAAGATGCGTTTTTAAGTCTT
. : . : . : . : . : . :
JMSF049M14+ CAGTGCAATGATCAATCTCAATTAACTCAGTGGTGTAAACCTTGCGCTGACTCTCCCAGG
JMFF047J07+ CAGTGCAAGGATCAATCTCAATTAACTCAGTGGTGTAAACCTTGCGCTGACTCTCCCAGG
JMSF052I11+ CAGTGCAAGGATCAATCTCAATTAACTCAGTGGTGTAAACCTTGCGCTGACTCTCCCAGG
JMSF046C20+ CAGTGCAAGGATCAATCTCAATTAACTCAGTGGTGTAAACCTTGCGCTGACTCTCCCAGG
____________________________________________________________
consensus CAGTGCAAGGATCAATCTCAATTAACTCAGTGGTGTAAACCTTGCGCTGACTCTCCCAGG
. : . : . : . : . : . :
JMSF049M14+ CTTCCTTTTTTTCATTCATTCCAGACGTGGCTACATCAATGCCAATGTAGTGACCAATTT
JMFF047J07+ CTTCCTTTTTTTCATTCATTCCAGACGTGGCTACATCAATGCCAATGTAGTGACCAATTT
JMSF052I11+ CTTCCTTTTTTTCATTCATTCCAGACGTGGCTACATCAATGCCAATGTAGTGACCAATTT
JMSF046C20+ CTTCCTTTTTTTCATTCATTCCAGACGTGGCTACATCAATGCCAATGTAGTGACCAATTT
____________________________________________________________
consensus CTTCCTTTTTTTCATTCATTCCAGACGTGGCTACATCAATGCCAATGTAGTGACCAATTT
. : . : . : . : . : . :
JMSF049M14+ GAGCTTCATCCCATTTTTCTTCGTCCGGTACTTTTCCACAATACAATTCACACACGGTGG
JMFF047J07+ GAGCTTCATCCCATTTTTCTTCGTCCGGTACTTTTCCACAATACAATTCACACACGGTGG
JMSF052I11+ GAGCTTCATCCCATTTTTCTTCGTCCGGTACTTTTCCACAATACAATTCACACACGGTGG
JMSF016E01+ TCGTCCGGTACTTTTCCACAATACAATTCACACACGGTGG
JMSF046C20+ GAGCTTCATCCCATTTTTCTTCGTCCGGTACTTTTCCACAATACAATTCACACACGGTGG
____________________________________________________________
consensus GAGCTTCATCCCATTTTTCTTCGTCCGGTACTTTTCCACAATACAATTCACACACGGTGG
. : . : . : . : . : . :
JMSF049M14+ CGTAAGGAGAGACGAAGATTTTGATGAGAGCGATTTTGACGATGTCGATGAGGCGGTGAT
JMFF047J07+ CGTAAGGAGAGACGAAGATTTTGATGAGAGCGATTTTGACGATGTCGATGAGGCGGTGAT
JMSF052I11+ CGTAAGGAGAGACGAAGATTTTGATGAGAGCGATTTTGACGATGTCGATGAGGCGGTGAT
JMSF016E01+ CGTAAGGAGAGACGAAGATTTTGATGAGAGCGATTTTGACGATGTCGATGAGGCGGTGAT
JMSF046C20+ CGTAAGGAGAGACGAAGATTTTGATGAGAGCGATTTTGACGATGTCGATGAGGCGGTGAT
____________________________________________________________
consensus CGTAAGGAGAGACGAAGATTTTGATGAGAGCGATTTTGACGATGTCGATGAGGCGGTGAT
. : . : . : . : . : . :
JMSF049M14+ GGAATGATTCGGTGGGAGGGCGGTGAGCGTAAATCGGGAATGAAGTCGCCGGAGGAATCA
JMFF047J07+ GGAATGATTCGGTGGGAGGGCGGTGAGCGTAAATCGGGAATGAAGTCGCCGGAGGAATCA
JMSF052I11+ GGAATGATTCGGTGGGAGGGCGGTGAGCGTAAATCGGGAATGAAGTCGCCGGAGGAATCA
JMSF016E01+ GGAATGATTCGGTGGGAGGGCGGTGAGCGTAAATCGGGAATGAAGTCGCCGGAGGAATCA
JMSF046C20+ GGAATGATTCGGTGGGAGGGCGGTGAGCGTAAATCGGGAATGAAGTCGCCGGAGGAATCA
____________________________________________________________
consensus GGAATGATTCGGTGGGAGGGCGGTGAGCGTAAATCGGGAATGAAGTCGCCGGAGGAATCA
. : . : . : . : . : . :
JMSF049M14+ TCGCGACGGCGTCGTCGTCTCGTCTCAGAATCCCTCCAAAAGCTCTGCTGCCGTT
JMFF047J07+ TCGCGACGGCGTCGTCGTCTCGTCTCAGAATCCCTCCAAAAGCTCTGCTGCCG
JMSF052I11+ TCGCGACGGCGTCGTCGTCTCGTCTCAGAATCCCTCCAAAAGCTCTGCTGCCGTTACACT
JMSF016E01+ TCGCGACGGCGTCGTCGTCTCGTCTCAGAATCCCTCCAAAAGCTCTGCTGCCGTTACACT
JMSF046C20+ TCGCGACGGCGTCGTCGTCTCGTCTCAGAATCCCTCCAAAAGCTCTGCTGCCGTTACACT
____________________________________________________________
consensus TCGCGACGGCGTCGTCGTCTCGTCTCAGAATCCCTCCAAAAGCTCTGCTGCCGTTACACT
. : . : . : . : . : . :
JMSF052I11+ GGTACCCGGAAAGCTATATCGCTACGATAAAT
JMSF016E01+ GGTACCCGGAAAGCTATATCGCTACGATAAATGCTCAGTGCACGACTAGAGTGTGTATTT
JMSF046C20+ GGTACCCGGAAAGCTATATCGCTACGATAAATGCTCAGTGCACGACTAGAGTGTGTATTT
____________________________________________________________
consensus GGTACCCGGAAAGCTATATCGCTACGATAAATGCTCAGTGCACGACTAGAGTGTGTATTT
. : . : . : . : . : . :
JMSF016E01+ GAGCCGGATTCACATAATTCCAT
JMSF046C20+ GAGCCGGATTCACATAATTCCATATTTCCATTCACAAAATTGTGTCGACTCACCATAATC
____________________________________________________________
consensus GAGCCGGATTCACATAATTCCATATTTCCATTCACAAAATTGTGTCGACTCACCATAATC