clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF015L11 | Sequence | 505 | 006708 (3) | ref|XP_004239021.1| | 236 | PREDICTED: uncharacterized protein LOC101259744 [Solanum lycopersicum] | 790 | 005674 (3) | ref|XP_009793987.1| | 4e-113 | PREDICTED: uncharacterized protein LOC104240797 isoform X4 [Nicotiana sylvestri |
JMSF021I22 | Sequence | 667 | 006708 (3) | emb|CDP00474.1| | 2e-127 | unnamed protein product [Coffea canephora] | 757 | 005674 (3) | ref|XP_009793987.1| | 7e-105 | PREDICTED: uncharacterized protein LOC104240797 isoform X4 [Nicotiana sylvestri |
JMSF045P16 | Sequence | 723 | 006708 (3) | ref|XP_009613079.1| | 217 | PREDICTED: uncharacterized protein LOC104106280 [Nicotiana tomentosiformis] | 674 | 016195 | ref|XP_009613079.1| | 289 | PREDICTED: uncharacterized protein LOC104106280 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF021I22+ TGAGTACGTTGCACAAGAGT
____________________________________________________________
consensus TGAGTACGTTGCACAAGAGT
. : . : . : . : . : . :
JMSF021I22+ TTCTTAATCATTGCCAACCTCTCGGGGTCAGTGATTGGACCGCCACTATCCTCATCGGTC
____________________________________________________________
consensus TTCTTAATCATTGCCAACCTCTCGGGGTCAGTGATTGGACCGCCACTATCCTCATCGGTC
. : . : . : . : . : . :
JMSF021I22+ ACTTGCATTATGGCTGCAGCTCGGGTGTTGTGTGTCCAAACCTCCCCGTTCACCACGTTG
____________________________________________________________
consensus ACTTGCATTATGGCTGCAGCTCGGGTGTTGTGTGTCCAAACCTCCCCGTTCACCACGTTG
. : . : . : . : . : . :
JMSF021I22+ CATTTTAAATTGGTGAGCACAGCGCTCACCTCAGACAGCAAACCCGGTCTATCGCTTCCT
____________________________________________________________
consensus CATTTTAAATTGGTGAGCACAGCGCTCACCTCAGACAGCAAACCCGGTCTATCGCTTCCT
. : . : . : . : . : . :
JMSF021I22+ ATTAGCTCGATCGACGTGTGGTCCATTGCTGAAGTCACGCCAACCGATCTTCTCATCGAG
JMSF015L11+ AAGTCACGCCAACCGATCTTCTCATCGAG
____________________________________________________________
consensus ATTAGCTCGATCGACGTGTGGTCCATTGCTGAAGTCACGCCAACCGATCTTCTCATCGAG
. : . : . : . : . : . :
JMSF021I22+ GATGCAAAACAAGAATCCGGGCCAAGAGACTTCATAATATAATCCAAGATTGCTTCATCT
JMSF015L11+ GATGCAAAACAAGAATCCGGGCCAAGAGACTTCATAATATAATCCAAGATTGCTTCATCT
JMSF045P16+ GCAAAGCAAGAATCCGGGCCAAGAGACTTCATAATATAATCCAAAACTGCTTCATCC
____________________________________________________________
consensus GATGCAAAACAAGAATCCGGGCCAAGAGACTTCATAATATAATCCAAGATTGCTTCATCT
. : . : . : . : . : . :
JMSF021I22+ GTTACCTTGTTTCCCTCTTGATCCGTGACATTGAAGACATCCATGAACCATCCTCCATCA
JMSF015L11+ GTTACCTTGTTTCCCTCTTGATCCGTGACATTGAAGACATCCATGAACCATCCTCCATCA
JMSF045P16+ ATTATTTTGCTCCCCTCTTGATTAGTAACATTGAAGACATCCATGAACCATCCTCCATCA
____________________________________________________________
consensus GTTACCTTGTTTCCCTCTTGATCCGTGACATTGAAGACATCCATGAACCATCCTCCATCA
. : . : . : . : . : . :
JMSF021I22+ GAGCAAATATAAGCCTTGGTAACAATAAGGTTAAGATCGGTGAGGATTTGAACCACCTCA
JMSF015L11+ GAGCAAATATAAGCCTTGGTAACAATAAGGTTAAGATCGGTGAGGATTTGAACCACCTCA
JMSF045P16+ GAGCATATATACGCCTTGGTAATAATAAGGTTAAGATCAGTAAGAACTTGTACCACCTCC
____________________________________________________________
consensus GAGCAAATATAAGCCTTGGTAACAATAAGGTTAAGATCGGTGAGGATTTGAACCACCTCA
. : . : . : . : . : . :
JMSF021I22+ AGAAGTATACCATGTTTGTTAGCACTATCCACCTGTATCACAGTGGCATTTTTGCAGGCT
JMSF015L11+ AGAAGTATACCATGTTTGTTAGCACTATCCACCTGTATCACAGTGGCATTTTTGCAGGCT
JMSF045P16+ AGAAGTGTACCGTGTTTGTTAGCACTATCCACCTGTATAACAGTGGCATTTTTGCAGGAT
____________________________________________________________
consensus AGAAGTATACCATGTTTGTTAGCACTATCCACCTGTATCACAGTGGCATTTTTGCAGGCT
. : . : . : . : . : . :
JMSF021I22+ TCATTATCAATCACAACTCTTGGTGGATTCATTCTTCTTATGAGTTTCTCATACTCATCA
JMSF015L11+ TCATTATCAATCACAACTCTTGGTGGATTCATTCTTCTTATGAGTTTCTCATACTCATCA
JMSF045P16+ TCATTGTCAATGACCACTCTTGGAGGATTCATTCTTCTGATGAATTTCTCATACTCATCA
____________________________________________________________
consensus TCATTATCAATCACAACTCTTGGTGGATTCATTCTTCTTATGAGTTTCTCATACTCATCA
. : . : . : . : . : . :
JMSF021I22+ TCCATGTTTTGTGAGTAGCTAACTGTAGCCTC
JMSF015L11+ TCCATGTTTTGTGAGTAGCTAACTGTAGCCTCCATGGAGATTCTTGAGG
JMSF045P16+ TCCATGTTCTTTGAGTAACTCACTGTAGCCTCCATTGCAATTCTTGAGGAATAGTGATCT
____________________________________________________________
consensus TCCATGTTTTGTGAGTAGCTAACTGTAGCCTCCATTGCGATTCTTGAGGAATAGTGATCT
. : . : . : . : . : . :
JMSF045P16+ GTGACACAAAGATCTCCTTGATTCTCCCGCCCCAAACAAAGACACTGTGTTGGAAATGAA
____________________________________________________________
consensus GTGACACAAAGATCTCCTTGATTCTCCCGCCCCAAACAAAGACACTGTGTTGGAAATGAA
. : . : . : . : . : . :
JMSF045P16+ GAAAAACAAAAAGCAAATCTTGACCAGGCCCCTTCTACAACCCCCCTCCCTCTAGGTATA
____________________________________________________________
consensus GAAAAACAAAAAGCAAATCTTGACCAGGCCCCTTCTACAACCCCCCTCCCTCTAGGTATA
. : . : . : . : . : . :
JMSF045P16+ AAAATTATTCAATTGCCTTGTATGCAACAGAGTTGCAGGGCACCATATAAAACACGCGCA
____________________________________________________________
consensus AAAATTATTCAATTGCCTTGTATGCAACAGAGTTGCAGGGCACCATATAAAACACGCGCA
. : . : . : . : . : . :
JMSF045P16+ GAAAACCTGCAACTTTCTAAGCACATACAGACCTTTCCTCTCCCTCCTTCCCTGTTCACT
____________________________________________________________
consensus GAAAACCTGCAACTTTCTAAGCACATACAGACCTTTCCTCTCCCTCCTTCCCTGTTCACT
. : . : . : . : . : . :
JMSF045P16+ TCCCCAGCTTTCTGAAACTCTATGCACAATACATATGCATACATGTATAGATATAAATAG
____________________________________________________________
consensus TCCCCAGCTTTCTGAAACTCTATGCACAATACATATGCATACATGTATAGATATAAATAG
. : . : . : . : . : . :
JMSF045P16+ TGTGTATGTATAGGTAGGTATGTGTGGAAACTCTTCACTCTAGCTTTCTAATTTCAGTTC
____________________________________________________________
consensus TGTGTATGTATAGGTAGGTATGTGTGGAAACTCTTCACTCTAGCTTTCTAATTTCAGTTC